intermediary metabolism Flashcards
(21 cards)
what is intermediary metabolism
- enzymatic processes in living cell
- degradation or synthesis of carb, lipid protein
- rreaction betwwen the absorption of feedstuff and excretion of end products
- energy produced in form of heat and atp
biological oxidation
- oxidative process, mainly in mitochondria
- chemical energy atp, heat, co2, h2o production
- respiratory chain
anabolism and catabolism
- metabolism is complete set of chem reactions
- catabolism: yields energy, ex: break down of food in bilological oxidation
. anabolism: uses energy to construct components o cells
metabolic pathways
- catabolism
- rate limiting step
- anabolism¨
- amphiobolic reactions
catabolism
- degradation to form energy
- large number of substrates degraded to acetyl CoA, ending up in citric cycle
- electron transport system undergo oxidative phosphorylation
rate limiting step
slowest reaction in a pathway
- detrmines rate of pathway
energy comes from? (catabolic)
- reduced molecules -> oxdized molecules + energy
- net product is atp
anabolism
- synthetic processes
- biosythesis uses common internediate like pyruvate, acetyl CoA
amphibolic reactions
involve catabolism and anabolism
three stages of energy extraction
- formation of smaller molecules
- formation of simple units
- citric acid cycle, respiratory chain and oxidative phosphorylation
formation of smaller molecules
- fats, proteins, polysaccharides
. breaking down polymers into iindividual units in gastrointestinal tract - fatty acids, glucose, amino acids
formation of simple units
- primarily acetyl CoA in different organs
-
citric acid cycle, respiratory chain and oxidative phosphorylation
- cc - NADH+H+ and FADH2 prod
- further oxidation of acetyl CoA in cc result in rc and oxp
- generating ATP
compare combustion and biological oxidation
- similarity: end products are co2 and h2o
. difference: bio ox 40% of produced energy is stored as chem energy atp - combustion heat and light is produced
two methods of producing atp from substrates
- oxidative phosphorylation - forming atp by a proton motive force
- substrate level phosphorylation - direct phosphorylation of adp from phosphorylated intermediates.
phosphoanhydride bonds
large negative free energy change of hydrolysis, thus high energy bonds
high energy bonds
- represented by ~ symbol
- ~P is a p group with high free energy of hydrolysis
- compounds with high energy bonds have high group transfer potential
- two can be removed from atp - adp - amp
function of atp and amp
- atp serve as energy source, hydrolytic cleavage related to energy requiring reaction
- amp function as energy sensor and regulator of metabolism
- amp stimulates metabolic pathways to produce atp
high energy bonds in phosphocreatine
- phosphocreatine has high energy phosphate linkage
- used in nerve and muscle cells for storage of ~p bonds
- creatine kinase catalyzes
- reversible reaction
high energy bond in thioester
- thioester forms between a carboxylic acid and a thiol group
- thioesters are high energy linkages
- can react with carboxyl in acetic acid or fatty acid
- spontaneity of thioester cleavage is essential to role of coenzyme A as acyl group carrier
energy change of phosphate hydrolysis
- phosphocreatine: -43.1 kj/mol
- thioester bonds: -31,48 kj/mol
- atp (to adp): -30.6 kj/mol