Intro to DNA Flashcards
(23 cards)
Difference between DNA and RNA
DNA is double stranded Requires DNA polymerase Thymine Histone Stable Within nucleus
Euchromatin - less coiled (white) - beads on a string
Heterochromatin - more coiled - not expressed - solenoid
Solenoid
30nm length
Nucleoside
Base and sugar
Pyrimidine
Thymine and cytosine
Nucleotide bonds
Phosphodiester bond
Secondary structure of DNA
Hydrogen bonds
DNA Strands
Complimentary
Antiparallel
Meiosis vs mitosis
Mitosis is cell division for somatic cells
1 cycle
Produce 2 diploid cells (identical)
Cell replacement
Prometaphase - spindle fibres attach to kineticore which is attached to the centromere
No crossing over
No random assortment
Meiosis
4 haploid cells
2 rounds
Prophase 1 - crossing over as chiasmata (bivalent)
Metaphase 1 - homologous chromosome align at metaphase plate forming a tetrad - random assortment
Anaphase 1- disjunction
Telophase 1 - 23 chromosomes in each cell
Endogenous mutations
Free radicals
Transposable elements
Replication errors
Bulky adduct
Bulky chemicals added on
Intercalating agents
Chemicals that from between bases which interfere with translation and transcription
Interstrand cross links
Physically link the 2 DNA strands interfering with DNA replication
Apurinic site
Complementary base lost
Deamination
C — U
DNA exonuclease
Reverse polymerase
3 prime to 5 prime
Backwards slippage
New strand loops out
New strand is one nucleotide longer
Insertion
Slows down
Huntington’s
Fragile X
Spinocerabellar ataxia
Forward slippage
Template strand loops out
New strand is one nucleotide shorter
Deletion
Replication speeds up
DNA damage too high
apoptosis
Cell cycle transition stoppped
Senescence - permanent cell cycle arrest
Base eviction repair
Uracil detected where it shouldn’t be
Removed so nucleotide is baseless
Baseless nucleotide removed
Hole filled with complementary correct nucleotide - DNA polymerase
Ligase seals DNA
Nucleotide excision repair
Pyrimidine dimers detected Surround DNA opened to form a bubble Enzyme cuts out damaged region DNA polymerase replaces the DNA lost Ligase seals
Non homologous ends joining
Bind broken ends together using ligase
May clause mutation as DNA needs to be cut for DNA ligase to work
Ends protected
Homologous directed repair
Use sister chromatids or homologous chromosome
Perfect repair
Damaged chromatid invades sister chromatid
Cut region make a copy
Regions - Holliday junctions