Introduction to antibodies and B lymphocytes Flashcards

1
Q

Describe the antibody structure

A

Consists of 4 polypeptide chains
2-identical heavy chains (~50kDa) - Alpha and beta
2-identical light chains (~25kDa) - kappa and lamda
Chains held together by S-S bonds and multiple non-covalent interactions
Glycosylated
The N terminal ~ 110 amino acid residues of the light and heavy chains = variable regions
The C terminal ~ light and heavy chains forming the constant region

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2
Q

Describe the folding and domains in light and heavy chains

A

Each segment of -110 amino acids folds to form a compact domain (3D structure/ the immunoglobulin fold), which is stabilized through a multiple noncovalent interaction and a covalent intrachain disulfide bond. Thus:
- the light chain has two domains and an intrachain disulfide bond in each of the VL and CL domains;
- the heavy chain has four domains and an intrachain
disulfide in each of the VH, CH1, CH2, and CH3
domains.
Each disulfide bond encloses a peptide loop of 60–70 amino
acid residues.

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3
Q

What is the purpose of the immunoglobulin fold

A

provides for both stability and a multiplicity of structural and functional variant which may or may not have an overt immune function e.g.

TCR, MHC molecules, cellular receptors for antibodies and adhesion molecules

These molecules belong to the immunoglobulin supergene family (IgSF)

Antibodies are prototypes of the immunoglobulin superfamily

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4
Q

What defines the immunoglobulin superfamily members?

A

There is significant amino acid sequence homology between antibody domains which is reflected in a common conformational motif, referred to as the immunoglobulin fold. This characteristic fold defines the immunoglobulin
superfamily members.

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5
Q

What are antibodies produced and secreted by?

A

B lymphocytes/Plasma B cells

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6
Q

Describe the F(ab)2 region

A

F(ab’)2 contains the antigen binding region
Antigen recognition site composed of the variable region of both the heavy and light chain
Determines both the specificity and the affinity and avidity of the interaction with antigen
Hypervariable

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7
Q

Describe the Fc (crystallisable)region

A

Fc region confirms the functional properties of antibody - only occurs in few variants - heavy chain isotypes
Allows antibody to activate immune system
The Fc region:
- Interact and is recognised by the cell surface receptor - Fc Receptor (FcR)
- binds to the first component (C1q) of the complement system to initiate the classical pathway complement cascade

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8
Q

How do antibodies act as adapter molecules for immune effector systems

A

(1) Immune complexes can activate the complement classical pathway

(2) Antibodies bound to the surface of pathogens opsonise them for phagocytosis

(3) Antibodies bound to the cells can promote their recognition and killing by NK cells

(4) Antibody bound to Fc receptors sensitises cells so that they can recognise antigen, and the cell becomes activated if antigen binds to the surface antibody

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9
Q

how many classes and sub classes of antibodies are there?

How are they similar/ differ?

A

5 classes &
9 subclasses
of antibody
(in humans)

They differ in:
- size
- charge
- amino acid sequence
- carbohydrate sequence

Similar:
All antibodies are bifunctional except IgD. They:
- recognise and bind antigens
- promote the killing and/or removal of the immune complex formed through the activation of effector mechanisms

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10
Q

what determines the antibody classes and sub classes

A

defined by the heavy chain constant region

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11
Q

Describe IgM

A

(accounts for about 10% of the serum antibody pool)
Heavy chain encoded by Mu gene with 4 CH domains
Major antibody in primary response
Monomer forms the BCR on most B cells in association with Iga and Igb chains
Pentameric; stabilised by J-chain
Low affinity but high avidity
Activates complement (Classical)

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12
Q

advantage of IgM pentameric structure

A

it provides 10 identical binding sites, which can dramatically increase the avidity with which IgM binds its cognate antigen. Given that serum IgM commonly functions to eliminate bacteria containing low affinity, polysaccharide antigens, the increased avidity provided by the pentameric structure provides an important functional advantage.

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13
Q

Describe IgG

A

(the predominant antibody isotype in normal human serum)
Monomeric, heavy chain g gene, 3 CH domains
Major circulating Ig (70-75%)
Major antibody in secondary response
4 sub-classes G1; G2; G3; G4
Can cross placenta and protect foetus
Activates complement (Classical) and Opsonin (FcR)

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14
Q

Describe IgA

A

(the predominant antibody isotype present in seromucous secretions)
Heavy chain encoded by a-gene, 3 CH domains
15-20% circulating Ig
2 subclasses IgA1 in serum IgA2 in mucous
Found in tears, milk, saliva, sweat etc
Protection of external surfaces- first line of defence
Can get localised mucosal response, different to systemic
response
Does not activate complement (by classical pathway)

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15
Q

How do IgA subclasses differ?

A

The IgA1 and IgA2 subclasses differ substantially in the structure of their hinge regions:
* the hinge of IgA1 is extended and bears O-linked
oligosaccharides;
* the hinge of IgA2 is truncated, relative to IgA1.

A deficit in the addition of O-linked sugars within the hinge region of IgA1 protein has been linked with the disease IgA nephropathy.

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16
Q

Describe IgA secretion

A

IgA dimers secreted into the intestinal lamina propria by
plasma cells bind to poly-Ig receptors on the internal (basolateral) surface of the epithelial cells.

The sIgA–receptor complex is then endocytosed and transported across the cell while still bound to the membrane of transport vesicles.

These vesicles fuse with the plasma membrane at the luminal surface, releasing IgA dimers with bound secretory component derived from cleavage of the receptor.

The dimeric IgA is protected from proteolytic enzymes in the lumen by the presence of this secretory component.

The released secretory form of IgA is relatively
resistant to cleavage by enzymes in the gut and is
comprised of:
* two units of IgA;
* J chain; and
* a secretory component (mass 70 kDa)

17
Q

Describe IgD

A

(antigen-specific receptor (mIgD) on mature B cells)
Heavy chain coded by d gene
Monomer, 3 CH domains
Expressed on the surface of B cells with monomeric IgM
<1% serum Ig
Has specific antigen binding activity but NO effector functions
Sensitive to proteolytic degradation and heat
Involved in antigen triggered B-cell differentiation

18
Q

Describe IgE

A

Heavy chain coded by e(epsilon) gene with 4 CH domains
Trace levels in serum (elevated in allergic or heavy parasitic infection)
Majority bound to mast cells and basophils through high affinity FceR1
Key to allergic response
Important role in parasitic infections, mast cells very effective at killing multicellular organisms

19
Q

Describe outcome of BCR Ligation

A

Clonal expansion: one B cell when activated becomes a clone of cells each with exactly the same BCR specificity
The majority of cells become effector/plasma cells which produce antibody
Plasma cells have a limited life-span and apoptose after a few days
A small proportion of cells remain as long-lived memory cells
Each clone secretes only one type of antibody, with a unique specificity.
The secreted antibody has the same binding specificity as the original B cell receptor

20
Q

Describe Surface bound Ig (BCR)

A

Most B cells express monomeric IgM and IgD
Both Ig have the same specificity on each individual cell
~10% of circulating B cells express IgG, IgA or IgE
Some tissue bias, e.g. mucosal B cells express IgA
Surface bound Ig has short intracytoplasmic tail and is associated with ‘accessory’ molecules to form the BCR
Iga (CD79a) and Igb (CD79b)
Ligation of the BCR results in the phosphorylation of the ITAM molecules (Immunoreceptor Tyrosine- based Activation Motifs) Leads to downstream cascade of events resulting in differentiation into plasma cell and antibody production

21
Q

Describe class switching

A

The process by which an individual B cell can link immunoglobulin heavy chain C genes to its recombined V gene to produce a different class of antibody with the same specificity.

It is mostly achieved by gene recombination

First Ab response is IgM
Secondary response is switched to other classes of Ab, especially IgG
Mutate their variable region gene sequences- somatic hypermutation
Affinity maturation
Needs T cell help, Cytokines from TH cells control the process of division, differentiation and class switching.

Class switching occurs during maturation
and proliferation

22
Q

Describe Monoclonal Antibodies Production

A
  1. Mouse infected with specific antigen - this induces production of antibodies against antigen
  2. Spleen removed and homogenized into cell suspension (B cells that produce antibodies against injected antigen)
  3. Cells from suspension are then mixed with myeloma cells
  4. These cells wold fuse and make hybridomas (hybrid cells)
23
Q

List issues with Monoclonal Antibodies

A

Most early McAb were murine
Constant region heterogeneity
Anti-antibodies
Inflammation

24
Q

Explain solutions to issues with monoclonal antibodies

A

Chimeric antibodies: Murine variable regions grafted to human constant regions
Humanised antibodies: Murine hypervariable regions grafted to human antibodies
Fully humanised antibodies: Phage display libraries (in vitro McAb) and humanised mice Ab

25
Q

what is another name for antigen binding site?

A

Paratope

26
Q

What is the paratope made of?

A

A set of complementary determining regions (CDRs)
-CDR 1/2/3
There are 3 CDRs on each domain in the Fab region, so 12 CDRs on a single antibody

27
Q

what are monoclonal antibodies

A

Cells produced from single ancestral line by repeated cellular replication

28
Q

Properties of monoclonal antibodies

A

Mono-valent- affinity (antibody binds to a single specific epitope)
production from B-cells
uniform (clones)
large quantities
highly specifc

29
Q

Immunoglobulin Superfamily

A

Each ~110 aa segment of the antibody
structure forms a domain stabilized by multiple
non-covalent interactions and a S-S bridge
Forms a loop of about 60-70 aa
Each domain has significant aa homology-
immunoglobulin fold
Allows for a stable structure and a multiplicity
of functional variants
Egs: TCR, MHC, Ab-receptors

30
Q

Why use myeloma cells in monoclonal antibody production

A

a cancerous plasma cell, that has ability to continuously grow but has lost ability to produce antibodies
Unfused spleen cells cannot grow indefinitely because of their limited life span

31
Q

Why use spleen cells in monoclonal antibody production

A

Spleen cells can produce antibodies and supply HGPRT
myeloma cells have lost the ability to synthesize hypoxanthine-guanine-phosphoribosyl transferase (HGPRT), an enzyme necessary for the salvage synthesis of nucleic acids.
Unfused myeloma cells cannot grow because they lack HGPRT and thus cannot replicate their DNA

32
Q

What are antibodies?
2 purposes of antibodies?

A

soluble glycoproteins that recognise and bind antigens

help eliminate microorganisms bearing those antigens
membrane-bound antigen receptors on B cells and play key roles in B cell differentiation -

33
Q

Where can you find antibodies?

A

in serum, tissue fluids or on cell membranes

34
Q

What advantage might there be in having such a variety of different antibody classes?

A

Each antibody isotype acts as an adapter molecule forming a bridge between the antigen and effector molecules. The immune system can respond individually to each pathogen with the generation of antibody isotypes most effective in its immobilization and elimination.

35
Q

What are the principal elements of the domain

A

The principal elements of the domain are two opposed b-pleated sheets, stabilised by one or more disulphide bonds between the b-pleated sheets. This structure is sometimes referred to as a b barrel

36
Q

How do IgA subclasses differ?

A

The IgA1 and IgA2 subclasses differ substantially in the structure of their hinge regions:
* the hinge of IgA1 is extended and bears O-linked
oligosaccharides;
* the hinge of IgA2 is truncated, relative to IgA1.

A deficit in the addition of O-linked sugars within the hinge region of IgA1 protein has been linked with the disease IgA nephropathy.

37
Q

Q. In what way do cytokines that are normally associated with TH1 responses (IFNg, IL-2) affect B cell differentiation?

A

A. IL-2 promotes B cell division. IFNg promotes affinity
maturation and class switching to IgG2a, which acts as an opsonin and fixes complement.