L16 -Genomics for Diagnosis and Disease monitoring: Examples from Haematology (Dr Andrew Mumford) Flashcards
1. Understand the broad applications of clinical genomic testing. 2. Understand that there is a detailed NHS infrastructure to ensure access to genomic testing through next generation sequencing technologies. 3. Be able to illustrate some specific examples of patient benefit from genomic testing. (111 cards)
what is genomic testing used for?
Genomic testing identifies genetic mutations, chromosomal abnormalities and hereditary cancer syndromes to diagnose conditions e.g. Down syndrome, haemophilia and polycystic kidney disease
What is down syndrome?
Trisomy 21 which is a chromosomal disorder where an individual has three copies of chromosome 21 instead of 2
What are the key features of Down Syndrome?
Characteristic facial features, intellectual disability, congenital heart defects, increased risk of leukaemia and early onsest of Alzheimerβs disease
What is haemophilia B
A blood clotting disorder caused by a mutation in the Factor IX gene on the X chromosome leading to excessive bleeding
What is the inheritance pattern of haemophilia B?
X-linked recessive (mostly affects males, while females are typically carriers)
What os Noonan syndrome?
A genetic disorder that affects multiple organs, causing short stature, congenital heart defects, facial abnormalities and developmental delays
what is the inheritance pattern of Noonan syndrome?
Autosomal dominant - a single mutation can cause the disease
What is sickle cell disease?
A genetic blood disorder where a mutation in the HBB gene leads to abnormal sickle-shaped red blood cells that cause blockages, pain and organ damage
What is the inheritance pattern of sickle cell disease?
Autosomal recessive whre both parents need to carry the mutated gene for the disease to manifest
What is polycystic kidney disease? (PKD)
A genetic disorder causing multiple cysts in the kidneys, leading to kidney enlargement and loss of function
What is the inheritance pattern of polycystic kidney disease (PKD)
Autosomal dominant where one mutated gene is enough to cause the disease
How does PKD affect kidney function?
Cysts replace normal kidney tissue reducing function and leading to kidney failure
What is acute myleoid leukaemia (AML)?
A cancer of immature blooc cells in the bone marrow, often linked to chromosomal abnormalities or gene mutations
What is lymphoma?
A cancer of the lymphatic system, affecting lymphocytes (B and T cells) with both sporadic and genetic risk factors
What is melanoma?
A skin cancer arising from melanocytes, which can be caused by UV radiation or genetic mutations (e.g. BRCA, CDKN2A or RB1 mutations)
What is adenocarcinoma of the large bowel?
A colorectal cancer that may develop sporadically (most common) or due to genetic syndromes (e.g. FAP, Lynch syndrome)
What is familial adenomatous polyposis (FAP)?
A genetic disorder caused by a mutation in the APC gene, leading to hundreds of precancerous polyps in the colon, which progress to cancer by early adulthood if untreated/
What is the difference between sporadic and hereditary colorectal cancer?
Sporadic cases occur randomly in older adults, while hereditary cases (E.g. FAP, lynch syndrome⦠) occur earlier in life due to germline mutations
What is lynch syndrome?
A hereditary colorectal cancer syndrome caused by mutations in DNA mismatch repair genes (MLH1, MSH2, MSH6 and PMS2) leading to early-onset colorectal and endometrial cancer
What is the role of APC mutations in colorectal cancer?
APC mutations lead to uncontrolled cell growth in the colon, seen in both sporadic and hereditary (FAP) colorectal cancer
What is a germline mutation?
A mutation present in sperm or egg cells, meaning it is heritable and can be passed to offspring
What is a somatic mutation?
A mutation occuring in non-reprodictive cells that cannot be inherited, often leading to sporadic cancers
How does a mutation in the RB1 gene affect cancer risk?
RB1 mutations increase the risk of retinoblastoma and melanoma, as the RB1 protein normally regulates cell division
What is the difference between germline and somatic mutations?
Germline mutations occur in egg or sperm cells and are inherited by all cells in the offspring while somatic mutations occur after birth in specific cells and are not inherited