L5 - Limitless Replicative Potential Flashcards

(55 cards)

1
Q

Why is C.elegans a useful model system

A

We know the lineage of all 959 cells

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2
Q

Cells appear to count …

A

The number of population doublings (generations)

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3
Q

What did Hayflick demonstrate?

A

That cells dont grow forever

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4
Q

Describe the graph whe looking at the number of population doublings

A

S shaped graph

Initailly (1) slow cell growth 
Then rapid (phase 2) cell growth 

Cells then reach a point of senescence (this is known as the Hayflick limit) where cells NO LONGER DIVIDE

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5
Q

How many population doublings does it take to reach the Hayflick limit

A

Around 60

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6
Q

What can be seen if take cells from older donors regarding the doubling number

A

Doubling number tends to decline with age

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7
Q

What would be seen if you take cells that have doubled say 30 times and then freeze them …

What conclusions can be made from this

A

That cells will only go through another 30 divisions before they begin to senesce

In other words the cells remember where they are … and always bein to senesce at the same cumulative number of days

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8
Q

What gene can be used to overcome the senescence block

A

SY40 large T antigen

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9
Q

Describe how the large T gene could be introduced into cells in a way that it could be easily turned on

A

Transfect cells with a plasmid containing the large T gene

Use an inducible promotoer - e.g. glucocorticoid and then add dexamethasone

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10
Q

Give an example of a compund that would actvviate a glucocorticoid pormoter

A

Dexamethasone

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11
Q

Once dexa has been added how can you verify that transfection has occured

A

Add dex and detect large T through immunoblotting

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12
Q

Describe what happens to cells in the presence of dex

A

Cells grow as normal until the crisis point - many die but around 1 in 10 emerge and are now immortalised

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13
Q

Describe what happens to the cells if dex is taken away at any time

A

Cells senesce

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14
Q

The fact that cells senesce at any time if dex is withdrawn suggests what?

A

There must be a second block to immortal cell growth

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15
Q

Cance cells must become ______ for

A

Immortal for tumours to form

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16
Q

How many cells are required in a tumour for it to be fatal?

A

10^12

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17
Q

Why is the fact that 10^12 cells are needed for a tumour to be fatal strange?

A

This is ONLY 40 doublings and is well below the Hayflick limit

WHAT then is the point of senescnce??

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18
Q

What is the real story of how cells grow in a tumour

A

Alot of cell death - not true exponential cell growth

After 12 doublings there are around 5 cells not 2048

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19
Q

What are the reasons for the huge ammount of cell death within tumours

A

Deprivation of growth factors
Lack of vasculature
Deprivation of oxygen

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20
Q

What assay may be performed to detect cells underogiing apoptosis and their progression through apoptosis

A

Tunnel assay

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21
Q

Describe how the tunnel assay works

A

Enzyme that recognises chromosomal fragmentation - label with a flurophore
More fragmentation that occurs means the cells is further into apoptosis

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22
Q

Levels of what protein increases as the Hayflick limit is approached?

How can this be visualised

A

P16
P21

Western Blotting

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23
Q

Describe the actin cytoskeleton in normal cells and senescent cells

A

See a huge increase in the number of stress fibres in senescent cells

24
Q

What is the effect of transfecting P16 into early human endometrial fibroblasts

A

Increase in stress fibres

Now has the morphology of a late cell

25
Describe the effect on senescence of the elimination of p53
Decrease in p53
26
How was p53 eliminated
Expose to a virus encoding a p53 siRNA
27
How was p53 knockdown confirmed
Using western blot
28
What were the results of p53 knockdown On P21 and p16 On the ammount of cells going through apoptosis
Decrease in P16 p21 Decrease in the number of cells going through apoptosis
29
What is the function of P16
Binds to the catalytic of cdk4 and cdk6 Tweaks the regions to prvent ATP binding - so now no longer able to function as a kinase
30
Where does p16 act
At the restriction point
31
Where does p21 act
At the G1/S transition
32
What is the function of both Cdk4 and cdk6 So what occurs if they are inhibited by P16/21
Phosphorylation of Rb --> leads to the expression of E2F target genes - without this Rb not phosphorylated and E2F genes not transcribed
33
What is the action of P16 and P21 dependent on What happens in cells when this critical component of the pathway is missing?
function of Rb Where there is no Rb - senescence is not possible
34
What provides a basis for the ability of a cell to count its divisions
Teleomers
35
What is the function of telomeres
Prevent cell death from arising due to chromosomal end-to-end fusion
36
Describe how you could test the absence of chromosomes
Deletion of essential telomere protein TRF2
37
What is the results of a deletion of Trf2
Loss of telomeres Chromosomes join together with multiple centromeres Problems during segragation - breakage occurs at molecular weak points End result is chromosomal end swapping
38
What are telomeres composed of
Hexomeric repeates of TTAGGG | Gives a G and C rich strand
39
What strand provides the single strand overhang
3' G rich strand
40
How to telomers preserve chromosomal integrity
Looping able to occur - 3' end tucked up into a loop | T-LOOP forms
41
How then are telomeres able to function as a clock
Their is leading and lagging strand synthesis At the 5' end - lagging strand, RNA primer doesn't quite fit perfectly so at the end of every cycle the telomere will shorten
42
Describe how you would measure chromosomal end shortening
Extract chromosomal DNA Restrict with multiple enzymes that do not target TTAGGG Run DNA electrophoresis Transfer to membrane Label with DNA probe antisense to the telomere Souther blotting - visuaise with AUDIORADIOOGRAPHY
43
What can be seen regarding the length of telomeres and time
Telomere length shortens as a function of time
44
What is responsible for the replication of telomeres
Telomerase
45
What is telomerase
``` A DNA polymerase of the reverse transcriptase class RNA --> DNA ```
46
What is unique about telomerase
It has its own template
47
What could be used to measure telomerase activity
TRAP assay
48
What can be said of the telomerase activity of an immortal cell
Has increased telomerase activity
49
What is hTERT
The catalytic subunit of telomerase reverse transcriptase
50
What may be avoided by expressing HTERT in cells
Crisis may be avoided
51
Describe how telomerase activity could be targeted for therapeutic benifit
Tumour cell growth can be blocked by interfering with telomerase function If immortalisation via telomerase expression is important for tumorigenesis Cancer cell proliferation might be blocked by interfering with telomerase activity
52
What correlation was seen following transfection of HTERT
Length of time following transfection to see an inhibition of cell growth is a function of the length of the teleomeres in cells
53
What cancer types can telomerase expression be used as a prognostic marker for
Neuroblastoma and Ewings Sarcoma
54
What is seen in cancers that have negative/low telomerase levels
Prognosis is quite good
55
Why s it the case that many neuroblastomas fail to transit to immortality
Early neuroblastomas have not yet gone through crisis | So ... many neuroblastomas dont transit to immortality