Lab tests in primary care Flashcards

1
Q

Sensitivity

A

The ability of a test to correctly identify those who have the disease “true positive rate”

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2
Q

Specificity

A

The ability of a test to correctly identify those who do not have the disease “true negative rate”

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3
Q

Positive predictive value

A

Describes the likelihood that a person whose test shows a positive result, actually has the disease

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4
Q

Negative predictive value

A

Describes the likelihood that a person whose test showa a negative result does not have the disease

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5
Q

How to estimate PPV?

A

Demographics (age, sex) , risk factors, symptoms and signs, past medical history

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6
Q

What are the criteria for typical anginal pain?

A

1) retrosternal 2) exercise or stress related 3) relieved by nitro

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7
Q

Atypical angina

A

Two criteria

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8
Q

Non-anginal

A

one criterium

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9
Q

DM screening

A

Pat should be screened at 3-year intervals beginning at age 45y. Should be considered at an earlier age / more often if increased risk.

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10
Q

Risk factors of DM

A
  • Family history of DM
  • Overweight defined as BMI > 25kg/m2
  • Habitual physical inactivity
  • Belonging to high risk ethnic/ racial group: Pacific islanders, american-indians, african-american, asian-american, hispanic
  • Previously identified IFG or IGT
  • HT
  • Dyslipidemic
  • History of GDM or delivery of a baby weighing > 4kg
  • PCOS
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11
Q

Abnormal test result in DM

A
  • Further MX: glycemic, cholesterol, troponin, Ig´s
  • Pat: 1) suspected disease 2) presence of sx 3) screening
  • Results: ask how much abnormal?
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12
Q

Biologic variables that affect test results

A
  • Biologic rhythms: circadian(daily), ultradian (24h), infradian (longer like menstruation)
  • Constitutional factors: age, gender, genotype
  • Extrinsic factors: 1) Posture 2) Exercise 3) Diet (caffeine) 4) Drugs 5) Alcohol 6) Pregnancy 7) intercurrent illness
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13
Q

What to do with abnomal test result?

A
  1. Test repating
  2. Other tests ordering
  3. Specialist / hospital referral
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14
Q

What is included in lab staff?

A

Clinical pathologist, microbiologist, hematologist

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15
Q

PCR

A
  • Genetic material, DNA and RNA
  • Is a type of nucleic acid amplification technology
  • Improved Dx in virology, slow growing and fastidious organisms
  • Polymerase is an enzyme that catalyses formation of nucleotides into DNA molecules before cell division, or RNA before protein synth
  • Used for: bacterial inf, parasite, virus ass w cancer, HIV, genetic disorders (DM, breast ca), disorders of blood (thalassemia), muscle disorders
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16
Q

ESR

A
  • Blood components separate faster in illness
  • Determined by the effect of serum proteins on the neg. electric charge on the erythrocyte surface
  • A marker of inflammation and malignant disease
  • Presence of all acute phase proteins (esp. fibrinogen) as well as Ig
  • Should be used for asymptomatic pat to screen for presence of disease
  • Lag phase of 24-48h btw onset of inflammation and production of proteins increasing ESR. Also delay after resolution
  • Norm is <20 mm/h, (adult male 17-50y = 1-10, >50y = 2-15 / female 17-50y = 3-12, >50y = 5-20)
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17
Q

What may be suspected in very high ESR, 100++

A

Giant cell arthritis, MM, TB, polymyalgia rheumatica, deep abscess, endocarditis, osteomyelitis

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18
Q

Low ESR <1

A

Idiopathic, sickle cell, polycythemia, CHF, hypofibrinogenemia, high WBC, NSAIDs, old specimen, low serum protein (CKD, liver disease)

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19
Q

Very high ESR + normal CRP

A

May indicate giant cell arteritis or polymyalgia rheumatica

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20
Q

CRP

A
  • Product of acute-phase response, tissue inflammation
  • Non-specific marker of inflammation and neoplastic disease
  • Rise within 6h, double every 8h, reaching peak at 50h
  • Can fall very rapidly but resolve w 24h half life
  • > 100mg/L have 80% sens & 88% spec for bacterial inf
  • 10-40mg/L has sens 69% and 54% spec for viral inf
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21
Q

Rules of inflammation in CRP

A

< 10 is norm (5 i Norge)
4-10 = mild
10- 20 = moderate
> 40 = marked

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22
Q

What can one use CRP for ?

A

1) Response to Tx 2) Activity of disease

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23
Q

What is CRP not affected by ? (unlike ESR)

A

Pregnancy

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24
Q

What test do you use for Adenovirus

A

Serum Ab levels, PCR for feces and resp specimen

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25
Cat-scratch disorder
Serum Ab
26
VZV
Clinical Dx, blood w Abs/ PCR or culture from vesicle
27
HSV
PCR of genital lesions
28
Chlamydia pneumonia
Blood sample w Ab
29
Chlamydia trachomatis
Swabs or endotracheal aspirate for culture and PCR or urine sample
30
Clostridium dificile
Fresh feces, toxin and culture
31
CMV
blood sample Abs
32
EBV
Blood film (?), mono spot & Paul Bunnell, Abs to viral capsule
33
Hep
Blood for immunoassay for Abs and HBV Ag, PCR for viral load w HBV/HBC, genotyping to see tx benefit
34
HIV
Blood abs for HIV1 and HIV2, detuned ELISA-> time of infection, CD4 count, HIV viral load
35
Influenza
Blood Abs 2-4w serum. Has low sens and unhelpful for tx as Dx is retrospective. PCR of nasal swabs
36
Mumps
Blood abs -> decide immune status and IgM assay | - IgG in CSF= meningitis
37
Mycoplasma pneumonia
blood abs, IgM
38
Parvivirus B19
blood abs, suspected 5th disease
39
Pat w fine maculopapular rash. Serology can be performed for the following:
Measles (IgM), Rubella, Parvovirus B19, Echovirus, EBV, CMV, (Ross river virus, Barmah forrest virus) Dengue fever
40
N. gonorrhea
Culture (urethral, cervical, rectal, pharyngeal), PCR on swabs or urine
41
Syphilis
Serology ( RPR, TPHA, FTA-ABS, EIA)
42
Trichomonas
Microscopy from vaginal swab
43
Lymphogranuloma venerum
Chlamydia serology, LN biopsy
44
Chancroid
Microscopy/culture for Hempphilus ducrei
45
Granuloma inguinale (Klebsiella)
biopsy
46
UTI
- WBC > 10 pr uL is abnormal = local inf - Higher counts have greater significance - Epithelial cells = possibly contamination in female - Culture: >10^5 per mL are more significant
47
Serum level of iron decrease
Falls gradually below normal when iron in body decrease after reserves bc exhausted. Level of transferrin then increase (iron transport)
48
Norm iron
14-30 umol/L
49
Transferrin
A carrier protein that binds most of the iron in serum. TIBC = total iron binding capacity = total amount of iron that can be bound to serum protein
50
Transferrin saturation
Which extent the iron binding sites on transferrin are occupied by iron 20-50 % (markedly elevated in hemochromatosis)
51
Serum Fe
Direct relationship to the amount of iron stores in the body. 20-250ug/L in males and 10-150 in female
52
Liver function tests
Consists of plasma bilirubin, albumin, plasma transferase, plasma alkaline phosphatase( ALP), gamma-glutamyl-transferase (GGT)
53
Increased plasma bilirubin
Unconjugated: breakdown of RBC Conjugated: after metabolism in liver
54
Albumin
Transport protein produced in liver and maintains oncotic pressure. Has half life of 20 days. Norm 3,5-5,5 g/dL. Reduced w advancing liver disease, nephrotic sd, protein loosing enteropathy, malnutrition, and some inflammatory diseases. Elevation is unusual except in dehydration.
55
ALP
Present on surface of hepatocyte and in bile canaliculi and duct. Not specific to liver, but indicator of cholestasis = obstruction, infiltration and cirrhosis
56
GGT
Present in bile canaliculi. Raised w cholestasis, other liver disease and drug/ alcohol intake
57
Acute hepatitis jaundice
ALP norm to <3 x norm and ALT/AST 10-100x normal
58
Obstruction jaundice
ALP >3x norm, ALT/AST <10 x norm
59
Alcohol abuse
1) GGT limited sens/spec 2) MCV: macrocytosis but limited sens/spec 3) Carbohydrate deficient transferin
60
TFT
- TSH have high sensitivity - T3 = serum free tri-iodothyrine - T4 = thryoxine - TPO-anti = thyroid peroxidase antibodies - Anti-thyroglobulin abs - Thyroxine-binding globulin and thryoglobulin
61
Hypernatremia
>145mmol/L Causes: Water depletion (DI), diarrhea, corticosteroid excess, excess IV hypertonic Na solution Clinical: thirst, confusion, oliguria, orthostatic hypotension, muscle twiching/cramps, seizure, delirium, hyperthermia, coma
62
Hyponatremia
<135mmol/L Causes: Water retention, kidney failure, GI loss (diarrhea/ vomiting), drugs/diuretics/ACEi Clinical: lethargy, confusion, mental change, convulsions, coma, death
63
Elevated amylase
Pancreas: Acute/chronic pancreatitis, pseudocyst, cancer, trauma Nonpancreatic: Salivary glans disorder, intestinal perforation/ischemia/obstruction, DKA, perforated peptic ulcer, ruptured ectopic pregnancy, renal failure, macroamylasemia, pregnancy
64
Elevated lipase
Acute/chronic pancreatitis, DKA, small bowel oust., acute cholecystitis(!) , renal failure
65
BUN
7-18 mg/dL. Elevated in hypovolemia, increased protein intake, corticosteroid use, hyper catabolism, GI bleed Renal function: - 10:1 suggest intrinsic renal pathology - >20: 1 suggest prerenal or postern cause. Reduced in severe liver disease, malnutrition, SIADH
66
ANA very useful for dx of
SLE, systemic sclerosis
67
ANA somewhat useful for dx of
Sjögren, polymyositis-dermatositis
68
ANA useful for monitoring Px
Drug associated lupus, MCTD, autoimmune hepatitis
69
ANA not useful or has no proven value for Dx, monitoring or Px in
RA, MS, thyroid dis, inf, ITP, fibromyalgia
70
Hyperkalemia
K>5mmol. Causes: Kidney failure, acidosis, Addison, excessive intake of K, drugs (spironolactone, ACEI, NSAID) Clinical: muscle weakness, flaccid paralysis, cardiac arrest, peaked T-wave on ECG, decreaset QT, increased PR -> arrhythmia
71
Hypokalemia
<3,5. Causes: kidney disease, GI loss (V/D), alkalosis, mineralocorticoid excess, loss in ECF > ICF ( burns, trauma) decreased intake, drugs (furosemide, thiazide) Clinical: Lethargy, muscle weakness, cramps, confusion, flaccid paralysis, tetany, coma,