Lecture 2 Flashcards

Measurement of ligan affinity & Radioligand

1
Q

Define Hill langmuir equation ?

A

predict relationship between receptor occupancy
PAR =[A]/Ka+[A]

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2
Q

The rate of association

A

K+1

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3
Q

The rate of dissociation ?

A

K-1

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4
Q

The overall dissociation rate constant ?

A

Ka= k-1/k+1

gives the measure of affinity of agonist for a receptor

how well agonist is able to bind to receptor

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5
Q

How does receptor occupancy relate to tissue response ?

A

once activated this triggers a response which can be seen and measured by
CONC REPONSE CURVES

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6
Q

Define Agonist ?

A

A substance that binds to receptors that activates it and causes a biological response

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7
Q

What are concentration response curves ?

A

Force of contraction by different concc of agonists

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8
Q

Hill equation ?

A

memorise

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9
Q

What is EC50 ?

A

the maximum response at 50 %

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10
Q

What does the Hill equation measure ?

A

Relationship between tissue concentration VS agonist concentration

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11
Q

What does the Hill-langmuir equation measure ?

A

Meaures the relationship between the AGONIST -RECEPTOR occupancy VS agonist concentration

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12
Q

Why do we get dissconect between tissue response & agonist occupancy ?

A

additional response –> agonist efficacy
Maybe because it causes changes in receptor and then activates receptors to induce tissue response

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13
Q

What is efficacy ?

A

the strength to invoke a response and produce maximal reponse

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14
Q

Define Antagonist ?

A

bind to receptor & do nothing they prevent agonist from binding

only governed by affinity
only association/dissocation

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15
Q

Agonist VS antagonist

A

Both compete for the binding site

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16
Q

How does competative antagonism work ?

A

its surmountable so if there is enough agonists there able to overcome by increasing the conc
causes a shift to the right but NO CHANGE to dose ratio

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17
Q

How to determine affinity for competative antagonist ?

A

1.Schild analysis :dose response curves
2.Radiologand binding assay :directly measuring affinity using radiolablled antagonist

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18
Q

What does parallel shift mean ?

A

i think it assumes the response in absence &presence of antagonist =SAME then n
the no of receptors occupied by agonist must be same
the if increase conc of agonist in order to overcome antagonism thats present caused by antagonist

19
Q

Schilds equation ?

A

predicts parallel shift in conc response curve that is constant r for any given antagonist concentration [B] or dissociation constant Kg

r-1 = [B]/Kb

20
Q

What does the dissociation constant (Kb) tell us ?

A

Kb=physiochemical constant
Kb=same for a given receptor & drug combo in any tissue ,any species as long as the receptor is the same

21
Q

What can we use Kb for when considering the definiton ?

A

Used to identify receptors within a tissue
varies with receptor types
Quantitaviley compare the affinity of diff drugs on same receptor (varies with diff drugs)

22
Q

What does a radioligand binding assay do ?

A

2nd technique to identify the affinity for competative antagonist

to compae drugs

23
Q

What can the radioligand bining studies tell us ?

A

1.measuring conc of bound receptors (RECEPTOR DENSITY)
2.measure dissociation constant (AFFINITY) of radiolabelled antagonists

24
Q

What is needed for a radioligand assay ?

A
  1. source of receptor ligand a highly specific radiolabeeled ligand
    2.Source of receptors -potential target tissues
25
What is radiolabelling ?
chemical reaction introducing radioactive isotopes to compound these radioligands should have increased specificity activity so small quanitities can me measured
26
How is the tissue used in it ?
homogenized and seperated in aaliquots containing some amounts of the sample Aliquots=increased conc of radiolabelled so increased binding Reach saturation as limited no of receptors
27
The incubation stepof radioligand binidng ?
adding radioligand -crucial step IN-VITRO (in test tubes) Conditions need to be optimised to ensure eqm reached between receptor & radioligand
28
What are external factors of radio ligand binding assay ?
* PH,temp,salt conc * enzymes released as they may degrade * Duration of incubation of tissues with the radio ligand
29
The FILTRATION part of radio ligand binding assay ?
add excess so all is covered some radioligand must be removed as its not bound before measuring do 3 types -millipore filtration -column chromatograohy -EQM dialysis
30
Then measure radioactivity ? | of radio ligand binding assay
corrrelate with the amount of receptors increase levels of radio ligand =increased amount of receptors =UNTIL PLATEAU
31
How does Millipore filtration work ?
-very small pores only small molecules pass through (RL free complexes) not big (RL receptor complex) sample is loaded onto filter and ligand washed away after few succesive centrifugations
32
How does column chromatography work ?
-sample lloaded on column and traps small molecules (RL free comples) instead of big -bigger molecules can pass through freelu centrfugation can be used to pellet
33
How deos filttration centrifugation work ?
a process that is used to separate or concentrate contaminants suspended in a liquid medium. A centrifuge will spin the oil at high rotational speeds and separate the particulates from the liquid.
34
What is equilibrium dialysis ?
-based on osmosis -sample in membrane (pores)allows exchange of smallmolecules between smaple and buffer surrounding -free RL diffuses to surrounding buffer leaving the bound ligand inside
35
How are the results of radio ligand binding assay interpreted ?
only those who bind to specific receptors CRITERIA 1.Specificity 2.Saturability 3.Reversibility 4.Bio relevance
36
Define Specificity ?
Ligand must bind to receptor only unlabelled will eplace labelle in all receptro sites if not replaced 1.interaction not reversible 2.non specific binding can be saturated if interaction is meaured = decreased radioactivity or 0
37
Define Saturbility ?
finite no receptors Increased ocn of RL receptors to fixed conc of tissue sample = icreased receptor binding once all binded to receptors =additon of RL means no binding
38
Define Reversibility ?
binding is reversible allows competition for receptor binding sites labelled and not labelled ligands
39
What is competative binding assay ?
binding of radiolabelled ligand (fixed conc) decreases as non-labelled ligand conc increases
40
What is KL ?
measure of dissociation constant of radiolabelled ligand (affinity)
41
How do we measure bio availability ?
in vitro only 1 part of process 1.not represent physiological environment 2.dont know stability -injested 3.Drug metabolism 4.Drug absorption 5.Stability diff in phys environment
42
What are some risks ?
when homogenised other proteins are exposed prod non-specific binding conditions some ligans bind to glass tube causes curve to never saturate due to extra binding sites
43
How to overcome risks ?
Must consider 2 properties 1.binding interaction of ligand receptor =DYNAMIC ligand-receptor complex =REVERSIBLE 2.limite amount of receptor in our prep