Lecture 2 & 3 DNA intro Flashcards

(29 cards)

1
Q

what are DNA 3 functions?

A

(SRM)
1. store info
2. replicated
3. mutates

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2
Q

what is the central dogma ?

A

DNA (TRANSCRIPTON
RNA (REPLICATION AND TRANSLATION)
Protein

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3
Q

what initiates gene expression

A

transfer of info

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4
Q

what is a semi conservative model?

A

same 1 double dna strand converts to
1. 2 dna both with a new dna strand and an old dna strand
2. after replication the previous 2 dna that have old and new along with 2 dna that complete have two new strands together

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5
Q

what is a conservative model ?

A

same 1 double dna strand
1. 2 dna one with a dna with both original stands and the second dna with both completely new dna strands
2. after replication 4 dna ( 3 all new) (1 is the original )

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6
Q

what is the dispersive model

A

same 1 double dna strand
1. 2 dna stands that are MIXED with both old and new
2. after replication 4 more dna stand that both strands are mixed with old and new

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7
Q

what did meselson and stahl do in 1958

A

meselson and stahl first grew ecoli in heavy nitrogen (15n) and transferred it to (14n) medium nitrogen and put it in a cetrifuge tube and the cetrifuge seperated it with the concetration of cscl, heavy dna at bottom
medium dna in middle
light dna at top

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8
Q

what did meselson and stahl prove ?

A

dna replication is semi conservative

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9
Q

why are 5 reasons mutation in dna important

A

1.to alterate protein or rna
2. evolution
3.form new allees
4. no product (protein or rna)
5.altered regulation of a product

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10
Q

what are the 4 things a nucleic acid structure is comprised of
?

A

1.nitrogenous base
2. ribose sugar
3. phosphate group
4.nucleoside(tides)

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11
Q

what are the 5 nitrogenous bases ? and which is one is for rna only and dna only

A

adenine
guannine
cytosine
thymine (DNA)
uracil (rna)

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12
Q

what is the difference of the ribose sugars between dna and rna ?

A

dna has one alcohol groupd
rna has 2 alcohol groups

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13
Q

what is a polynucleotide chain and how does it link ?

A

is multiple nucleitide and is linked via a phospherdiaster bond

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14
Q

how is nucleic acids read

A

5’ end to 3’end

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15
Q

what did watson and crick do

A

figure out the 3d structure of dna

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16
Q

what is chargaff rule ?

A

number of A=T
Number of G=C

17
Q

what is B-dna

A

dna that has a major and minor goove and complete one turn in 10.5 base pairs

18
Q

what are three things major and minor grooves are good for ?

A

1.binding sites for different factors
2. recognizing specific nucleotides sequences on dna
3. has a distrubution of acceptors and donors

19
Q

what are the 5 forces that help form the double helix ?

A

1.phosphate back bone
2. stacking interaction (vanderwalls)
3. hydrophobic interactions
4. ionic interactions
5. hydrogen bonding

20
Q

what are the three forms of dna ? which is the only one that is left handed

A

A
B
Z - left handed

21
Q

what is the rise/base pair along the helix axis for (A) for b-form

22
Q

what is the mean bp/turns for b-form

23
Q

what is the diameter for b-form ?

A

2nm(nano meteres)

24
Q

what are 5 things that denature dna

A

1.heat
2. low ionic strength
3. agents that influence hydrogen bonds
4. agents that enhance solubility of hydrophobic substances
5.high pH

25
how can you monitor dna denature
via absorbance
26
how does an absorbtion spectroo.. work ?
when dna is is double stranded absorption is low , which single stranded it increases
27
what is hypochomic
when dna is still double standed and absortion is low
28
what is hyper chromoic
when dna is single stranded and absorption is high
29
in absorption sepc.. what is temperatue (tm)/ based on ?
the GC content , more gc conetent more temperatuve needed