Lecture 5 - Endomembrane system Flashcards

1
Q

what does molecular chaperone do

A

assists polypeptide folding in ER lumen

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2
Q

molecular chaperon - BiP

A

an ATPase
binds exposed hydrophobic residues
stops proteins from aggregating

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3
Q

molecular chaperone - Calnexin

A

binds N-glycosylated proteins

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4
Q

WHAT CATALYSES DISULPHIDE BOND FORMATION

A

oops didnt mean to shout caps lock sry
protein isomerase

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5
Q

where disulphide bond formation occur and why

A

in ER lumen
cuz is oxidation reaction
and ER lumen is an oxidising environment

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6
Q

what gets added to glycosylate the protein

A

oligosaccharide
derived from a donor caled dolichol

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7
Q

where N-linked glycosylation occur

A

ER lumen

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8
Q

why called ‘N-linked’ glycosylation

A

polysacc transferred onto amino group of the ASPARAGINE (N)

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9
Q

what is glycosylation catalysed by

A

oligosaccharide transferase (OST)
and ONLY when there’s a ‘consensus sequence’

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10
Q

fucntions of N-glycosylation

A

assists protein folding
lysosome sorting signal
cell-cell recognition

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11
Q

what is carbohydrate layer on outside of cell called

A

glycocalyx

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12
Q

name of protein that non-selectively transfers phospholipids between leaflets

A

scramblase
taking the piss with that name

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13
Q

name of protein that selectively transfers phospholipids between leaflets

A

flippase

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14
Q

secretory pathway

A

allows material to move outwards (ER – Golgi – plasma membrane or endosomes/lysosomes)

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15
Q

endocytic pathway

A

allows material to enter the cell (plasma membrane – endosomes – lysosomes)

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16
Q

role of protein coat during vesicle budding

A

deform the membrane into a bud shape
and capture the cargo - basically concentrate it all to one spot

17
Q

name of GTPase that pinches the vesicle off the donor

A

dynamin

18
Q

what 2 things guide the vesicle to right spot to fuse

A

Rab proteins
SNAREs (v and t, complementary)

19
Q

name of process where v-SNARE interacts with t-SNARE

A

docking

20
Q

what does KDEL stand for

A

LysAsoGluLeu
on the C-terminal of soluble proteins

21
Q

cis Golgi network function

A

entry
transport vesicles enter carrying proteins from ER

trans is obvs vice versa

22
Q

name 2 models that explain how proteins move through Golgi

A

vesicular transport
cisternal maturation

23
Q

what part of vesicle budding requires molecular chaperones

A

uncoating

24
Q

msot well studied coat protein

A

clathrin

25
Q

what helps clathrin attach to the membrane

A

adaptins
these also

26
Q

what do o-linked oligosaccharides add on to

A

-OH side chains of serine and threonine