LESSON 2: NUCLEIC ACIDS & PROTEINS Flashcards

(64 cards)

1
Q

transfer of genetic
information from DNA to RNA through transcription, and then
from RNA to protein through translation.

A

THE CENTRAL DOGMA

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2
Q

The genetic material that
carries hereditary information in cells.

A

DNA (Deoxyribonucleic Acid)

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3
Q

The single-stranded nucleic acid
molecule that serves as a messenger carrying genetic
information from DNA to the site of protein synthesis.

A

RNA (Ribonucleic Acid)

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4
Q

The end product of the central dogma,
synthesized through translation. Proteins play crucial roles
in the structure and function of cells, tissues, and
organisms.

A

Protein

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5
Q

NUCLEOSIDE - composition and is held by

A

Nitrogenous base +
Pentose SUGAR

It is held together by:
N-glycoSidic bond

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6
Q

NUCLEOTIDE - composition and is held by

A

NucleoSIDE + PhosphaTe

It is held together by:
EsTer bond

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7
Q

these are your Purines and
Pyrimidines

A

Nitrogenous bases

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8
Q

Your phosphate groups are held together by

A

ANHYDRIDE BONDS

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9
Q

T or F: RNA has its HYDROXYL GROUP (OH)

A

T

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10
Q

T or F: DNA has hydroxyl group

A

F

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11
Q

Building blocks of nucleic acids

A

NUCLEOTIDES

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12
Q

In ____, there was a group of scientists (they still didn’t know
what the structure of DNA looked like). They were trying to
figure out what thing in the body contained the info that we
pass on to the next generations.

A

1920

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13
Q

Erwin Chargaff’s experimental finding:

A

Chargaff’s
rule

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14
Q

T or F: A-T pair has 3 hydrogen bonds (weaker);
T or F: G-C pair has 2 hydrogen bonds (stronger)

A

F and F

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15
Q

Who obtained X-ray crystallography
images of DNA

A

Rosalind Franklin

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16
Q

created the two-strand, double-helix model

A

James Watson and Francis Crick

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17
Q

Striuctures and properties od DNA
Made up of nucleotides held together by ___

A

3’ to 5’ phosphodiester bonds

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18
Q

T or F: 10.5 base pairs per turn (usually)

A

T

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19
Q
  1. ____ - backbones are closer together
  2. ____ - backbones are far from each other
A

1.Minor grooves
2.Major grooves

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20
Q

The bases will cluster inside since
they are hydrophobic in nature

A

Hydrophobic interactions

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21
Q

These forces help maintain the
structural integrity of the DNA
double helix by stabilizing the
close packing of the bases along
the helical axis.

A

van der Waals forces

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22
Q

number of BP per turn of A-DNA*, B-DNA, Z-DNA**

A

11,10,12

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23
Q

morphology of A-DNA*, B-DNA, Z-DNA**

A

Broad &Short, Long & Thin, Long & Thin

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24
Q

screw sense of A-DNA*, B-DNA, Z-DNA**

A

Right handed, Right handed, Left-handed

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25
Features of A-DNA*, B-DNA, Z-DNA**
A-DNA*-In low humidity & high salt conditions B-DNA-Most common form Z-DNA**-In 5’ end of chromosomes
26
LEVELS OF DNA ORGANIZATION Will eventually loop around a histone octamer
1
27
1. Histone + DNA wrapped around it = 2. Made of nucleosomes separated by ___ 3. NA wrapped ___x over a histone octamer (left-handed)
1.NUCLEOSOME 2.LINKER DNA 3.1.75
28
LEVELS OF DNA ORGANIZATION When many nucleosome group together in a 30 nm chromatin fibril it is now called a ___ What level and what's it called?
3 Solenoid
29
LEVELS OF DNA ORGANIZATION Condensation of DNA during PROPHASE of mitosis
5
30
● Condensed, darker on EM ● Sterically inaccessible ● Transcriptionally INACTIVE
HETEROCHROMATIN
31
● Less condensed, lighter in EM ● Sterically accessible ● Transcriptionally ACTIVE
EUCHROMATIN
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- In ____, if you have more methyl groups it mutes your DNA; nagiging inactive - In ____, if you have more acetyl groups it activates your DNA; nagiging active
1.Methylation 2.acetylation
33
Most heterogeneous RNA (5% of total RNA) and template for PROTEIN SYNTHESIS
Messenger RNA (mRNA)
34
Most abundant RNA (80% of total RNA)
Ribosomal RNA (rRNA)
35
Smallest RNA (15% of total RNA)
Transfer RNA (tRNA)
36
● Functions in mRNA processing and rRNA processing ● Splice together the EXONS to form the mature mRNA
Small Nuclear RNA (snRNA)
37
● Acts as an interference ● Interact with the 3’ untranslated region of mRNA to induce mRNA DEGRADATION and TRANSLATIONAL REPRESSION
Micro-RNA (miRNA)
38
Non-coding transcripts of >200 nt ● Involved in regulation of cell differentiation & development, and maintenance of telomere length
Long Non-Coding RNA (lncRNA)
39
● Double-stranded RNA (20-24 bp) ● Induces mRNA degradation
Silencing RNA (siRNA)
40
Sugar moiety of DNA and RNA
Deoxyribose Ribose
41
Purines ofDNA and RNA
Adenine & Guanine in DNA ONLY
42
Pyrimidinesof DNA and RNA
Cytosine &Thymine - DNA Cytosine & Uracil - RNA
43
DNA is more stable because it lacks ____; withstands the ____by alkalis
1.hydroxyl group 2.hydroxylation
44
Most abundant and functionally diverse molecules in living systems
PROTEINS
45
basic side chains
● Lysine ● Arginine ● Histidine
46
acidic side chains
● Glutamate ● Aspartate
47
uncharged polar side chians
● Asparagine ● Glutamine ● Serine ● Threonine ● Tyrosine
48
Between 100-1000 AAs in length ○ Longest protein is ____(25,000 AA)
TITIN
49
➔ Regulate metabolism ➔ Facilitate muscle contraction ➔ Provide structural framework
PROTEIN FUNCTIONS
50
PRIMARY STRUCTURE - Determined by the AA sequence - Has an _____and a _____ terminus
Has an N (NH3) and a C (COOH) terminus
51
SECONDARY STRUCTURE ● Stabilized by _____ ● _____ - supersecondary structures produced by packing of side chains from adjacent secondary structural elements
HYDROGEN BONDS MOTIFS
52
what is the ost common secondary structure? _____ AAs per turn?
ALPHA HELIX ~3.6
53
● AA residues form zigzags or a pleated pattern ● R groups of adjacent residues project in OPPOSITE directions
BETA SHEET
54
Most proteins fold to a __ ?
single stable conformation
55
2 or more polypeptide chains forming one macromolecule
QUATERNARY STRUCTURE
56
Due to a point mutation (missense) in both genes coding for the β-chain
CLINICAL CORRELATE: SICKLE CELL DISEASE
57
Low affinity for oxygen; Abundant HbS than HbA
Anemia
58
Less to no oxygen delivered in the tissues
Tissue anoxia
59
treatment on SICKLE CELL DISEASE ○ Reduce oxidative stress ○ Reduce the damage
L-glutamine
60
treatment on SICKLE CELL DISEASE Counteracts the low affinity of your HbS to O2 by increasing the production of HbF (Fetal Hemoglobin) which has higher affinity to oxygen
Hydroxyurea
61
Because of those occluded vessels
Painful crises
62
Treatment for the pain
Analgesics
63
Monoclonal bodies Inhibits p-selectin
Crizalizumab
64
Changes affinity of Hbs to O2 to increase its affinity
Voxcelator