linda - genetic mutations and DNA repair mechanisms Flashcards

(30 cards)

1
Q

DNA Damage & Mutation Basics

Why is DNA damage more consequential than RNA or protein damage?

A

DNA is the permanent copy of the genome; damage affects future cell generations.

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2
Q

DNA Damage & Mutation Basics

What are the two sources of DNA damage?

A

Spontaneous and induced.

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3
Q

DNA Damage & Mutation Basics

Name the two major forms of spontaneous DNA damage.

A

Deamination and depurination.

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4
Q

DNA Damage & Mutation Basics

What is deamination?

A

Removal of an amine group from adenine, cytosine, or guanine.

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5
Q

DNA Damage & Mutation Basics

What is depurination?

A

Loss of purine bases, resulting in apurinic (AP) sites.

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6
Q

Induced Mutations - Chemical Mutagens

What are base analogs?

A

Chemicals that mimic normal bases and get incorporated into DNA.

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7
Q

Induced Mutations - Chemical Mutagens

Give an example of a base analog.

A

5-bromouracil (5-BU) can replace thymine.

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8
Q

Induced Mutations - Chemical Mutagens

What does 2-aminopurine (2-AP) do?

A

It gets incorporated as adenine instead of thymine.

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9
Q

Induced Mutations - Chemical Mutagens

What do base modifiers do?

A

Chemically alter DNA bases (e.g., nitrous oxide deaminates adenine).

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10
Q

Induced Mutations - Chemical Mutagens

How do intercalators like ethidium bromide affect DNA?

A

They insert between base pairs, causing insertions or deletions.

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11
Q

Induced Mutations - Physical Mutagens

What damage does UV light cause to DNA?

A

Forms pyrimidine dimers that distort the double helix.

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12
Q

Induced Mutations - Physical Mutagens

What is the effect of ionizing radiation on DNA?

A

Causes single or double-strand breaks.

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13
Q

Types of Mutations

What are microlesions and macrolesions?

A

Microlesions affect single nucleotides; macrolesions affect multiple.

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14
Q

Types of Mutations

What are three types of point mutations?

A

Missense, nonsense, and silent mutations.

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15
Q

Types of Mutations

What is a frameshift mutation?

A

Insertion or deletion that shifts the reading frame.

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16
Q

Mutation Effects & Reversion

What are two basic mutation effects?

A

Loss of function and gain of function.

17
Q

Mutation Effects & Reversion

What is a polar mutation?

A

A mutation in one gene that affects downstream genes (common in bacteria).

18
Q

Mutation Effects & Reversion

Can point mutations be reversed?

A

Yes, they are reversible.

19
Q

Mutation Effects & Reversion

What is a true revertant?

A

A mutation that restores the original DNA sequence.

20
Q

Mutation Effects & Reversion

What is a pseudorevertant?

A

A second mutation restores phenotype without fixing original mutation.

21
Q

Suppressor Mutations

What is an intragenic suppressor mutation?

A

Suppressor occurs in the same gene as the primary mutation.

22
Q

Suppressor Mutations

What is an intergenic suppressor mutation?

A

Suppressor occurs in a different gene.

23
Q

Why Mutations Matter

Why are mutations important for evolution?

A

They introduce genetic diversity; some aid adaptation.

24
Q

Why Mutations Matter

What is an auxotroph?

A

A mutant that cannot synthesize a compound required for growth.

25
# Why Mutations Matter What is a prototroph?
A strain that can synthesize all necessary compounds for growth.
26
# The Ames Test What does the Ames test detect?
If a chemical can cause DNA mutations.
27
# The Ames Test What indicates a positive Ames test result?
More revertant colonies on the test plate than the control.
28
# Conditional Lethal Mutants What is a conditional lethal mutant?
A mutant viable under certain conditions but lethal under others.
29
# Conditional Lethal Mutants How can you identify essential genes using temperature-sensitive mutants?
Use replica plating to compare growth at permissive and non-permissive temperatures.
30
# DNA Repair Mechanisms Name the main types of DNA repair mechanisms.
Direct reversal, base excision repair (BER), nucleotide excision repair (NER), mismatch repair (MMR), NHEJ, homologous recombination, SOS response.