M2 chapter 4: enzymes Flashcards

(39 cards)

1
Q

what is an enzyme?

A

protein that speeds up the rate of a chemical reaction. biological catalysts

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

what is a biological catalyst?

A

found in living organisms

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

what is a catalyst?

A

a substance which speeds up a chemical reaction without being used up in the reaction itself

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

what are intracellular enzymes?

A

enzymes that works inside a cell eg catalyse

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

what are extracellular enzymes?

A

enzymes that work outside a cell eg amylase and trypsin

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

what is the structure of enzymes?

A

globular proteins
have an active site which substrate binds to.
active site shape determined by proteins tertiary structure

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

what is a enzyme substrate complex?

A

a temporary molecule formed when the substrate with a specific complementary shape binds to the enzyme

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

how do enzymes speed up reactions?

A

they lower the activation energy needed for a reaction so they can happen at lower temperatures speeding up the rate of reaction

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

how does the enzymes lower the activation energy?

A

-if substrate molecule needs to break down the active site puts strain on the bonds between molecules so it can break more easily
-if substrate molecules need to bond together the active site pulls them closer together reducing repulsion making it easier to bond

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

what is the lock and key model?

A

The active site of an enzyme is structured to fit a specifically shaped substrate. Once the substrate binds to the active site, the enzyme will facilitate the reaction and release products of the reaction.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

what is the induced fit model?

A

a substrate binds to an active site and both change shape slightly, creating an ideal fit for catalysis.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

what factors affect enzyme activity?

A

temperature
pH
substrate concentration
enzyme concentration

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

how does temperature effect enzyme activity?

A

increase rate of reaction as more heat means more kinetic energy so the molecules move faster. this means the enzyme and substrates are more likely to collide and form an enzyme substrate complex

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

what is the optimum temperature for enzymes?

A

37 degrees Celsius

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

what else in the reaction does the temperature also increase?

A

energy of collisions meaning each collision is more likely to be a successful collision

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

what happens if the temperature gets too high?

A

reaction will stop because the enzyme molecules will vibrate too much which causes bonds which holds the enzymes shape to break

17
Q

what is a Q10 value?

A

shows how rate of reaction changes when temperature in creases by 10 degrees

18
Q

what effect does pH have on rate of reaction?

A

enzymes operate the fastest at an optimum pH usually pH 7.

19
Q

what happens to enzyme activity when the pH goes above and below the optimum pH?

A

Above and below the optimum pH the H+ and the OH- ions break the hydrogen bonds which hold the enzymes tertiary structure in place. denaturing the enzyme

20
Q

what effect does enzyme concentration have on enzyme activity?

A

more enzymes in a solution increases the rate of reaction because their is more enzymes for the substrate to collide with.

21
Q

what is a saturation point?

A

when all the active sites are full so a higher concentration of enzymes or substrates wouldn’t make a difference

22
Q

what effect does substrate concentration have on enzyme activity?

A

more substrate in a solution increases the rate of reaction because their is more substrate to collide with the active site

23
Q

what is a cofactor?

A

a non protein substrate bound to an enzyme

24
Q

what is a inorganic cofactor?

A

works by helping the enzyme and substrate bind together . it isn’t used up or changed in anyway

25
what is a organic cofactor?
Aka a coenzyme participates in the reaction so is changed by it move chemical groups between enzymes as carriers
26
what is a prosthetic group?
a cofactor which is tightly bound to the enzyme. eg: zinc ions are a prosthetic group for carbonic anhydrase
27
what are enzyme inhibitors?
bind to enzyme to stop them from working 2 types- competitive and non competitive
28
what do competitive inhibitors do?
compete with substrate to bind to active site as it is the similar shape to block it if high conc of inhibitor little substrate will bind to enzyme
29
what would a higher concentration of substrate effect a competitive inhibitor in a reaction?
faster rate of reaction to a certain point as more substrate can compete with the inhibitors to bind to the active site
30
what do non competitive inhibitors do?
bind to enzymes away from active site at allosteric site. cause active site to change shape so substrate can't bind to it
31
what effect does a higher concentration of substrate have on a non competitive inhibitor?
no difference as the substrate can't bind to the active site
32
what makes a inhibitor irreversible?
strong covalent bonds
33
what makes a inhibitor reversible?
weak hydrogen and ionic bonds
34
what sort of drugs are inhibitors?
antiviral drugs such as reverse transcriptase antibiotics such as penicillin
35
what are metabolic poisons?
interfere with metabolic reactions in cells and can cause damage and death
36
what are some examples of metabolic poisons?
cyanide malonate arsenic
37
what is product inhibition?
when a product inhibits the enzyme that has catalysed its formation.
38
what is end product inhibition?
final product in metabolic pathway inhibits an enzyme that acts earlier on in pathway. this regulates the pathway and controls the amount of end product made
39
Are product and end production inhibition reversible?
yes as levels of product decrease so do the levels of inhibition therefore enzyme can function again and more product can be made.