Mechanisms Of Evolution Flashcards

(96 cards)

1
Q

mechanisms for evolution

A
  1. mutations
  2. natural selection
  3. genetic drift
  4. gene flow (migration)
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2
Q

mechanism for evolution - mutation

A
  • a permanent change in the DNA sequence of a gene
  • changes the frequency of alleles in a population - introduces new alleles not present before
  • creating variation in DNA sequences that result in different phenotypes
  • new alleles can be beneficial, harmful or neutral
  • harmful (deleterious) mutations will reduce in frequency (e.g. Cystic fibrosis)
  • beneficial mutations will spread and become more common (e.g. dark peppered moth, antibiotic resistance in bacteria, longer necks in Galapagos tortoises)
  • leading to evolution
  • a mutation causes a new allele in the gene pool
  • the frequency that each occurs changes depending on “fitness”
  • this is the organisms ability to survive and reproduce
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3
Q

theory of evolution

A
  • explanation for the huge diversity of life on Earth
  • underpinned by comprehensive evidence
  • initially put forward in 1858 by:
    – Charles Darwin
    – Alfred Russel Wallace
  • allowed him to observe differences and similarities between geographically separated animals
  • theory based on 3 observations made by Darwin
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4
Q

Charles Darwin

A
  • keen amateur naturalist
  • joined a surveying expedition as a biologist
  • voyaged on HMS Beagles
    – Galapagos Islands
    – New Zealand
    – Australia
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5
Q

Darwins 3 observartions

A
  • variation: members of a species vary and variations are passed on from one generation to the next
  • birth rate: living organisms reproduce at a rate greater than their food supply and must compete for resources
  • natures balance: although birth rate is high, most species numbers remain at a constant level
    based on the observations, Darwin interpreted and inferred:
  • excessive birth rate and limited resources -> struggle for existence
  • variations mean the organisms best suited to their environment are more likely to survive -> become known as “survival of the fittest”
    – more organisms with favourable characteristics survive
    – organisms with less favourable characteristics die before they can reproduce
    – survival of fittest possible because of variation
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6
Q

mechanism for evolution - natural selection

A

occurs when
– selection pressures in the environment
– give an advantage to a specific phenotype
– increases its survival and reproduction
- “survival of the fittest” - when individuals in a population possess certain traits/alleles that allow them to survive selective pressure, reproduce and pass on the favourable alleles
- an inherited trait that allows an individual to survive and reproduce is called an adaptation
- natural selection only acts on inheritable traits - selecting for beneficial alleles and increasing their frequency, and selecting against deleterious alleles and decreasing their frequency - adaptative radiation

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7
Q

selection pressures

A
  • competition
    – between species
    – within species
  • predator-prey relationships
  • sexual selection
  • environmental factors - human impacts, climate change, pollution
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8
Q

sexual selection

A
  • selection by male/female individuals that assist in winning of a male or in copulation
  • type of natural selection linked to mating behaviour of animals
  • leads to dimorphisms (separate male/female)
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9
Q

phenotypic selection

A
  • selection of allele frequency in a gene pool can be positive or negative
  • as phenotype is largely determined by genotype, the genotype helps determine the reproductive success (fitness) of an organism
  • characteristics may be selected for (positive) or against (negative) depending on the environmental conditions. This will in turn affect the frequency of the alleles in the gene pool
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10
Q

principles of natural selection

A
  1. variation
  2. overproduction
  3. competition and survival of the fittest
  4. reproductive rate is higher
  5. heritability
  6. change in allele frequency
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11
Q

variation

A
  • individuals in a population show variation/they differ from one another
  • variation is due to mutations in alleles, meiosis (crossing over, independent assortment and random segregation) and random fertilisation
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12
Q

overproduction

A
  • there are more individuals produced in a population than the environment can support
  • environmental resources such as food, water, shelter, reproductive partners are limited
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13
Q

competition and survival of the fittest

A
  • environmental factors such as food availability, predators, disease favour those with advantageous traits/alleles
  • those individuals with the advantageous trait/allele will outcompete those without the trait/allele
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14
Q

higher reproductive rate

A
  • those individuals with the advantageous allele are more likely to survive, reproduce and therefore have a higher reproductive rate
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15
Q

heritability

A
  • characteristics that assist survival/advantageous alleles are more likely to be passed down and inherited by the offspring
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16
Q

allele frequencies change over generations

A
  • over consecutive generations, the frequency of the advantageous allele increases and the disadvantages decreases
  • over many generations the advantageous allele can become fixed - 100% and the disadvantageous allele extinct - 0%
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17
Q

peppered moths

A
  • 2 forms exist - dark and light
  • dark forms easily caught by predators (birds) if they live on light coloured trees, light forms are more likely eaten if surroundings are dark
  • in unpolluted areas, trees are pale and the dark forms decrease
  • in polluted areas, trees are darkened will pollution and the pale forms decrease
  • in this case the selection pressure (predation) is affected by the colour of their surroundings
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18
Q

antibiotic resistance in bacteria

A
  • variation exists in the population - so some are more resistant to antibiotics than others
  • when there are treated, the resistant forms are more likely to survive
  • these will breed and pass on their resistant alleles to their offspring
  • after several generations, the population will consist of mainly resistant bacteria
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19
Q

natural selection is:

A
  • selective: it selects for a particular allele based on an organism’s phenotype
  • directional - the allele frequencies change in the direction of the advantageous allele (it increases)
  • adaptive - it drives adaptation based on an environmental pressure
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20
Q

the mechanism of adaptive evolution

A
  • natural selection is driving force for adaptive evolution
  • natural selection is the only mechanism that can lead to adaptive evolution (new species that are better suited to their environment (adaptation))
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21
Q

artificial selection

A
  • also called selective breeding
  • the international breeding or reproduction by humans of individuals with desirable traits, resulting in changes of allele frequencies in gene pool over time
  • human intervention decides what traits are selected for, usually traits beneficial to humans
  • applied to agricultural species, pets
  • over many generations, the practise leads to the development of strains with the desired characteristics
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22
Q

steps in selective breeding

A
  1. choose parent organisms that show desired traits and breed them
  2. choose the best offspring form these parents to breed the next generation
  3. repeat the process across many generations. Over time, the desired traits will become more common
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23
Q

examples of selective breeding

A
  • intentionally mating 2 dogs in order to achieve or eliminate a specific trait
  • a farmer saves seed from a hearty crop to replant the next year
  • dogs are bred for competition or for hunting
  • cows can be bred to increase muscle mass or milk production
  • cabbage and cauliflower were developed from the wild mustard plant
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24
Q

pros of selective breeding

A
  • farmers can produce crops with higher yield
  • farmers can produce animals that grow more meat, more milk, more eggs, faster and stronger
  • can produce friendlier and prettier pets
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cons of selective breeding
loss of genes in a population - by not allowing some animals to breed, their genes could be lost forever in a population animal discomfort - may cause physical problems such as animals bred for rapid weight gain may develop muscular/skeletal problems - farmers breed cows to have large udders, so now since cows have difficulty walking and have health problems - some chickens are too heavy to stand, so they have to lay down all the time can lead to interbreeding - in order to create a certain type of animal through selective breeding, sometimes brothers and sisters of a population will mate to pass on favourable traits, and this can lead to health problems
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gene pools
- natural selection acts on alleles, which are inheritable - the total collection of alleles that exists within a population is called its gene pool
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population
is a group of individuals of the same species, which live in the same geographic area and readily interbreed to produce fertile offspring
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allele frequencies - how do they change in populations?
- unless there is an evolutionary process acting on a population, the allele frequency in the population's gene pool should remain the same from generation to generation - although the proportions of phenotypes in the population may change, the proportions of alleles in the gene pool should not - but real populations do not change over time and microevolutionary change does happen These processes that lead to change in a population - mutations of an allele, introducing a new allele to the gene pool - gene flow - immigration into the population and emigration out of the population - genetic drift - natural selection
29
variation created through mutations
- mutations of an existing allele can produce a new allele - alleles introduced this way are often recessive and stay hidden, unless individuals breed with related individuals - recessive alleles are often deleterious, but are also an important source of biological variation - mutation create variation within the gene pool or genetic diversity. Genetic diversity is what allows evolution to occur - this is because genetically diverse populations have a greater range of phenotypes which increases the chance that at least some individuals will survive in the face of environmental change
30
gene flow
- migration is the movement of individuals between populations - when individuals move from one population to another and then breed with the residents of the new population, 'Gene flow' can change frequency of alleles in the new population - immigration - movement of individuals INTO a population - emigration - movement of individuals OUT OF a population migration does NOT create new genetic variation, it moves around already existing variation
31
allele frequency
- allele frequency is simply how common an allele is in a population - consider a gene that has 2 alleles: A and a, the frequency can be worked out using the following: the frequency of allele A = number of A alleles in the population / total number of alleles in the population
32
(random) genetic drift
- genetic drift occurs because alleles are inherited randomly from parents - it describes changes to the gene pool that occurs by chance and are not driven by selection pressures. These changes can occur: - because allele frequencies are not the same from generation to generation. for example, an allele may not be passes on to the next generation and, in small populations, this may mean that it is soon lost from the gene pool entirely - because a change event may kill individuals non-selectively, altering the allele frequencies in the gene pool - the effect of genetic drift are much easier to see in small populations - whereas the effects of genetic drift on large populations are minor compared to the entire gene pool and are often overshadowed by natural selection, genetic drift working in small populations can result in big changes
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there are two kinds of genetic drift
- founder effect - bottleneck effect
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the founder effect
- this occurs when a small number of individuals found a new population (they colonise a new isolated area such as an island) - the alleles present in the founding members of the new population may not be representative of the original population - due to the small population there is a greater chance for genetic drift to occur and there to be a lower range and frequency of alleles - as a result evolution is likely to occur faster in founder populations when compared to the original population
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the bottleneck effeect
- it occurs when a population is drastically reduced in size, for example by a natural disaster. The alleles present in the surviving members of the population may not be representative of the original population. The range of alleles will be reduced and the frequency of the alleles will change. If the population increases again, it will have a reduced genetic biodiversity - this makes the surviving population more at risk of extinction
36
speciation
natural selection produces changes in the allele frequencies of gene pools when the changes become so great the populations are so different that they can no longer reproduce with one another - speciation has occured - natural selection causes microevolution within a gene pool - eventually a population accumulates enough changes that a new species can be identified and speciation has occurred - sometimes several speciation events occur and lead to a collection of new species or even higher classification groups. this is macroevolution - microevolutionary changes build up over time to produce macroevolution this occurs when populations are reproductively isolated. Because of this they are subjected to different selection pressures - these differing selection pressures mean that the population changes significantly from the original population to form a new species
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steps in speciation
1. variation - original population - one population, one species - within a population a range of variety of characteristics exist. this population shares a common gene pool 2. isolation - initial step of speciation - two populations, one species - a barrier has formes which prevents interbreeding between the two populations. the two populations now have separate gene pools 3. selection - evolution of reproductive isolation - two subspecies, one species - in each population, over a number of generations, different selection pressures will act to bring about a change in the gene frequencies of each gene pool. such a changing population is evolving into separate subspecies 4. speciation - new distinct species after equilibrium of new ranges - two species - if isolation and selection continue over a long period of time, the changes in the gene frequencies can become great enough to prevent population from ever interbreeding successfully. When this happens the populations have evolved into separate species the key in speciation is there must be isolation - gene flow must be inhibited between the two groups so natural selection can happen independently of each other
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isolated mechanisms
- isolating mechanisms separate two subgroups of a population and prevent them from producing fertile, viable offspring - these mechanisms can operate before reproduction has occurred or after reproduction - the organisms become so genetically diverse that they form two new species - they are then no longer able to interbreed, even if the populations come back together
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pre-reproductive/prezygotic isolating mechanisms
pre-reproductive isolating mechanisms are biological or ecological mechanisms that prevent organisms from being able to interact to reproduce: - geological from physical barriers: such as rivers, mountain ranges, oceans - temporal (time) mechanisms: individuals breed during different seasons of the year of times of the day - behavioural mechanisms: individuals have different seasons of the year of times of the day - morphological mechanisms: individuals have different reproductive structures
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post-reproductive isolating mechanisms
three mechanisms don't prevent mating but prevent formation of viable, fertile offspring - gametes mortality (gametes do not survive after mating) - zygote mortality (zygote forms but does not survive) - hybrid sterility (adult offspring develop but cannot produce viable gametes) - hybrid sterility is not often a reproductive isolating mechanism in plants, where polyploidy is common
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allopatric speciation
in allopatric speciation from the ancient Greek 'allos' = other and 'patro' = homeland, gene flow is disrupted when populations become physically separated through geographical isolation. The populations diverge. This may be become of different selection pressures acting on the two populations, or it may be due to other random processes such as genetic drift - allopatric speciation occurs as populations are geographically isolated
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allopatric speciation - physical barriers that can separate a subpopulation from its original population:
- water, for terrestrial organisms - land, for aquatic organisms - mountains
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allopatric speciation - new physical barriers can arise due, among other things, to:
- continental drift - rising sea levels - climate change
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steps in allopatric speciation
- subpopulations - isolated by physical barrier - no gene flow - different selection pressures - natural selection - two different species - genetic drift will occur independently in subpopulations
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case study: squirrels and the grand canyon
- before the grand canyon was carved out by the Colorado river, only one species of squirrel inhabited the area - as the canyon got deeper over time, it became increasingly difficult for squirrels to travel between the north and south sides - eventually it was too deep for the squirrels to cross, they became isolated on each side resulting in two sub-populations that were reproductively isolated from each other - eventually these populations became two species
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extinction
selection pressures can become so great that species become extinct
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causes of extinction
genetics and demographics - small populations = increased risk - mutations -- causes a flux in natural selection -- beneficial genetic traits are overruled - loss of genetic diversity -- shallow gene pools promote massive inbreeding - habitat destruction - natural causes (asteroids, acid rain, disease)
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mass extinction
extinction occurs quite rarely but there have been periods when the rate of extinction has been quite high. These are mass extinction we appear to be in the midst of the sixth mass extinction, which began around 50,000 years ago, when modern humans spread out of Africa this coincided with the extinction of several species of megafauna
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Australia bushfires and species extinction
more than 1 billion animals were killed in the 2019/2020 Australia bushfire season. Endangered species, including the long-footed potoroo, Kangaroo Islands gloss black cockatoo and Batman Bay's Spring midge orchid were pushed towards extinction the devastating wildfires undid decades of careful conservation work on Kangaroo Island and have threatened to wipe out some of the islands unique fauna altogether - preservation of genetic diversity is key to preventing extinction - having a large gene pool means having more alleles to draw upon to face the pressures of natural selection
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preventing extinction
- biogeography - involves maintaining population distributions and allowing populations to remain connected -- conservation areas -- wildlife corridors - reproductive behaviour - that maintains diversity and random mating practices - population dynamics - maintaining population size and density
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preventing extinction by preserving genetic diversity
populations with reduced diversity face increased risk of extinction, so conservation projects usually focus on maintaining genetic diversity rapid extinction events can lead to greater loss of large organisms than of small ones. A large distribution area is generally a big advantage, because it may allow some pockets of habitat to survive large population size can also be some protection, because the population is likely to have a more diverse gene pool and thus a greater variety of alleles and phenotype options as the pressures from natural selection change
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applications of biotechnology
- human/medicinal - agriculture - conservation - forensics
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applications for human/medicinal
- genetic testing (e.g. BRCA1 and BRCA2 genes) - pharmaceutical production via cloning (e.g. growth hormone, insulin) - gene therapy - correcting "defective" gene with healthy version (e.g. Cystic fibrosis, CRISPR) - cell therapy - using whole cells - paternity testing, ancestry
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application for agriculture
- improving nutrition in food - pesticide resistance - herbicide resistance - disease resistance - drought tolerance - other GMOs
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genetic engineering
- genetic engineering involves changing the genetic sequences of an organism using modern biotechnological techniques, like recombinant DNA technology - genetically engineered organisms are also called genetically modified organisms (GMOs) or transgenic organisms - a genetically modified organisms has had its genome changed at the molecular level in a laboratory to express certain traits that are desirable. These organisms then grow and pass the trait onto their offspring - a transgenic organism is a genetically modified organism that has has a gene from a completely different species added to their genome.
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requirements for modification of DNA:
- you must be able to make enough copies of DNA to work with -- or else there are not enough to work with, and you'll run out - you must be able to extract and purify DNA -- or else parts of cells will interfere with the process - you must be able to cut DNA exactly where you want -- or else you can't have specific engineering of DNA sequences - you must be able to insert a piece of DNA exactly where you want into another piece of DNA (this is called recombination) -- or else the inserted DNA or the receiving DNA may not work properly - you must be able to identify successful recombinant events -- or else you may waste a lot of effort and money - you must be able to read the sequence of DNA -- so that you can check the right modifications have been made
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recombinant DNA
recombinant DNA is simply DNA made from two or more different sources, who may be of the same or different species. You could think of it a bit like an organ transplant, but with genes
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how do we make recombinant DNA?
- isolate the gene of interest and cut it out using enzymes - make a cut in an isolated bacterial plasmid, a DNA molecule that will transport the gene - use enzymes to bond the gene and the plasmid together - insert the plasmid into a bacterial colony, which will express the gene and produce the product of interest
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tools needed for recombinant DNA
we always use the same sticky-end restriction enzyme to cut the gene of interest and the bacterial plasmid this ensures that the two cut ends have the same overhanging segments, which will be complementary. They can easily join together using base pairing rules. Not all plasmids take up the restriction fragments, simply due to chance. The plasmids that do not take up the restriction fragments form weak hydrogen bonds across the strands, but these aren't strong and stable enough. There are still gaps in the backbone of each DNA strand To properly join the two DNA strands together, we use the "glue" ligase, where restriction enzymes break phosphodiester bonds, ligases create phosphodiester bonds between bases. this creates a more stable joint. The reason this works because the structure of DNA is consistent across all organisms. Restriction enzymes and ligases work consistently across DNA molecules
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copying DNA using plasmids
plasmids make good DNA copiers because: - plasmids can incorporate foreign DNA - plasmids have a variety of recognition sites, so scientists can mix and match restriction enzymes to produce the most suitable cut - plasmids DNA sequence are separate from the main body of the bacteria's DNA - their small, circular nature gives them stability and they are easy to manipulate - plasmids can be copied within bacteria, which are easily grown in the lab - plasmids can replicate even when they contain foreign DNA - genes on plasmids can be expressed in bacteria
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recombinant plasmids
for recombinant plasmids to be useful, they need to enter a host cell so that the gene can be expressed. Scientists can simply add the recombinant plasmid to a bacterial colony, as bacteria are capable of undergoing bacterial transformation, where they simple absorb genetic material from their environment. Some bacteria take up the recombinant plasmid, while others don't. Inside the ones that do, the recombinant plasmid replicated, to that the host cell contains multiple copies of the plasmid. when the host undergoes cell division, the plasmids do too. these two methods amplify one another, so we see many plasmids and many copied of the gene of interest. the host expresses the gene and produces large quantities of the desired product.
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how do we identify and isolate the colonies that have taken up the recombinant plasmid?
scientists go back to the drawing board and make sure that the plasmid - before doing any kind of cutting and pasting - contains a marker gene for identification and a marker gene for isolation. For identification, scientists use screening genes such as lacZ. When expresses, this gene produces an enzyme that in turn produces a blue substrate. some restriction enzymes cut in the middle of this gene, so recombinant colonies cannot produce this enzyme. They remain white, instead of turning blue. Other screening genes produce florescent proteins, which light up in florescent microscopy. For isolation, scientists use antibiotic resistance genes, such as amp. Although typically undesirable, antibiotic resistance keeps the recombinant colony alive while others die off. scientists simply apply an antibiotic (for amp, this is ampicillin) to isolate the recombinant colonies
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using plasmids
1. a gene of interest (DNA fragment) is isolated from human tissue cells 2. an appropriate plasmid vector is isolated from a bacterial cell 3. human DNA and plasmid are treated with the same restriction enzyme to produce identical sticky ends 4. restriction enzymes cuts the plasmid DNA at its single recognition sequence, disrupting the tetracycline resistance gene 5. mix the DNAs together and add the enzyme DNA ligase to bond the sticky ends 6. recombinant plasmid is introduced into a bacterial cell by simply adding the DNA to a bacterial culture where some bacteria take up the plasmid from solution
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plasmid vectors - as an example of transformation
plasmids are accessory chromosomes occurring naturally in bacteria - in nature, plasmids are usually transferred between closely related microbes by cell-to-cell contact (a process called conjugation) - simple chemical treatments can make mammalian cells, yeast cells and some bacterial cells that do not naturally transfer DNA, able to take up external DNA - the bacterium Agrobacterium tumefaciens (opposite) can insert part of its plasmid directly into plant cells
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the Tu plasmid
the Ti plasmid is form a soil bacteria that causes tumors (galls) in plants - it can be successfully transferred to plant cells where a segment of its DNA can be integrated into the plant's chromosome
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case study 1: wheat crops
- important stable in human and livestock diets - worlds most widely cultivated crop - significant threat of disease by Leaf rust and yellow rust - able to isolate the rust-resistance gene L6 from a rust-resistance falx plant - introduce it into a wheat plant - also other elements such as increasing yield, tolerance to abiotic stress etc
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case study 2: golden rice
- bioengineered transgenic rice crop - first produced in 1999 - contains B-carotene (provitamin A) from daffodils and bacteria (genes inserted rice embryos using a plasmid) - converted int vitamin A in consumers - tackling childhood blindness in 3rd world countries, also skin and immune health - GR2 contains 25x more B-carotene
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case study 3: roundup ready canola
- feeds livestock, pets, fertiliser, produces oil - herbicides used to kill weeds growing throughout the crop - develop canola crops that are resistant to herbicide - these contain a protein to break down glyphosate from a soil bacteria - can spray broad-spectrum herbicide and crop will be unaffected
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case study 4: Bt cotton - pest resistance
- Bt cotton contains genes from the soil bacterium, which are toxic to the common cotton pathogen, the Heliothis caterpillar
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case study 5: AquAdvantage salmon
- 2015 - 1st approved transgenic animal consumption, first harvests in 2020 - genes from: -- Pacific Chinook Salmon - growth hormone -- Ocean pout - promoter sequence - capable of growing at twice the rate of conventional Atlantic salmon without affecting any other qualities - growth time hales from 3 years to 18 months - eggs sterile, so unable to breed if escaped
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arguments for GMO food
- can improve health, nutritional value, growth capacity of agricultural species, help contribute to global food crisis and public health - strict guidelines ensure food is safe, DNA is common to all organisms
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arguments against GMO food
- selective breeding has/can be used to improve agricultural species - long term effects of GMOs unknown
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adverse effects of transgenic organisms - loss of genetic diversity
- transgenic crop is a single line or strain (monoculture) - only the transgenic crop may be farmed or unmodified crop may not be farmed - may limit ability to crop to adapt to other aspects of the environment/pests - could reduce potential to develop desirable crop lines in the future
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adverse effects of transgenic organisms - can become a pest
- the factors limiting growth of transgenic plant are removed - therefore transgenic plant becomes a weed of difficult to control - transgenic plant may monopolise other resources - they outcompete other plants or change food web
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adverse effects of transgenic organisms - the gene may be transferred to other species
- transgenic species may exchange genes to other species - resulting in the engineered trait in another species - these species may become a superweed/pest because they can no longer be controlled
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adverse effects of transgenic organisms - herbicide-resistant transgenics may lead to overuse of herbicides
- if the plant was engineered for herbicide resistance, farmers may overuse herbicides (to kill weeds) - the overuse will pollute the environment or cause evolution of resistant weeds by natural selection
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super weeds
- herbicide resistant weeds often called "super weeds" are nuisance plants that have developed resistance to one of more herbicides - weed resistance to herbicides can develop in GMO and non-GMO crops - gene transfer or gene flow can occur between GMO crops and organic or other related plants crops via cross pollination. E.g. Canola crop in Kojonup - resulting in the transgenic trait being transferred - these plants may now become "super weeds" because they are no longer controlled by the herbicide
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arguments for biotechnology
- genetic engineering has existed for year e.g. farmers breed specific cattle to achieve desired traits - biotechnology is simply an extension of this
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arguments against biotechnology
- not natural - selective breeding only involves individuals from the same species, biotechnology can mean transferring genes across species - rarely happens naturally
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positive effects of biotechnology on the environment
- crops can be made resistant to low impact herbicides, enable farmers to use less toxic herbicides - little transfer of genes between species
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negative effects of biotechnology on the environment
- herbicide-resistant crops may encourage farmers to use more herbicide, potentially more damaging for environment - may be some gene transfer, weeds become resistant to herbicides
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biotechnology for conservation
- conservation biology - the integrated study of ecology, physiology, evolution, molecular biology and genetics with a view of sustaining biological diversity at all levels - biotechnology can be used for: -- monitoring endangered species -- assessing gene pools for breeding programs -- quarantine - biodiversity levels - genetic, species and ecosystem, all interconnected - biotechnology - used to maintain viable gene pools - gene pool - a collection of alleles for all the genes in the reproducing members of a population at a given time - it is a genetic reservoir of traits - large gene pool = large genetic variation - viable gene pool - contains sufficient alleles/genes to give enough genetic diversity for survival in a changing environment - to maintain a viable gene pool must consider -- biogeography -- reproductive behaviours -- population dynamics
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reproductive behaviour
- behaviours related to the production and care of offspring, courtship, sexual behaviour, parental care - needs to be considered to prevent inbreeding and loss of advantageous genes - keep advantageous alleles, genetic diversity and reproductive fitness high
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population dynamics
- study of the number, gender, age and relatedness of individuals - affected by births, deaths, immigration and emigration - factors affecting dynamics are both density-dependent and density-independent -- availability of resources -- bushfire, logging
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monitoring endangered species
- identifies species threatened with extinction - provides evidence of effective strategies - eDNA (environmental DNA) is DNA left behind in an environment by an organism (hair, scats, skin, scales) -- platypus, northern quolls, gouldian finch
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Gouldian finch
- use of a probe that monitors DNA in water bodies used by the finch - able to use data to estimate population size, population diversity, reproduction
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platypus
- enviroDNA using eDNA to monitor the platypus - platypus difficult to observe in the wild, very elusive, nocturnal, widespread and sparse population - collecting data about the changing distribution, able to list them on endangered list - monitor the threats to populations
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northern quoll
- northern populations have declined significantly due to land clearing, increase in human population, can toads and feral cats - populations are disconnected - now listed an endangered - use scats for analysis - sequencing and profiling, diversity of population - knowing the boundaries of populations, barriers to gene flow can assist in developing effective conservation plans
90
breeding programs
- small populations at risk of loss of genetic diversity, inbreeding depression -- increased risk of deleterious recessive alleles becoming homozygous --> increase in genetic diversity - PCR, DNA sequencing, genome mapping can be used to selectively breed individuals that are not related/show great genetic diversity - managed in zoos by studbooks - create "insurance populations" by translocation - e.g. mountain pygmy possum, Tasmanian devil
91
quarantine
- the isolation of organisms that have arrived from elsewhere or possibly been exposed to disease - Khapra beetle - stored grains (wheat, rice, dried food) -- often confused with another less detrimental pest -- DNA fingerprinting to accurately identify
92
recombinant DNA in environmental conservation
- using genetically microorganisms for bioremediation - bioremediation - consumption and breakdown of environmental pollutants by introduced or naturally occuring micro-organisms - used to remove heavy metals and toxic substances from contaminated sites
93
applications for forensics
- crime scenes - identification of disaster/terrorism victims - tracking illegal animal trade
94
ethics
moral principles concerning right and wrong that govern behaviour
95
bioethics
the study of ethical issues arising from advances in biology and medicine
96
emerging technologies
- cloning - cloning a gene - recombinant DNA - biological cloning - cloning an organism -- embyo splitting - egg fertilised in vitro, two cells of zygote split then develop individually -- nuclear transfer - nucleus from donor inserted into a hollow ovum, divides and then develops