medical genomics Flashcards

(32 cards)

1
Q

What is the primary use of GWAS?

A

to identify genetic variations associated with complex traits or diseases

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2
Q

The 1000 Genomes Project aimed to find genetic variants with a frequency of at least:

A

1%

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3
Q

What is the main goal of the ENCODE Project?

A

To identify functional elements in the human genome

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4
Q

Which of the following is NOT considered a member of the microbiome?

A

A. Symbionts
B. Commensals
C. Parasites
D. Pathobionts
✅ Correct answer: C

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5
Q

Q10: Which sequencing method belongs to the third generation?

A

C. PacBio

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6
Q

What is the main aim of genetic mapping?

A

To discover how often two loci are separated by meiotic recombination

(or to determine the location of genes and genetic markers on chromosomes)

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7
Q

Which of the following is a key feature of linked genes?

A

They are transmitted together more often than not

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8
Q

If two genes are 50 map units apart, what does it suggest?

A

They undergo recombination in 50% of meioses and they are on different chromosomes

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9
Q
  1. What technique is typically used to detect the recombination between genetic markers?
A

Test crosses

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10
Q

In the context of complex diseases, what does “multifactorial” mean?

A

Involving multiple genetic and environmental factors

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11
Q

Which approach is preferred for mapping susceptibility factors when the genetic model is unclear?

A

Non-parametric methods (e.g., affected sib pair analysis)

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12
Q

The “common disease–common variant” hypothesis proposes that:

A

B) Common diseases are due to many common gene variants with modest effects

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13
Q

What does the “mutation–selection” hypothesis suggest about susceptibility factors?

A

They are primarily due to individually rare, recent mutations

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14
Q

In haplotype mapping, how is a “haplotype” best defined?

A

A group of adjacent alleles that are inherited together

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15
Q

What does “linkage disequilibrium” (LD) refer to?

A

C) The non-random association of alleles at two or more loci

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16
Q

Q: What is the main focus of genomics?

A

Answer: B) DNA structure and function

17
Q

Q: Which of the following is NOT a branch of genomics?

A

A) Functional genomics

B) Structural genomics

C) Neurogenomics

D) Epigenomics
Answer: C) Neurogenomics

18
Q

Q: Functional genomics primarily studies:

A

Answer: B) Gene expression and gene products such as mRNA and proteins

19
Q

Q: Transcriptomics is a subfield of:

A

Answer: B) Structural genomics

20
Q

Q: Which subfield of genomics studies evolutionary relationships between genes and proteins of different species?

A

Answer: A) Comparative genomics

21
Q

Q: Which of the following best describes epigenomics?

A

the study of changes in gene expression that occur without altering the underlying DNA sequence

22
Q

Q: Which branch of genomics focuses on detecting variations in DNA methylation and chromatin modifications?

A

Answer: C) Epigenomics

23
Q

Q: The goal of pharmacogenomics includes all EXCEPT:

A

A) Developing personalized drugs based on genetic makeup

B) Improving drug efficacy and safety

C) Eliminating the need for clinical drug trials

D) Understanding genetic causes of variable drug responses
Answer: C)

24
Q

Q: Global hypomethylation in cancer typically leads to:

A

Answer: B) Oncogene activation and chromosomal rearrangement

25
Q: What is the consequence of hypermethylation observed in cancer?
Answer: B) Silencing of tumor suppressor genes
26
Q: Which protein mutation is associated with Rett syndrome and loss of imprinting?
Ansr: B) MeCP2 (methyl CpG binding protein 2)
27
Q: Which method is NOT a common strategy for detecting DNA methylation?
RNA-seq
28
Q: Which histone modification is generally associated with gene silencing?
Answer: B) Methylation of H3K9
29
Q: The ChIP technique is primarily used to study:
Answer: C) Protein-DNA interactions and chromatin state
30
Q: What is the role of antibodies in a ChIP experiment?
Answer: C) To immunoprecipitate specific DNA-binding proteins or histone modifications
31
Q: Methylation variable positions (MVPs) are
Answer: B) Epigenetic markers that vary between tissue types and disease states
32
Q: Genetic profiling can be used for all EXCEPT
A) Predicting behavior traits like aggression or risk-taking B) Forensic identification such as eye or hair color C) Diagnosing infectious diseases caused by bacteria D) Identifying risk for mental or bodily diseases Answer: C