Microbial genetics Flashcards

(69 cards)

1
Q

Extra chromosomal unit of heredity. It carries with it code for toxicity and antibiotic resistance. Replicates on its own

A

Plasmid

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2
Q

What are the 3 components of DNA nucleotides

A

Phosphate group, deoxyribose sugar, adenine-guanine-thymine-cytosine bases

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3
Q

Functions as a structural part of nucleic acid

A

Phosphate

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4
Q

Function is to express genetic information

A

Nitrogen bases

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5
Q

This RNA is the site of protein synthesis

A

rRNA

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6
Q

This RNA carries amino acids to the ribosome during protein synthesis

A

tRNA

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7
Q

Template for protein synthesis

A

mRNA

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8
Q

2 parental strands of DNA are copied into 2 daughter strands

A

DNA replication

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9
Q

Each cell receives 1 parental strand and 1 daughter strand

A

semiconservative replication

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10
Q

Enzyme that synthesizes 2 nucleotide strands

A

DNA polymerase (POL III)

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11
Q

Enzyme that removes any mistaken base pairs

A

DNA exonuclease (POL I)

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12
Q

Enzyme that seals gaps and joins the 2 strands together

A

DNA ligase

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13
Q

Group of protein that recognize the origin of replication

A

DNA A Protein

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14
Q

Unwind the double helix ahead of replication fork

A

helicase

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15
Q

Remove supercoils that interfere with the further unwinding of the double helix

A

DNA topoisomerase

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16
Q

Leading strand is synthesized continuously in a _____________ direction by DNA polymerase

A

5’ to 3 ‘ direction

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17
Q

Synthesizes a short RNA primer which is extended by DNA polymerase III

A

RNA polymerase (primase)

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18
Q

Enzyme responsible for making mRNA

A

RNA polymerase

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19
Q

Helps the core enzyme attach more tightly to specific deoxyribonucleotide sequence of promoter region

A

sigma factor

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20
Q

Binding of RNAP holoenzyme to template at promoter site

A

Template binding

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21
Q

First nucleotide (usually a purine) associates with initiation site on B subunit of enzyme

A

Initiation

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22
Q

Successive residues are added to 3’ terminus with sequence dictated by base pairing rules

A

Elongation

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23
Q

This must occur to provide access for appropriate base pairing

A

DNA unwinding

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24
Q

Recognizes the termination signal. An ATP-dependent RNA-DNA helicase

A

rho factor

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25
start codon for bacteria
formyl methionine
26
blocks assembly of the ribosome during initiation
streptomycin
27
blocks peptide bond formation during elongation
Chloramphenicol
28
blocks the second site on the ribosome during elongation
Tetracycline
29
blocks translocase during elongation
Erythromycin
30
What is the source of nutrient of bacteria
Glucose
31
the site on a DNA molecule that carries the code for a certain cell function
Gene
32
Process that occurs when a sufficient number of bacteria are present and producing a specific small molecule, virulence, and other genes are turned on
Quorum sensing
33
This protein prevents gene expression by binding to a specific DNA sequence called the operator, blocking the RNA polymerase from initiating transcription at the promoter sequence
Repressor protein
34
Binds to a specific DNA sequence and assists the RNA polymerase in the initiation steps by an unknown mechanism
Apoinducer
35
Responsible for the degradation of the sugar lactose
lactose (lac) operon
36
Indicate low glucose levels and the need to utilize alternative metabolic pathways
Increased cAMP levels
37
Contains the structural genes necessary for tryptophan biosynthesis and is under dual transcriptional control mechanism
tryptophan operon
38
example of operon that exhibits repression
Tryptophan
39
any change in the base sequence of the DNA
mutation
40
type of mutation that involves the addition or deletion of 1 or more bases
Frame shift mutations
41
type of mutation that involves one base change in DNA
point mutation
42
Single base substitution in the 3rd base nucleotide position of a codon. NO change in amino acid
Silent mutation
43
Single base substitution in 1st or 2nd base nucleotide position of a codon. Results in change in amino acid
Missense mutation
44
single base substitution that yield a stop codon
Nonsense mutation
45
Example of alkylating agents
Formalin, nitrogen, mustard, ethylene oxide
46
chemical mutagen that mimics a nitrogen base
base analogs
47
Example of intercalating agents that inserts into DNA and pushes bases apart. It is a chemical produced by peanut and grain molds
Aflatoxin
48
Physical mutagen that causes the formation of t=t dimers
nonionizing radiation
49
Damages DNA by causing the formation of free radicals leading to mutations.
Ionizing radiation
50
Process by which bacteria take up fragments of naked DNA and incorporate them into their genomes
Transformation
51
A mating process between a donor F+( bacteria with fertility factor= plasmid) and an F -recipient cell
Conjugation
52
Big chunks of DNA that randomly excise and relocate on the chromosome
Transposons (jumping genes)
53
Transposition causes antibiotic resistance in this bacteria
Staph. aureus - methicillin resistant Staphylococcus aureus strain
54
the transfer of genetic material from donor bacteria to recipient bacteria via transducing agent
transduction
55
Type of transduction if the phages in question transfer particular genes ( usually those adjacent to their integration sites in the genome)
specialized transduction
56
Type of transduction if incorporation of DNA sequences is random bacause of accidental packaging of host DNA into the phage capsid
Generalized transduction
57
Incorporation of extra chromosomal DNA into the chromosome
Recombination
58
Recombination that occurs between closely related DNA sequences and generally substitutes one sequence for another
Homologous (legitimate) recombination
59
Recombination that occurs between dissimilar DNA sequences and generally produces insertions or deletions or both
Nonhomologous ( illegitimate) recombination
60
Manipulation of the DNA to change its structure
Genetic engineering or recombinant DNA technology
61
What are basic components of genetic engineering
cloning and expression vectors, DNA sequence, enzymes, DNA ligase
62
Engineered to have a site for insertion of foreign DNA
cloning vectors
63
Used to cleave DNA reproducibly at defined sequences
Restriction enzymes
64
Ligation of the vector with the DNA fragments generates a molecule called __________
recombinant DNA
65
The DNA to be cloned can be obtained by purification of chromosomal DNA from cells, viruses, other plasmids or selective amplification of DNA sequences by a technique known as _______
polymerase chain reaction
66
cuts both strands of the DNA in a gene so that the gene will be disabled
Cas 9 protein
67
Uses a single, all purpose enzyme called cas 9 to do the slicing
CRISPR system
68
+ glucose; - lactose
operon off
69
- glucose; + lactose
operon on