microbiology Flashcards
(28 cards)
classify virus based on
- nucleic acid
- replication strategies( Baltimore system)
- capsid shape
- size
- enveloped or naked
types of capsid symmetry
- icossahedral ( naked or enveloped)
2. helical ( all enveloped)
types of virus
DNA, RNA
eg of viral disease
chickenpox, CMV, Dengue hepatitis, herpes, HIV, influenza, meningitis, mumps, polio, rubella, shines, warts, yellow fever
viral attachment eg?
influenza: silica acid receptor
rabies: ach receptor
HIV: CD4
viral tropism types
- cellular tropism ( HIVvs rabies)
- tissue tropism ( influenza)
- host tropism ( myxoma)
classify bacteria based on
- macroscopic( nutrient or selective medium)
- microscopic ( size, shape, gram stain, endospores, configuration)
- metabolism ( aerobic, nutritional, enzyme)
- antigenicity ( serotyping)
- Genotyping: PCR, plasmid, ribotyping
2 sporing gram +ve bacilo?
aerobic bacillus, aerobic clostridium
classify fungi based on
growth form: filamentous VS yeast
Type of infection: superficial mycoses vs deep mycoses
types of fungal disease
superficial, cutaneous, subcutaneous, systemic, opportunistic
2 broad strategies in dx microbial infection
- direction detection of pathogen( microcopy or culture) or part of it( antigen, nucleic acid)
- detection of a pathogen specific immune response ( serology)
different microscopy for bugs
- bright field
- dark field( thin organism, spirochetes)
- fluorescent (virally infected cells)
- electron ( molecular techniques)
2 common stains
- gram stain
2. acid fast stain( red if mycobacteria)
types of culture media
nutrient, selective, special purpose
blood agar for
haemolysis
chocolate agar for
fastidious bugs( access GF in red cell: Haemophilia influenza)
macconkey agar for
gram -ve rods: Lactose fermenter from GIT, GUT
sabouraud agar for
yeast and fungi: candida
Lowenstein-Jensen medium for
TB
Charcoal agar for
pertussis
growth conditions in cultures
- aerobic
- temperature
- length of growth
types of viral culture
- culture cell line
2. in vivo
detection of virus
- NAAT( PCR, RT-PCR, ligase chain reaction , quantify viral load)
- antigen( latex agglutination, immunochromatography, enzyme immunoassays, radioimmunoassay, imumofluorescence
types of immunofluorescence
- direct( antigen of virus)
2. indirect( viral specific antibody)