Microbiology: Lower GI and Viral gastroenteritis Flashcards

1
Q

What are characteristics of Campylobacteriaceae?

A

Gram neg Rods
(“gull shaped”)

Microaerophilic

oxidase +

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2
Q

What are complications of Campylobacter Enterocolitis?

A
  • *Guillain Barre Syndrome**
  • -> likely due to autoimmunity

Reactive Arthritis (Reiters syndrome)
Also follows inflammatory diarrheas
Affects urinary tract, eyes, skin, mucus membranes

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3
Q

What serogroups of Vibrio cholerae produce cholera toxin?

A

O1 and O139

<5% of O2-O138 make CT

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4
Q

What are characteristics of Vibrionaceae?

A

Gram negative

Comma-shaped rods

Glucose fermenters

Oxidase +

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5
Q

What are clinical signs of Cholera gravis?

A

*Rice Water stool*

Peripheral pulses absent

Decreased BP

Sunken eyes

  • *Poor skin turgor**
  • Skin tenting
  • Washer woman’s hands

Hyperventilation

Muscle cramps

No neutrophils ==> secretory diarrhea

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6
Q

What is the pathogenesis of V. cholerae?

A
  1. colonize small intestine using colonizing fimbriae called “toxin co-regulated pili” (Tcp-pili)
  2. Produce cholera toxin, leading to hypersecretion of fluid and electrolytes into intestinal lumen
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7
Q

What is the mechanism of cholera toxin?

A

A subunit:
- activates adenyl cyclase via ADP ribosylation of GTP-binding protein

B subunit:
- binds to GM1 ganglioside molecules

(same as ETEC LT)

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8
Q

How is cholera diagnosed?

A

Culture of rectal swab or stool:

  • Selective agar (TCBS agar)
  • Agglutination with anti-O1 or anti-O139 antiserum

Serological diagnosis:
best 2 weeks after exposure
decreases 2 months after exposure

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9
Q

What are clinical manifestations of Vibrio parahaemolyticus?

A

Acute, watery diarrhea
(occasionally bloody)

Severe cramping, abdominal pain

Vomiting

Short incubation period (hrs after exposure to undercooked or raw seafood)

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10
Q

How does bacterial and viral gastroenteritis differ in:

  1. Duration
  2. Nature of diarrhea
  3. Fecal leukocytes
  4. Treatment
A

Bacterial:
1-2 weeks duration
Mostly bloody/mucoid diarrhea
(except ETEC, v. cholerae, etc)
Fecal leukocytes present
Antibiotics in some cases and rehydration to treat

Viral:
2-3 days duration
Loose and watery diarrhea
NO fecal leukocytes
Rehydration to treat

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11
Q

What is the most common viral cause of gastroenteritis?

A

Rotavirus

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12
Q

What are common viruses of the GI tract?

A

Rotaviruses

Caliciviruses
(noroviruses and Sapoviruses)

Adenoviruses

Astroviruses

Coronaviruses

(All are non-enveloped!)

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13
Q

What are characteristics of Rotavirus?

A

dsRNA genome
(segmented)
–> Replication in cytoplasm

non-enveloped

Icosahedal double-shelled capsid

at least 4 serotypes

Reassortment between related species

Infectious after proteolytic cleavage of capsid protein VP4

(Winter diarrhea)

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14
Q

What are the different types of reassortment that ocurs between viruses?

A
  • *Antigenic Drift**
  • Small mutations occur
  • *Antigenic Shift**
  • New strain developed by interaction between strains
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15
Q

Who are most at risk of a rotavirus infection?

A

Infants (< 2yrs old)

–> by age 3, virtually every child has been exposed

Adult infection is extremely rare

Infection peaks in winter

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16
Q

What is the pathogenesis of rotavirus?

A

Infects enterocytes in small intestinal villi

–> replication damages transport system resulting in impaired Na transport and osmotic diarrhea

–> replicated virus released into intestinal lumen

17
Q

What are symptoms of a rotavirus infection?

A

Incubation: 1-2 days

Vomiting

upset stomach

watery diarrhea

High fever (102.2+)

Loss of appetite

Severe Dehydration

Mucus in stool

May last 5-8 days

18
Q

How is rotavirus diagnosed?

A

Virus isolation from stool

Antibody titer

ELISA

Absence of fecal leukocytes in stool

RT-PCR

19
Q

What are characteristics of Noroviruses?

A

Icosahedral, non-enveloped

+ssRNA genome
(cytoplasmic replication)

Heat resistant
(common in shellfish, and cooking may not eliminate)

Chlorine resistant

Leading cause of food borne disease in US

(stomach flu/winter flu)

20
Q

What is the pathogenesis of norovirus?

A

Broadening and blunting of villi of proximal small intestine with intact mucosa

  • Cellular (CD8+ Tcells, neutrophils) infiltrate and cytoplasmic vacuolization
21
Q

What are symptoms of a norovirus infection?

A

Nausea, vomiting, diarrhea, abdominal cramps, headache, fever, chills, myalgias, and/or sore throat

Vomiting more frequent than diarrhea

Stools are non-bloody, lack mucus, loose to watery

Severe dehydration and loss of electrolytes

Self-limiting with symptoms resolving spontaneously in 24-48hrs

22
Q

How is norovirus diagnosed?

A

Absence of fecal leukocytes

RT-PCR for nucleic acids

Antigen detection, specific, but less sensitive than PCR

Rapid tests

23
Q

What are characteristics of adenovirus?

A

ds linear DNA

Icosahedral capsid

Largest non-enveloped virus

AT least 52 serotypes known

(replicates in nucleus)