Midterm Flashcards
(121 cards)
What characteristics are considered in classifying viruses?
host range, virion morphology, nucleic acid type, specific genes, phylogenetic groupings
What is the suffix for phylogenetic order?
ales (virales)
What is the suffic for subfamily?
inae (virinae)
What is the suffix for genus?
virus
What are the steps in viral replication known as the “eclipse” phase?
uncoating –> assembly
Which viral families an replicate in either the cytoplasm or nucleus?
retroviruses, hepadnaviruses
Which types of viruses replicate in the nucleus?
most DNA viruses and orthomyxo (exception: pox)
What types of viruses replicate in cytoplasm?
most RNA viruses and pox
What two virus families have a ssDNA genome and replicate using host DNA replication system?
circo and parvo
What are the two important RNA dependent RNA polymerases? What do they do?
replicase - copies viral RNA to produce progeny genomes
transcriptase - produces mRNA
What kind of replication system is retroviruses?
SS + RNA with DNA intermediate (integrates into host genome)
What are the 3 enzymatic activities of reverse transcriptase?
- RNA dependent DNA polymerase
- RNase H activity (degrades RNA from RNA/DNA hybrids)
- DNA dependent DNA polymerase
What step is required right before a virion becomes infectious?
cleaving Gag and Gag/Pol polyproteins
What is the definition of a quasispecies?
source of phenotypic variants that can rapidly respond to selective pressures by shifting population composition
What are the 4 determinants of tissue tropism?
susceptibility, permissivity, accessibility, defense
What are the 3 main functions of Type 1 interferons?
resistance to viral replication
increase MHC class 1 and antigen presentation
activate NK cells
How does the virus entering cell turn on the antiviral response?
TLRs –> IFNs –>ISGs –> Antiviral response
What cell types do DNA viruses “transform”?
primary non-permissive
What cell types do RNA viruses transform?
permissive or non-permissive
What types of oncogenes are involved in DNA virus transformation?
unique early viral genes, essential for replication
What types of oncogenes are involved in RNA virus transformation?
c-onc or homologue (v-onc), non essential for replication
What is the MOA of transformation with DNA viruses?
inhibit stop signals, inactivates TSP
What are the 2 MOA of transformation in RNA viruses?
activate go signals
- transduction : v-onc
- insertional mutagenesis: near c-onc
How does the interaction of transformation differ between RNA and DNA viruses?
RNA = steady state productive
both can be non-productive or integration