Module 1 Lecture 4: Axon Guidance Flashcards

1
Q

main characteristic of the growth cone

A

engine and navigator of axon guidance

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2
Q

what major cytoskeletal systems are essential for dynamics

A
  1. microtubules (MTs) (common in cell division - spindle)
  2. actin (makes up thin filaments in muscles to shorten them)
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3
Q

how are microtubules and actin assembled

A

from monomers into polymers

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4
Q

what are the two poles of the polymers

A

fast growing plus and slow growing minus ends
- structurally and kinetically distinct

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5
Q

where does the plus end of the polymer point

A

toward the leading edge of growth cone

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6
Q

what drives growth cone movement

A

new polymer assembly

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7
Q

what composes the peripheral domain

A
  • long, bundled actin filaments in filopodia (exploratory structures)
  • crosslinked actin networks in veil-like structures between filopodia
  • individual, dynamic ‘pioneer’ microtubules which reach along actin bundles
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8
Q

what composes the central domain

A
  • stable, bundled microtubules enter the growth cone from the axon shaft
  • organelles, vesicles
  • central actin bundles
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9
Q

what is the transition zone in the growth cone composed of

A
  • interface between peripheral domain and central domain
  • ‘actin arcs’: contractile actin-myosin structures (similar to muscles); perpendicular to actin bundles of the peripheral domain
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10
Q

treadmilling

A

internal retrograde flow of actin with no net growth cone movement

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11
Q

how do microtubules contribute to axon guidance

A

necessary for movement
- no new microtubule polymerization = no forward movement
- dynamic microtubules (pioneers out in peripheral domain) also important for steering

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12
Q

how does actin contribute to axon guidance

A

necessary for guidance
- growth cone without actin dynamics can move but cannot navigate
- growth cones turn in the direction of net actin assembly

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13
Q

retrograde flow (‘idling engine’)

A

actin assembled at the leading edge but pulled back at the transition zone by myosin
- no (or little) net movement

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14
Q

what is a clutch

A

in a car, a mechanical system that connects rotational motion produced by the engine to the wheels

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15
Q

what is the clutch made up of in the growth cone

A

protein assemblies that physically link the actin cytoskeleton to the substrate

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16
Q

how does the clutch affect growth cone movement

A

actin assembly pushes the leading edge forward and myosin pulls the rest of the growth cone to follow
- movement! treadmilling stops

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17
Q

what is the adhesive substrate-bound cues (the roadway)

A
  • cell adhesive molecules (CAMs) and cadherins
  • extracellular matrix (laminin and fibronectin)
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18
Q

what are the repellent substrate-bound cues (the roadway guard rails)

A
  • slits and ephrins
  • chondroitin sulphate proteoglycans
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19
Q

what is the receptor for the substrate-bound, attractive, ECM (laminin and fibronectin)

A

integrin

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20
Q

integrin receptor function

A

links extracellular matrix to actin (clutch component)
- growth cones can switch integrin composition through development to alter their responses

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21
Q

what is the receptor for the substrate-bound, repulsive, extracellular matrix (Chondroitin sulphate proteoglycan)

A

protein tyrosine phosphatase (PTP) sigma

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22
Q

protein tyrosine phosphatase sigma receptor function

A

Chondroitin sulphate proteoglycan binding to protein tyrosine phosphatase sigma inhibits axon growth through signaling to the actin cytoskeleton

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23
Q

what are the substrate-bound, attractive, cell surface molecules (the surface is another cell, not extracellular matrix)

A
  • cell adhesion molecules (CAMs)
  • cadherins
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24
Q

cell adhesion molecules characteristics

A
  • bind other CAMs on other cells
  • binding can be with same (homophilic) or different CAM (heterophilic)
  • intracellular domain links to cytoskeleton (clutch component)
    -eg NCAM, L1-CAM, APCAM
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25
26
characteristics of cadherins
- Ca2+ dependent adhesion molecule - homophilic binder - clutch component - eg Cadherin, N-Cadherin
27
what does APCAM coated bead placed on growth cone cause
engagement of clutch
28
types of axon-axon interactions
fasciculation, defasciculation, selective fasciculation, selective defasciculation
29
Post Optic Commissure (POC) function
connects two clusters of ventral neurons in the forebrain of zebrafisu
30
characteristics of pioneers and followers in the POC
pioneers and followers move at the same rate except at the midline (a decision point) - at the midline, pioneers slow down, followers do not - pioneers and followers have different shaped growth cones
31
why do pioneers slow down at the midline
its growth cone samples the guidance cues
32
why do followers not slow down at the midline
1. more compact growth cone does not engage as many environmental cues 2. receives additional guidance cues directly from pioneer axon
33
what is another possibility for the different rates of pioneers and followers
may be intrinsic (molecular) differences between pioneers and followers that make pioneers more capable pathfinders
34
what are types of substrate-bound, repulsive, secreted or cell surface molecules
slits, and ephrins
35
slit characteristics
secreted, but remain surface bound (minimal diffusion) - receptor: Robo (short for roundabout)
36
ephrin characteristics
cell surface molecule - receptor: Eph
37
what does signaling through Robo and Eph receptors effect
cytoskeletal dynamics - not clutch components
38
what does bath application of slit cause
growth cone collapse and retraction
39
what are the diffusible chemotropic cues (the road signs)
- classic guidance molecules (netrins and semaphorins) - morphogens and growth factors (Wnt, Shh, BMP, adnBDNF) - neurotransmitters - secreted transcription factors
40
netrin characteristics
attractive cue - receptor: DCC
41
semaphorin characteristics
repulsive cue - receptor: Plexin
42
what does signaling through DCC and semaphorin receptors affect
cytoskeletal dynamics
43
what does bath application of Sema cause
growth cone collapse and retraction
44
what does Netrin application from the left cause
growth cone turning to the left
45
are commissural axons guided exclusively by FP-derived netrin 1 gradient?
no
46
how does Netrin affect commissural axons in dorsal spinal cord explants
they will orient toward a cell culture aggregate expressing netrin (in vitro)
47
how does Netrin affect isolated growth cones
will turn toward a source of soluble Netrin (in vitro)
48
what does a floor plate graft cause
causes commissural axons to exit the spinal cord and grow toward it (in vivo, gain of function experiment)
49
where is Netrin (mRNA) expressed
both at the floor plate and in the ventricular zone
50
how does genetic ablation of the floor plate affect ventricular zone netrin
does not affect it
51
is netrin in floorplate crucial?
no, it is dispensible -ventricular zone netrin is sufficient to support midline crossing
52
characteristics of netrin in wild-type
netrin is produced by progenitor cells in the ventricular zone -those progenitor cells deposit netrin protein to the pia surface - commissural axons use this surface bound netrin path to find their way down to the plate
53
characteristics of FP-netrin1-/-
does not cause an overt phenotype wrt midline crossing
54
characteristics of VZ-netrin1-/- (while keeping floorplate source)
leads to disorganization of commissural axons at the dorsal spinal cord and significant reduction in midline crossing
55
what happens if a growth cone is co-expressing the DCC and UNC5receptors
Netrin becomes repulsive
56
commissural neuron path
1. move away from roof plate 2. move ventrally 3. find the floor plate and cross 4. do not cross back 5. move anteriorly toward brain
57
what cue does the commissural neuron depend on when moving away from roof plate
BMP (from roof plate) - receptor: BMPR1B - repulsive
58
what cue does the commissural neuron dependon when moving ventrally
Netrin (follows pia bound netrin) - receptor: DCC - attractive
59
what cue does the commissural neuron depend on when finding the floor plate and crossing
Netrin, Shh (Shh from floor plate important for crossing; local Netrin activity may still be required for error-free crossing) - receptor: DCC, BOC - attractive
60
what cue does the commissural neuron dependon when not crossing back
slit (floor plate expresses slit. pre-crossing axons unresponsive; become responsive post-crossing) - receptor: Robo - repulsive
61
what cue do the commissural neuron depend on when moving anteriorly toward brain
Wnt4 (anterior (high) -- posterior (low) gradient in the floor plate. different Wnt and direction compared to AP patterning) - receptor: Fz3 - attractive
62
what do the Drosophila midline glia express
Netrin and SLit
63
when do commissural neurons respond to Netrin
with receptor Frazzled (DCC homolog) requires contacting surface-bound Netrin
64
when is Robo active vs downregulated
- downregulated precrossing --> no repulsion - active post- crossing --> no turning back
65
Commissureless (Comm) function
down-regulates pre-crossing robo; Comm itself is down-regulated post-crossing
66
what happens with no Comm
no crossing
67
what happens with no robo
go round and round the midline (roundabout)