Molecular Biology 3 Flashcards

(34 cards)

1
Q

what are mutations?

A

permanent alteration in a DNA (gene) sequence

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2
Q

what causes mutations?

A

errors in DNA synthesis that can occur spontaneously at low frequency, chemical mutagens, ionising radiation

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3
Q

what are the different types of substitution mutations?

A

conservative, non-conservative and no mutation

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4
Q

what is a conservative mutation?

A

amino acid is replaced by one with similar properties

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5
Q

what is a non-conservation mutation?

A

amino acid is replaced by one with different properties

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6
Q

what is no mutations?

A

a change in the third position of the codon does not change an amino acid

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7
Q

what is the effect of an insertion/deletion?

A

causes a frame-shift which synthesises a protein that has a completely different sequences downstream of the mutation

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8
Q

what does a stop codon do?

A

premature or delayed termination

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9
Q

what is sickle cell anaemia caused by?

A

single-base substitution in the beta-chain of haemoglobin

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10
Q

what is the substitution in sickle cell anaemia?

A

glutamic acid is replaced with valine

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11
Q

what does gene cloning produce?

A

large numbers of copies of a particular piece of DNA

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12
Q

how are genes usually cloned?

A

by isolating them using restriction enzymes, gel electrophoresis and then inserting into a plasmid

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13
Q

what do restriction enzymes do?

A

cut double-stranded DNA at specific DNA sequences

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14
Q

what is good about sticky ends

A

they allow DNA fragments to re-associate by base pairing

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15
Q

what is gel electrophoresis used to do?

A

separate DNA fragments on basis of their size

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16
Q

what is step 1 of gene cloning?

A

restriction enzyme is chosen that cuts on either side of the gene but not in the middle

17
Q

what is step 2 of gene cloning

A

the gene is separated from other DNA fragments by gel electrophoresis

18
Q

what is step 3 of gene cloning

A

suitable plasmid is linearised (cut at one point) using the same restriction enzyme

19
Q

what is step 4 of gene cloning

A

the cut plasmid and gene are mixed, and the sticky ends of the plasmid and gene are allowed to anneal

20
Q

what is step 5 of gene cloning

A

the annealed ends are covalently joined using DNA ligase

21
Q

what is step 6 of gene cloning

A

the plasmid, now containing the gene of interest, is introduced into the host bacterium

22
Q

what is step 7 of gene cloning?

A

the bacteria are grown into a colony, using antibiotic resistance genes in the plasmid to select colonies containing plasmids

23
Q

what is step 8 of gene cloning

A

cloned cells are lysed and the plasmids isolated by centrifugation

24
Q

what is step 9 of gene cloning

A

plasmids are cut with the restriction enzyme, releasing the cloned gene

25
what is DNA sequencing used for?
used to determine base sequences of DNA
26
what does DNA sequencing do?
work out the structure of a gene or an entire genome
27
what are the reaction components of DNA sequencing?
single-stranded DNA template, primer, deoxynucleotides, dideoxynucleotides, DNA polymerase, label
28
what is step 1 of DNA sequencing
DNA to be sequenced is mixed with primer
29
what is step 2 of DNA sequencing
primer binds to 3' end of DNA
30
what is step 3 of DNA sequencing
DNA primer mecture divided into 2 separate reaction tubes
31
what is step 4 of DNA sequencing
chain synthesis proceeds in each of the four reaction mixtures
32
what is step 5 in DNA sequencing
gel electrophoresis separation of reaction products - band corresponding to each position of chain termination appears
33
what is step 6 of DNA sequencing
DNA bands detected by autoradiography or by laser in an automated sequencer
34
what is step 7 of DNA sequencing
DNA sequence can be deduced from the pattern of bands in the four lanes