Nucleic Acids Flashcards
Building Blocks of DNA and RNA
5C sugar
Nitrogenous Base
Phosphate Group
C 1
glycosidic bond to base
C 2
Hydroxyl group in RNA
no O in DNA
C 3
Hydroxyl group in DNA and RNA
joins to C5 thru phosphodiester bonds
C 5
linked to phosphate group
joins C3 thru phosphodiester bonds
AT H-bonds
2
GC H-bonds
3
DNA Backbone
Hydrophilic sugar phosphate backbone
negative charge
High GC content
High Tm
High AT content
Low Tm
DNA Gyrase
Converts cyclic DNA to supercoiled form
DNA Topoisomerase II
Converts supercoiled DNA to cyclic DNA
inhibited by quinolones
Histones
rich in lysine and arginine (+ aa)
bind strongly to DNA
Eukaryotic mRNA
5’ end has m7G- cap
3’ end has poly A tail
Eukaryotic rRNA sizes
40S, 60S, 80S
Prokaryotic rRNA sizes
30S, 50S, 70S
tRNA
Covalently linked to specific aa
CCA-3’ terminus- aa attachment site
tRNA Anticodon Loop
determines aa specifically by base pairing with mRNA during translation
hnRNA
heterogenous nuclear RNA
represents mRNA in various stages of processing in nucleus of eukaryotes
snRNA
small nuclear RNA
only in nucleus of eukaryotes
combine with proteins to make snRNPs
snRNPs
used for splicing hnRNA to form mRNA
Ribozymes
RNAs that act as enzymes