Nucleus Worksheet Flashcards

(32 cards)

1
Q

How is the genetic material organized into functional regions?
What processes take place in each region?

A

nuclear speckles - mRNA splicing
cajal bodies - RNP
nucleolus - rRNA

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2
Q

What are nuclear speckles?

A

storage sites of splicing components, which are then recruited to actively transcribed genes where pre-mRNA processing occurs

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3
Q

What are Cajal bodies?

A

site of snRNP assembly

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4
Q

Compare euchromatin and heterochromatin.

A

eu - actively transcribed

hetero - varies according to cell type, non-transcribed, frequently located close to nuclear membrane

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5
Q

What is the function of the nucleolus?

A

rRNA transcription and processing, ribosome assembly

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6
Q

What are the parts of the nucleolus?

What process takes place in each region?

A

fibrillar center - location of rRNA genes
dense fibrillar component - active in transcription of rRNA
granular component - site of ribosome assembly

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7
Q

How are ribosomal RNAs processed?

A

45S pre-rRNA cleaved into 18S, 28S, and 5.8S pieces

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8
Q

Where are ribosomal proteins synthesized?

A

cytoplasm

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9
Q

Where are ribosomal proteins combined with the rRNAs?

A

nucleolus

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10
Q

What is the structure of the nuclear envelope?

A

outer nuc. membrane - cont. w/ ER
perinuc. space - lumen - cont. w/ ER
inner nuc. membrane - binds nuc. lamina and chromatin

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11
Q

What are nuclear pores?

A

nucleoporins form a ring, anchored to membrane and nuclear lamina, fibrils on cytoplasmic side bind cargo and direct transport through pore, fibrils on nuclear side end in basket-like structure

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12
Q

What is the nuclear lamina?

A

meshwork underlying inner nuclear membrane, provides shape and stability to nuc. envelope

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13
Q

What are the components of the nuclear lamina?

A

lamins (IF’s) and associated proteins (integral membrane proteins) - attach lamina to membrane

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14
Q

What are the clinical implications of mutations in the components of the nuclear lamina?

A

can cause diseases like Hutchinson-Gilford progeria

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15
Q

What are signal sequences?

A

read the phrase

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16
Q

Compare nuclear import signals to nuclear export signals.

A

import - basic aa, Lys. and Arg.

export - rich in leucine

17
Q

What types of molecules are transported from the cytoplasm into the nucleus?

A

histones, replication and transcription machinery, ribosomal proteins, TF’s

18
Q

What types of molecules are transported from the nucleus to the cytoplasm?

A

proteins and RNAs

19
Q

What carrier molecules are involved in nuclear import? Export?

A

importins and adaptors

exportins

20
Q

How do protein modifications regulate the transport of cargo between the nucleus and the cytoplasm?

A

modifications act like address labels, tells the protein that it needs to go in or out

21
Q

What is the function of small GTPases?

A

molecular switches

22
Q

What is Ran?

A

controls directionality of movement through nuclear pore

23
Q

What are GTPase activating proteins? (GAPs)

A

stimulates intrinsic GTPase activity

24
Q

Where is Ran-GAP localized in the cell?

25
What are guanine nucleotide exchange factors? (GEFs)
molecules that promote exchange of GDP for GTP
26
Where is Ran-GEF localized in the cell?
nucleus
27
What is the Ran cycle?
cytoplasm: RanGAP stim. RanGTP --> RanGDP ----> nucleus | nucleus: RanGEF stim. RanGDP --> RanGTP ----> cytoplasm
28
What is the mechanism of Ran dependent transport for IMport?
(c) NLS recognized by importin, importin/cargo goes through pore, (n) Ran/GTP binds to importin, complex disrupted, cargo released into nucleus, importin-Ran/GTP exported out through pore, (c) RanGAP stim. RanGTP --> RanGDP, importin released
29
What is the mechanism of Ran dependent transport for EXport?
(n) cargo, NES, exportins, and RanGTP form complex, go through pore, (c) RanGAP stim. RanGTP --> RanGDP, cargo and exportin released
30
What is the mechanism of Ran indepedent transport?
(n) molecule bound by exporter complex, goes through pore, (c) helicase releases molecule
31
What type of molecules are transported by Ran independent transport?
mRNA
32
What is the structural organization of the nucleus?
heterochromatin, euchromatin, and chromosomes