Oxidative Phosphorylation Flashcards

(42 cards)

1
Q

Why is oxygen needed in energy generation

A

Acceptor electrons and H from the electron transport chain

Allows electrons to constantly move down to generate energy for proton movement for atp synthesis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

How does electron movement down transport chain cause proton movement to intermembrane

A

Movement is exergonic (releases free energy)

This energy is used to move protons through the electron carriers (as channels)

= create a proton motive force for atp generation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

What is the energy generated from electrons called

A

Electron motive force

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What 2 factors allow proton motive force to be maintained (to move protons into ATPase

A

Ph gradient (low ph and high electrical potential in intermembrane)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Explain the structure of the mitochondria and why it’s important in oxidative phosphorylation

A

Double membrane

Outer membrane
Intermembrane space
Inner membrane (cristae)
Matrix

Inner membrane is folded to allow many ATPase and ETC to generate more atp

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What is the first electron carrier protein in the chain which allows the acceptance of 2 e/H from NADH to FMN

A

NADH oxidoreductase

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What does NADH oxidoreductase do (how electrons move to ubiquinone Q)

A

It transfers the 2 electrons from NADH to FMN

FMN2 (reduced) transfers the electrons

To FeS clusters

Electrons from FeS clusters then transferred to Q

Ubiquinone is then reduced = QH2

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What is ubiquinone called when reduced by the electrons from Fe s clusters

A

Ubiquinol (alcohol formed)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What are FeS clusters

A

Fe associated with cysteine amino acids SH(thiol)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What does FMN mean and it’s job

A

Flavin mono nucleotide

It accepts electrons from NADH to be reduced

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What is the result of the movement of electrons in the NADH oxidoreductase complex

A

4 protons are transported into intermembrane

Further 2 are removed from matrix to reduce ubiquinone (QH2)

Net removal - 6 H+

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What are the protons which are not transported to intermembrane but removed from matrix called

A

Chemical protons

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What happens with reduced ubiquinol (2 e and 2H)

A

It is oxidised when the electrons move to cytochrome c oxidoreductase complex

Cytochrome c oxidoreductase becomes reductase (accepts 2E and 2H)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What is the consequence of the reduction of the cytochrome c oxidoreductase complex by Q

A

Q is oxidised and recycled back to accept more protons

The electron movement in the oxidoreductase complex causes extra 4H+ pumped out

2H+ removed from matrix completely

Net loss in matrix = -6H

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Which shuttle molecule accepts 2 electrons from the cytochrome c reductase complex

A

Cytochrome c shuttle protein

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Is ubiquinone a shuttle molecule?

A

Yes, it always stays in membrane (hydrophobic)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

What type of prosthetic group allows cytochrome c to accept 1 electron at a time from cytochrome reductase

A

C type haem (contains Fe)

18
Q

Why are 2 ubiquinols (QH2) needed for cytochrome c shuttle protein to accept 2 electrons

A

Because can only accept 1 at a time

19
Q

What is the oxidation and reduction of Q called

20
Q

What occurs once cytochrome c accepts electrons from cytochrome c reductase complex

A

Cytochrome c oxidase catalyses the transfer of electrons and protons from the cytochrome c to O2

4e from cytochrome c and 4H+ from the matrix reduce 02 into H20

21
Q

What does reduction of water by 4 e and 4 h generate

A

Water and exergonic so power to pump 4 more H+ into intermembrane

22
Q

What is the net loss in the cytochrome c oxidase complex

A

8 H+

4 are pumped out due to o2 reduction, 4 are used to reduce water

23
Q

What is the net loss of H+ in the matrix compared to net gain of H+ in the intermembrane

A

Intermembrane = 12H+

Matrix = -16 H

24
Q

What are the 4 complexes in oxidative phosphorylation

A

I = NADH - Q oxidoreductase complex

II= succinate dehydrogenase- Q complex

III= Q - cytochrome oxidoreductase complex

IV= cytochrome c oxidase complex

25
How is FADH2 electrons transported to Q ubiquinone (complex II)
Accepted by succinate dehydrogenase which transports the 2E to ubiquinone which is then reduced into ubiquinol
26
What ion is needed by succinate dehydrogenase to accept electrons from FADH2
Fe (just like NADH oxidoreductase needs it and also cytochrome c has fe)
27
How does H from the intermembrane space get into ATPase enzyme complex (V)
H half channel which is on the intermembrane side of the ATPase
28
What happens when H goes into the ATPase half channel
Proton binds to the aspartate (-ve) amino acid on the c ring subunits This causes the c ring subunit aspartate to become neutral and move into the membrane (Rotation) Causing next c ring subunit to be exposed which allows New H to attach This movement drives rotation After c ring rotation protons are released through the other half channel and aspartate returns to be negative
29
What does rotation of the c ring cause to rotate (due to addition of H to make aspartate negative)
Gamma arm which attaches the c ring with beta and alpha proteins on the other side of ATPase
30
What happens when the gamma Y arm rotates when c ring rotates
Causes rotation of the beta and alpha subunits
31
Which out of the beta and alpha proteins on ATPase is bigger
Beta
32
What is attached to beta and alpha apart from the gamma Y arm
B arm
33
What causes beta arms to move in and out
When beta protein goes past it b arm is pushed out When alpha goes past b arm when Y rotates this causes b arm to move in
34
What does b arm movement in and out cause
Kinetic energy which is turned into atp synthesis Adp + pi into atp
35
At the end of oxidative phosphorylation along with glycolysis and Krebs how many ATP and O2 and H20 produced (6 cycles for glucose)
ATP = 30 generated 6 O2 are used 6 H2O are generated
36
How many NADH and FADH are present in oxidative phosphorylation
10 NADH (4 from glycolysis , 6 from citric cycle) 2 FADH2 from citric cycle
37
Which 3 chemicals can prevent oxidative phosphorylation
Carbon monoxide Cyanide Salicylate
38
How can carbon monoxide stop oxidative phosphorylation
Has high affinity to haemoglobin and binds to FE causing no oxygen into cells
39
How does cyanide stop oxidative phosphorylation
Binding to complex 4 (cytochrome c oxidase )
40
How can salicylate stop oxidative phosphorylation
Forms pores in membrane so H can move without generating ATP
41
Why is oxidative phosphorylation damaging to the mitochondria
Etc oxygen species are reactive and can cause high mutation and error rate in dna of mitochondria
42
What is the difference between cytochrome c coenzyme and ubiquinone Q
Q can carry 2 e and 2 H Cytochrome c only carries 1 via the haem group