paper3 Flashcards

(83 cards)

1
Q

how do lymphocytes distinguish between slef/ non-self cells`

A

each cell has specific molecules on its surface w specific shapes these can be used to identify it

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2
Q

how are antigens used in immune response

A

they are located on surface of pathogen and trigger response from lymphocyte

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2
Q

state non specific immune response

A

non-specific = phagocytosis

  • agglutination of atigens as sntibodues stick them togeather in clumps
  • The phagocyte is attracted to the pathogen by non-self ANTIGEN.
  • The pathogen is ENGULFED and enclosed in a PHAGOSOME (vesicle).
  • LYSOSOMES (made by Golgi) (contain
    lysozyme enzymes) fuse with the phagosome.
  • Lysozymes enzymes hydrolyse molecules and break down the pathogen
    (then exocytosis of products)
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2
Q

describe process of antigenic variability

A

mutation occur in specific gene responsible for the antigen

any previous immunity to pathogen will be lost

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2
Q

describe the barriers blocking pathogens entering the body

A

skin is a physical barrier that blocks pathogens

stomach acid is a chemical barrier blocking pathogens

white blood cells are the next defence

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2
Q

state the specific immune response

A

specific = t lymphocyte

the t cells originate i the thymus thats where the t comes from

1) Pathogen enters the body.
2. Phagocyte cells engulf and destroy pathogen and present pathogen’s antigen on their surface.
3. Antigens have a specific tertiary structure. T-cells with a complementary receptor bind. Cytotoxic T cells, kill infected body cells.
4. Helper T-cells stimulate B-cells.
5. B-cells undergo mitosis to clone & make plasma cells.
6. Plasma B cells produce (monoclonal) antibodies.
7. B cells divide (by mitosis) to form Memory B-cells & T-cells divide to form Memory T-cells.
8. More antibodies are produced faster in the secondary immune response. also known as ACTIVE immunity

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2
Q

desc struct of antibody

A
  • Y-shaped
  • 2 long polypeptide chains - 2 short polypeptide chains
  • constant region
  • variable region / antigen-binding site at ends
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3
Q

whats passive immunity

A

antibodies put into organism

no long term immunity

breast milk

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3
Q

whats active immunity

A

antibodies created in response to non self antigens

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3
Q

describe how we can target medication to specific cells by the use of antibody.

A
  • monoclonal antibody created that has binding site complementary to that of an antigen on the outside of the cancer cell these are also attcahed to drugs
  • cancer drugs are delivered straight to the cell and are killed this is good as it means that there are lesss negative implications when compared to treatments such as chemotherapy and radiotherapy
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3
Q

define vaccine

A

a dead or inactive form of the pathogen that gets injected into the body

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3
Q

what happens after vaccination

A
  • exposure to antigen activate b cell to differentiate
  • b cell undergo mitosis and make large numbers of cells these then differentiate into plasma cells or memory cells
  • plasma cells make antibodies
  • memory b cells divide rapidly into plasma cells when reinfected by same pathogen these make lots of antibodies rapidly
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3
Q

process of viral replication

A
  1. Attachment proteins attach to receptors;
  2. Viral RNA enters cell;
  3. Reverse transcriptase makes DNA from RNA;
  4. The DNA is translated (produces) into viral proteins, capsid & enzymes
  5. Virus assembled and released from cell
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3
Q

struct of hiv molecule

A

attachment proteins = on the outside of the molecule

lipid envelope = hold all the stuff

capsid = hold the rna and the reverse transcriptase

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3
Q

how does hiv result in symptoms of aids

A

virus replicate in the helper t cell this interferes w normal function of immune system

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3
Q

2 uses of monoclonal antibodies

A
  • targeting medication to specific cell types by attaching a therapeutic drug to an antibody
  • medical diagnosis.
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3
Q

uses of ant bod for med diag

A

monoclonala ntibodies could be used to diagnose pregnancy, cancer, covid

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3
Q

describe how we can prevent uncontrolled cell growth of pathogen by the use of antibody.

A
  • monoclonal antibodies binding site complementary to that of an antigen on the outside of the cancer cell
  • these attach to cancer cell and prevent chemicals binding that enable the uncontrolled cell division
  • these dont damage any other healthy cells only the
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4
Q

describe process of eliza test

A

1) add antigens to a well and wash multiple times remove any unstuck antigens

2) add complementary antibody forming antigen-antibody complexes wash removing any unbinded antibody molecules

3) Add a second antibody, with an enzyme attached.
and wash

5) Add a colourless substrate which is complementary to & binds to the enzyme’s active site if present. and produce coloured product

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4
Q

investigating translocation

A

Tracing
- only provide plants with radioactively labeled carbons
- this will be used in photosynthesis to produce sugars
- thin slices of stem placed onto xray film
- this highlights where mass is moving phloem

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4
Q

factors affecting transpiration

A

light
- the more light the more stomata that are open so more water loss

temperature
- hotter water molecules have more kenetic energy move faster / evaporate faster

humidity
- water potential outside of leaf is greater than inside this results in less evaporation

wind
- maintains the water potential gradient

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4
Q

key features aiding water moving up plant

A

cohesion tension theory
- cohesion between water molecules / hydrogen bonds makes them stick togeather create contious water column

-adhesion water molecule stick to walls of xylem thinner the xylem the greater the capillary effect

  • root pressure as more water move into root the and therefor increase the pressure within the root forces water up the root
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4
Q

formation of tissue fluid

A

1) capillaries have small gaps called fenestrations

2) as blood enter capilaries from arterioles results in high hydrostatic pressure of the blood

3) water and small molecules are forced out to surroundiing cells this is called ultrafiltration

4) towards venous end hydrostatic pressure has decreased as so much has been forced out pressure within capillary has dropped the water potential has also dropped

5) liquid then re-enter capillary via osmosis

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4
Q

process of water moving up the plant

A

1) water evaporate out stomata loss in volume create lower pressure (transpiration)

2) as water is lost more water is pulled up xylem to replace it

3) due to hydrogen bond the water creates continous column via cohesion

4) water molecules stick to walls of xylem via adhesion this further helps the movement of water up the plant

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5
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6
whats third step at nephron
3) in the loop of henle - sodium ions actively transported out of the ascending limb - accumulation of sodium ions outside nephron lower water potential - water diffuses out and then gets reabsorbed into the blood decendinng limb the walls are permeable to water as they are much thinner
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stages of light independant
calvin cycle 1) CO2 combines with RuBP , catalyzed by Rubisco in stroma 2) form two molecules of GP 3) GP is reduced to Triose Phosphate using ATP and reduced NADP 4) one carbon from Triose Phosphate is removed and goes towards creating a hexose sugar or other organic compunds and the remaining 5) carbons are used to regenerate the RuBP using energy from ATP
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stasges of light dependant
1) Photolysis of water is when light energy causes water to dissociate into protons & electrons & oxygen is produced H2O ⇌ 2H++ 2e- + ½O2 - h+ picked up by NADP->NADPH -e- passed along chain of electron carrier proteins - o2 either used in respiration or diffuse out 2) Photoionisation when light energy excites chlorophyll electrons and raises them to higher energy levels electrons are lost from chlorophyll ionising cholorophyll 3) Electron transfer chain electrons pass between electron acceptor protein provide energy for h+ to be pumped into the thylakoid lumen 4) Chemiosomotic theory proton concentration gradient results in protons diffuse through ATP synthase into the stroma ATP synthase spins releasing the energy to phosphorylate ADP with Pi forming ATP (chemical energy store) 5) the e- and h+ are use dto reduce NADP
7
fact affect photosyn
light intensity - amount of light hitting chloroplast temperature - enzyme rubisco denature co2 conc - co2 to be used if calvin cycle
7
what is a stem cell
undifferentiated cell that can continually divide and become specialized
7
describe sliding filament theory
2) Calcium ions are released from the sarcoplasmic reticulum 3) Calcium ions bind to tropomyosin this change their position revealing the Myosin binding sites on the actin molecules 4) myosin heads bind with these sites, forming actin myosin cross-bridges 5) myosin perfom power stroke and pulls the actin and release adp + pi 6) atp bind to myosin head and it detaches from the actin 7) myosin hydrolyses the atp and myosin heaad returns back to its relaxed state
7
nephron structure
afferent arteriole ~> glomerulus ~> efferent arterioles surrounding that glomerulus is the renal capsule ~> proximal convoluted tubule ~> loop of henle ~> distal convoluted tubule ~> collecting duct capillaries wrap around whole thing
7
diff between two types of muscle fiber
1) Fast twitch muscle fibres - contract rapidly - rely on anaerobic respiration for ATP supply (lactate produce fatigue quickly ) - short bursts of high intensity activity - fewer capillaries - large store of glycogen 2) Slow muscle fibres - contract slower - rely on aerobic respiration for ATP production - log duration low intensity - dense network of capillaries - small amount of glycogen present
7
whats fourth step at nephron
4) dct and collecting duct - the sodium ions atcively transported out the loop of henle the filtrate then moves to the distal convoluted tubule and is very dilute - more water diffuse out of the dct and collecting duct any remaining filtrate forms urine
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neuromuscular junction
1) presynaptic membrane carries action potential causes calcium ions to diffuse into the neurone 2) This stimulates vesicles containing the neurotransmitter acetylcholine (ACh) to fuse with the presynaptic membrane and get released 3) the acetylcholine diffuses across the neuromuscular junction and binds to receptor proteins on the sarcolemma 3) This stimulates ion channels in the sarcolemma to open, allowing sodium ions to diffuse in 4) results in depolarisation of the sarcolemma, generating an action potential that passes down the T-tubules towards the sarcoplasmic reticulum releases calcium ions
7
factors affecting blood glucose levels
increase - after eating food decrease - after exercise
7
function of kedney
- selectively reabsorb the useful molecules back into the kidney and - wont find proteins or blood cells in the urine as these are too big to be filtered from glomerulus to the renal capsule
7
name type of pressure receptor and how they work
pacinian corpuscle - sensory neurone wrapped in plasma membrane - stretch mediated Na+ ion channel when pressure is applied to these they get stretched and deformed - Na+ channel open may lead to establishment of generator potential
7
whats first step at nephron
1) ultrafiltration - high hydrostatic pressure in the glomerulus force out water and small molecules into the renal capsule -filtration first occurs when blood passes through the fenestrations in walls of capillary -the basement membrane adds another layer of filtration - podocytes = cells that wrap around the capillary and have tiny gaps adds another stage of filtration
7
returning high blood glucose levels back to the norm
1) after eating blood glucose increase 2) beta cells in islets of langerhans in pancreas release insulin (and bind to complementary shaped receptors in the liver this results in the release of chemicals into the cell results iin vesicles with channel proteins fusing with the membrane) 3) liver cells become more permeable to glucose as more channel proteins are added to the membrane result in more fac diff enzymes activated that turn glucose into glycogen 4) glucose there for removed from blood and stored as insoluble glycogen and this therefor lowers glucose levels
7
whats second step at nephron
2) selective re-absorption - glomerulus filtrate passes through the proximal convoluted tubule and the desired content gets reabsorbed back into the blood - sodium ion conc is low in pct cell as they are actively transported out of pct into the blood - sodium ion flow down the conc grad from lumen of pct to the cells in the lining of the pct carry a glucose molecule with it - glucose then diffuse from lining of the pct to the blood stream
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types of selection
stabilizing - select for the
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returning low blood glucose levels back to the norm
1) after excerise or no digestion of carbohydrates blood glucose concerntration decreases 2) alpha cells in islets of langer hans in pancreas release glucagon and adrenal gland releases adrenaline 3) glucagon attach to receptors on the liver and this results in the activation of the adenylate cyclase protein this converts ATP into cAMP 4) cAMP activates protein kinaise this is an enzyme that hydrolyses glycogen to glucose 4) glucose released back into blood rasie levels of blood glucose
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location of key areas controlling heart rate
sinoatrial node ( SAN ) - located in right atria known as pacemaker cells atrioventricular node (AVN) - located between right atria and left ventricle bundle of his - in septum Purkyne fibres - in ventricle walls
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types of speciation
allopatric - geographically isolated leading to reproductive isolation sympatric - difference in behaviour means they are reproductively isolated
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process of synaptic transmissions
1) action potential arrive at presynaptic knob 2) depolarisation of presynaptic knob result in ca2+ ion channels opening and these diffuse in 3) vesicles containing neurotransmitter move towards and bind to the presynaptic membrane and neurotransmitter is released to the synaptic cleft 4) neurotransmitter diffuse down conc grad to postsynaptic membrane 5) neurotransmitter bind to the complementary receptor sites on the postsynaptic membrane 6) Na+ ion channel open and they diffuse in may lead to depolarisation 7) neurotransmitter degraded by acetylcholinesterase and released from the receptor Na+ ion channel close and resting potential etablished
7
define epigenetics
- altering in the function of a gene without changing the base sequence of the nucleotides - these characteristics are also heritable
8
2 types of epigenetics and how they affect transcription
decreased acetylation of histones - stops transcription of the gene as dna coiled too tightly to be transcribed increased methylation of dna promoter sequence of the molecule - come from smoking and processed meat - transcription factor is unable to bind to the promoter sequence as it no longer fits so transcription stops
8
types of tumor and their properties
1) benign dont metatstecise (spread) divide at a slow rate 2) malignant do metastacise (spread) divide at rapid rate
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types of mutation
1) addition - adding an extra nucleotide result in frame shift 2) deletion - remove a nucleotide result in frame shift 3) inversion - section of bases is removed from sequence and gets replaced flipped 4) duplication - when a particular base is duplicated result in frame shift 5) substitution - a nucleotide is swapped for another one 6) translocation of bases - section of bases detach from chromosome and join onto a completely different chromosome
8
types of stem cells and how they divide
totipotent - produce any type of body cell an unlimited amount of times - only in embryo pluripotent - divide into almost every cell an unlimited amount of times present in embryos multipotent - divide to produce limited amount of cells and divide a limited amount of times bone marrow only make blood cells unipotent - divide to become only one type of cell cardiomyocites
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what are pluripotent stem cells and how can they be made
- take sample from liver - switch genes off that made those cells specialized - cells turned back into pluripotent state
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how does menopause result in high risk of cancer
increased oestrogen and therefor increased transcription as the transcription factorss are activated by the oestrogen and may result in unlimited cell division may use molecule with complementary shape to block oestrogen binding site on the tf
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how do mutations result in production of tumors
if mutation occurs in gene coding for proto-oncogene then this is converted to a oncogene and this is constantly activated and results in rapid uncontrollable cell division resulting in a tumor if mutation / methylation occurs in the promoter sequence in the dna molecule of the tumor supressing gene then these wont be expressed / transcribed result in uncontrollrd cell growth formation of tumor
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how oestrogen acts as transcription factor
- oestrogen diffuse into cell across phospholipid bilayer as it is a lipid soluble molecule - oestrogen binds to a complementary receptor on the transcription factor - this binding results in the transcription factor changing shape and binding to promoter region of the dna - rna polymeraise is stimulated and phosphodiester bonds form between adjacent rna nucleotides - mrna molecule is made and then this expresses gene
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methods of cloning fragments in macheine
invitro / pcr - temp increased to 95°C and this separates the h bonds between the base pairs form 2 single strands - decreased to 55°C and this allows primers to attach - increased to 72°C this is optimal temperature for taq polymeraise to join adjacent nucleotides
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steps in genetic fingerprinting
1) dna is collected 2) pcr may be used to create larger sample 3) restriction endonuclease enzyme used to cut dna fragment 4) samples put into wells on gel plate and electrical voltage is applied to it 5) the negatively charged dna is attracted to the positive terminal and the shorter peices move further 6) put alkali sol on the gel make dna single stranded
11
issues wit mark rel recap
- assume population size is constant and is no death birth - asssume they do redistribute evenly
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how to ensure sampling is representative
- random sampling elimminate bias - large num of samples
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mark release recapture
1) initial sample captured and marked with a mark that is all weather resistant and doesnt affect the animal 2) release marked individuals and allow them time to evenly distribute
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random sampling of non moving over even distribution
1) two tape measures lay out at right angle create gridded area 2) use random number generator to get coordinates 3) repeat atleast 30 times and calculate mean
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random sampling of non moving over non-even distribution
1) belt transect have tape measure going away from factor and then every 10cm place the quadrat 2) repeat with 30 more transects paralel to the previous one
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osmoregulation too high water potential
1) drinking lots of water increases water potential of blood 2) detected by osmoreceptors in hypothallamus 3) less ADH produced and released into the blood 4) distal conveluted tubule and collecting duct become less permeable to water 5)larger volume of dilute urine
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mark release recapture calculation
(caugth in first sample x caught in second sample) / marked in second
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5 test tubes for the photosynthesis reaction
1.chloroplast suspension and water - acts as a standard 2. Chloroplast suspension and water and dcpip but covered in foil - show importance of light 3. Water and dcpip - show chloroplast are needed 4. chloroplast suspension and water and dcpip - investigate time taken for colour to disappear 5. Chloroplast suspension and water and dcpip and ammonium hydroxide -investigate affect of adding ammonium hydroxide
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Limitations of the photosynthesis practical
Limited light from source End point is subjective Foil not blocking 100% of light
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Respirometers
- 2 test Tubes connected by a manometer containing red liquid - One had the test subject other has glass beads ensure constant volume - syringe is attached to one allows for repeats resetting liquid Liquid moves to subject
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Calculating respiration
= volume / (time * mass) Volume of cylinder = pi*r^2 * length
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Asceptic techniques to maintain sterile working conditions
Sterilise equipment before land after use to kill microbes Sterilise working surfaces Wash hands w soap Work near Bunsen Flame neck if Fleming flask
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Method of the antibiotic stuff
- Put inoculating loop in Bunsen dip in microbe and spread on pétri dish then re flame it - tape lid on plate partially so o2 can still go through - pick disks up with sterile tweezers and dip in disinfectants putting them on the agar
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What is a photometer and what does it measure
Uptake of water this is correlated to the rate of transpiration
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Setting up plant in potometer
- Cut off part of plant whilst it’s submerged under water - Fill equipment with water and add bing and petroleum jelly to ensure it’s 100% air tight - a single bubble is introduced this is used to measure rate of transpiration -
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Measuring rate of transpiration
Volume of cylinder / time taken