Population Genetics Flashcards

(30 cards)

1
Q

Population Genetics

A

the study of genetic variation in populations over time

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2
Q

Population

A

a local group of individuals of a single species within which mating is actually or potentially
occurring

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3
Q

Gene Pool

A

set of genetic information carried by all interbreeding members of a population

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4
Q

Gene

A

general term meaning the physical entity transmitted from parent to offspring during the reproductive process

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5
Q

Genotype

A

specific allele (or gene) composition of and
individual at specific gene locus

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6
Q

Polymorphism

A

Gene → can exist in many different forms or states
→ All different forms of a gene are called alleles thus for diploid organisms

Gene Locus → fixed position of the gene on both chromosomes of the chromosome pair (i.e. consists of two alleles )

Polymorphism – two or more variations for a given character
Due to two or more alleles that influence phenotype
* Polymorphic gene – two or more alleles
* Monomorphic – predominantly single allele

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7
Q

Single Nucleotide Polymorphisms (SNPs)

A
  • Smallest type of genetic change in a gene
  • Most common – 99% of variation in human gene
    sequences
  • Large, healthy populations exhibit a high level of
    genetic diversity
  • Analysis of SNPs may be important for
    personalized medicine – patient’s genotype used
    to tailor his or her medical care
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8
Q

Phenotype

A

the observable characteristics
i.e. the physical traits, or “what you see”
* Observable traits, such as height, eye colour,
and blood type.
* Some traits are largely determined by the
genotype, while other traits are largely determined by environmental factors.

  • Codominant:- 3 distinct phenotypes
  • Dominant / Recessive:- 2 distinct
    phenotypes → heterozygote will have
    same phenotype as the dominant
    allele homozygote
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9
Q

Genetic Variation

A
  • measure of the genetic differences that exist in a population
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10
Q

Intra-populational variation

A
  • measured as the amount of variation within ecologically and reproductively interacting individuals
  • within members of a species in the same area
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11
Q

Inter-populational

A
  • comparing two or more populations of a species
  • geographic variation
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12
Q

Genotype Frequency

A

number of individuals with
that genotype as a proportion of the total number of individuals

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13
Q

Allelic frequency

A

number of a particular allele as a proportion of the total number of alleles in the population

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14
Q

Allele Frequency

A

Number of copies of a specific allele in a population / total number of all alleles for that gene in the population

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15
Q

Genotype frequency

A

number of individuals with a particular genotype in a population / total number of individuals in the population

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16
Q

Hardy-Weinberg Principle

A

1- Individuals of all genotypes have equal
reproductive success = no selection
2- No new alleles are created or converted into
another by mutation = no mutation
3- Individuals do not migrate into or out of the
population = no migration
4 - Population is infinitely large = no genetic drift
5 - Individuals in the population mate randomly =
random mating

p + q = 1
p2 + 2pq + q2 = 1

17
Q

Assortive Mating

A

Occurs when individuals choose their mates based on
their resemblance to each other at a certain locus or a certain phenotype

18
Q

Positive Assortive Mating

A

when similar genotypes or phenotypes mate more often than would be expected by chance

19
Q

Negative Assortive Mating

A

when like genotypes or phenotypes mate less often
than would be expected by chance

20
Q

Gene Drift

A

Change in allelic frequency due to a chance event

Founder effect
The founder effect occurs when a small group of
migrants—not genetically representative of the
population from which they came—establish in a new
area.

Bottleneck event
After a bottleneck, a limited
number of randomly
selected individuals create
a founding population,
resulting in genetic drift

21
Q

Biological Fitness

A

Reproductive efficiency of an individual and is expressed in relative terms to other genotypes

22
Q

Convergent evolution

A
  • Two different species from different lineages show similar characteristics because
    they occupy similar environments; species are not closely related evolutionarily

Comparative Anatomy
* Analogous structures – structures which have
converged to provide a similar function, but
are dissimilar in origin e.g. wings of birds and
insects
* Homologous structures – structures that have
diverged due to selective pressures, but share
similarities due to common ancestry e.g. bone
shape, bird beaks

23
Q

Macroevolution

A
  • evolutionary changes that
    produce new species or groups
    of species
  • Large scale changes in the
    appearance of a species
  • Occur very slowly, over many
    generations
  • Fossil records – show differences
    in a species over time
24
Q

Microevolution

A
  • simply a change in gene
    frequency within a population.
  • Evolution at this scale can be
    observed over short periods of
    time — for example, between one
    generation and the next
  • Canis lupus familiaris is an
    example of microevolution as no
    new species has resulted.
    Evolution occurs on both large and small scales:
25
Natural Selection - Directional
Occurs when one phenotypic extreme is selected for * This type of selection is widely practiced in plant and animal breeding * In nature – occurs when one phenotypic extreme is selected for/against as a result of a change in the environment
26
Natural Selection - Stabilising
Favours intermediate types with both extremes being selected against * Selects against extreme phenotypes * Favours average individuals. * Reduces the population variance, but without shifting the mean. * In humans, infant mortality increases on either side of the optimal birth weight of approx. 7.5 pounds. * Individuals closer to the average for a given trait have higher fitness
27
Natural Selection - Disruptive/Diversifying
Selects against intermediates and selects for both phenotypic extremes
28
Intrasexual selection
* Males directly compete for mating opportunities or territories * Between members of the same sex * Horns in male sheep, antlers in male moose, male fiddler crab enlarged claw
29
Intersexual selection
* Members of one sex, usually females, choose their mates from individuals of the other sex based on desirable characteristics * Often results in showy characteristics for males
30
Common markers
* RFLP (Restriction fragment length polymorphism) * SSLP (Simple sequence length polymorphism) * VNTR (Variable number tandem repeat) * SSR Microsatellite polymorphism, (Simple sequence repeat) * SNP (Single nucleotide polymorphism)