protein purification Flashcards

(34 cards)

1
Q

What is one of the great promises of the biotechnology industry?

A

The ability to produce biopharmaceuticals to treat human disease

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2
Q

Who pioneered the development of recombinant DNA technology?

A

Genentech

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3
Q

What was insulin traditionally extracted from before recombinant DNA technology?

A

Pancreas glands of swine and cattle

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4
Q

How many pounds of animal pancreas glands were needed to produce one pound of insulin?

A

Approximately 8,000 pounds

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5
Q

What significant product did Genentech produce using recombinant DNA technology?

A

The world’s first commercial genetically engineered product: human insulin

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6
Q

What challenges are faced when producing novel proteins in bacteria?

A

Active proteins are often comprised of multiple chains of amino acids with complex folding and strand interactions

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7
Q

What are some considerations in developing a recombinant protein?

A
  • Cell type
  • Plasmid construction
  • Purification strategy
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8
Q

What does FPLC stand for?

A

Fast Protein Liquid Chromatography

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9
Q

What are the columns used in FPLC composed of?

A

Small particles or gel beads known as stationary phase

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10
Q

What is the purpose of the chromatographic bed in FPLC?

A

To separate the sample mixture based on different components adhering to or diffusing through the gel

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11
Q

What types of separation can FPLC columns perform?

A
  • Size
  • Charge distribution (ion exchange)
  • Hydrophobicity
  • Reverse-phase
  • Biorecognition (affinity chromatography)
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12
Q

What is a notable feature of FPLC columns compared to HPLC columns?

A

FPLC columns can only be used up to a maximum pressure of 3-4 MPa (435-580 psi)

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13
Q

Can FPLC columns be used in an HPLC machine?

A

Yes, if the pressure of HPLC can be limited

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14
Q

Fill in the blank: Genentech engineered bacterial cells to produce _______.

A

human insulin

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15
Q

True or False: FPLC and HPLC use the same type of columns without any limitations.

A

False

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16
Q

What was the first recombinant protein used in treatment and in what year?

A

Human Insulin (1982)

17
Q

What collaboration in July 2018 produced a PD-L1 antibody for immuno-oncology research?

A

Abcam Merck collaboration

18
Q

What are the three main phases in protein purification workflow?

A
  • Capture Phase
  • Intermediate Purification Phase
  • Polishing Phase
19
Q

What is the first step in protein extraction, fractionation, and enrichment?

A

Tissue or cell lysis

20
Q

List two mechanical methods used in tissue or cell lysis.

A
  • Sonication
  • Grinding
21
Q

What can be added to lysis reagents to prevent proteolytic activity?

A

Protease and phosphatase inhibitors

22
Q

At what temperature range are most proteins stable?

23
Q

What does the Hofmeister series classify?

A

Ions in order of their ability to salt out or salt in proteins

24
Q

Fill in the blank: Proteins are soluble in aqueous media because they have _______ amino acid side-chains.

25
What is the term for all chromatographic methods with a liquid mobile phase?
Liquid Chromatography
26
What type of chromatography separates proteins based on size?
Size-exclusion chromatography (SEC)
27
How do small molecules behave in size-exclusion chromatography?
Enter the beads
28
What type of chromatography uses beads with opposite charges to bind proteins?
Ion exchange chromatography
29
What do you change to elute proteins in ion-exchange chromatography?
Change the pH or increase the salt concentration
30
What is the purpose of affinity chromatography?
To purify a single protein from a complex mixture in a single step
31
What is a common tag used for protein purification?
His tag
32
What does His tag enable in protein purification?
Recovery of the labelled protein by its unique affinity
33
What technique is used to test if the correct protein is obtained post purification?
ELISA (enzyme-linked immunosorbent assay)
34
What does Western blotting test for in proteins post purification?
Is it the correct protein? Is it full length?