pyrimidine synthesis Flashcards

(36 cards)

1
Q

what is the chemical structure of pyrimidines and what are the different types ?

A

contains 1 carbon ring
cytosine
thymidine
uridine

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2
Q

how is UMP made ?

A

start off with glutamine
converted to carbamoyl phosphate
into orotic acid + PRPP
and then into UMP using UMP synthase

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3
Q

where is TMP and CMP derived from ?

A

derived from UMP

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4
Q

what is the enzyme that catalyzes the reaction between glutamine and carbamoyl synthase ?

A

carbamoyl synthetase II
CPS 2

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5
Q

what is the difference between CPS 1 and CCPS 2 ?

A

CPS 1 is found in the liver and is pat of the urea cycle
CPS 2 is involved in pyrimidine synthesis and is found in most cells

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6
Q

what disease is associated with a dysfunction in UMP synthase ?

A

orotic aciduria

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7
Q

what other disease is commonly confused with orotic aciduria ?

A

OTC deficiency

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8
Q

what is the main difference between orotic aciduria and OTC deficiency ?

A

raised ammonia levels in OT defeciency

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9
Q

what is the treatment for orotic aciduria ?

A

uridine

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10
Q

what are the clinical features associated with orotic aciduria ?

A

high levels off orotic acid in urine
megaloblastic anemia

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11
Q

when should i suspect orotic aciduria ?

A

in a baby with megaloblastic anemia that is not responding too folate treatment

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12
Q

what are the sources of the 1 ring formation in pyrimidines ?

A

carbamoyl phosphate
aspartate

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13
Q

what drug is associated with blocking the conversion of carbamoyl phosphate to orotic acid ?

A

leflunomide

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14
Q

what is the rate limiting enzyme for CPSII ?

A

UMP

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15
Q

what enzyme is inhibited by sulphonamides ?

A

dihydropteroate synthase this is in bacteria

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16
Q

what enzyme is inhibited by trimethoprim ?

A

dihydrofolate reductase this is in bacteria

17
Q

what drug blocks human dihydrofolate reductase ?

18
Q

by lab workup how can you differentiate between folate and vitamin b12 deficiency ?

A

both have a high level of homocystenuria
but there is a higher level of MMA in B12 deficiencies

19
Q

what is the clinical presentation of both b12 and folate deficiencies ?

A

folate - macrocytic anemia, neural tube defects
b12 - macrocytic anemia , neurological dysfunction ( causes demyelination )

20
Q

what is the role of folate in thee conversion of uridine into thymidine ?

A

N5. abd N10 tetrahydrofolate levels must be maintained iin order for the conversion to happen

21
Q

what is the other common phrase used to describe folate ?

A

1 carbon carrier

22
Q

what enzyme is blocked by the drug 5 FU ?

A

thymidlate synthase

23
Q

what enzyme is blocked by methotrexate ?

A

dihydrofolate reductasea

24
Q

how does 5 FU work as a chemotherapeutic agent ?

A

it mimics uracil
makes an abnormal dUMP
so no thymine is produced for cancer cells

25
what are the sources of the 1 ring found in pyrimidines ?
carbamoyl phosphate and aspartate
26
what enzyme is inhibited by the drug hydroxyurea ?
ribonucleotide redutase
27
what enzyme is inhibited by leflunomide ?
dihydroorotate dehydrogenase
28
what is the prodrug for 5 FU and what is the enzyme inhibited by this drug ?
capectabine thymidylate synthase
29
what are the after effects of giving azathioprine with another xanthine oxidase inhibitor ?
immunosuppression
30
what enzyme is blocked by mycophenolate and ribavarin ?
inosine monophosphate dehydrogenase
31
what enzyme is inhibited by cytosine arabinoside ?
DNA polymrase
32
what turns UMP into dUMP ?
ribonucleotide reductase
33
what diseases are treated hydroxyurea ?
polycythemia vera essential thrombocytosis sickle cell anemia
34
what reaction does CPSII facilitate ?
glutamine to carbamoyl phosphate CPSII stands for carbamoyl synthetase
35
CPS1 vs CPS11 ?
cps1 is purely mitochondria ( hepatic ) cps2 is purely cytosolic
36
in the pyrimidine synthesis process what process is inhibited by methotrexate and azathioprine ?
the conversion of PRPP to IMP