Regulations chapter 2 Flashcards
(130 cards)
- According to CLIA and CAP regulations,
which one of the following individuals is
considered to be a director of a clinical molecular
laboratory?
A. Dr. A, a member of the corresponding
academic society
B. Dr. B, appointed by the institute as the
director laboratory
C. Dr. C, board certified in the corresponding
specialty
D. Dr. D, listed on the laboratory’s CAP and
CLIA certificate as the lab director
E. All of the above
F. None of the above
D. Dr. D, listed on the laboratory’s CAP and
CLIA certificate as the lab director
- A scientist plans to develop a Sanger
sequencingbased test for the FAS (TNFRSF6)
gene to assist diagnosis of autoimmune
lymphoproliferative syndrome in a clinical
molecular laboratory. There are no commercially
available FDA-cleared/approved assays for it.
According to the Clinical Laboratory
Improvement Amendments (CLIA) regulations,which one of the following descriptions most
appropriately describes this test?
A. Waived test
B. Nonwaived test
C. Moderate-complexity test
D. High-complexity test
E. None of the above
D. The laboratory-developed Sanger sequencing
assay for the FAS gene is a high-complexity test
system.
- A scientist plans to develop a quantitative
PCRbased test for pathogenic variants in the
NPM1 gene to assist in the diagnosis of acute
myeloid leukemia (AML) in a clinical molecular
laboratory. There are no commercially available
FDA-cleared/approved assays for it. According to
the Clinical Laboratory Improvement
Amendments (CLIA) program, which one of the
following descriptions most appropriately
describes this test?
A. Waived test
B. Nonwaived test
C. Moderate-complexity test
D. High-complexity test
E. None of the above
D. The laboratory-developed quantitative PCR
assay for the NPM1 gene is a high-complexity test
system.
- A scientist plans to validate a quantitative HIV-1
RNA assay for viral load assessment with the
Bayer VERSANT HIV-1 RNA 3.0 Assay (bDNA), a
FDA-approved commercially available assay, in a
clinical molecular laboratory. According to the
Clinical Laboratory Improvement Amendments
(CLIA) program, which one of the following
descriptions most appropriately describes this test?
A. Waived test
B. Nonwaived test
C. Moderate-complexity test
D. High-complexity test
E. None of the above
D. HIV-1 RNA quantitative PCR assay is a highcomplexity
test system.
- A scientist developed a quantitative PCR-based
test for pathogenic variants in the NPM1 gene to
assist in the diagnosis of acute myeloid leukemia
(AML) in a clinical molecular laboratory. He used
the data published in a peer-reviewed article,
since there were no commercially available FDAcleared/
approved assays for it. The validation
was done as planned, and the summary was
written. Who has the authority to review and
approve the validation, according to the College
of American Pathologist (CAP)’s regulations, if
applicable?
A. Clinical Laboratory Improvement
Amendments (CLIA)
B. College of American Pathologist (CAP)
C. The chair of the department
D. The laboratory director
E. The supervisor of the laboratory
F. All of the above
G. None of the above
D. According to the College of American
Pathology (CAP) All Common Checklist dated
July 28, 2015, COM.40000, “There is a summary
statement, signed by the laboratory director (or
designee who meets CAP director qualifications) prior
to use in patient testing, that includes the
A scientist planned to validate the bioMe´rieux
THxID BRAF assay, an FDA-approved
commercially available assay, to detect
somatic mutations in order to guide the
therapy of metastatic melanoma in a clinical
molecular laboratory. The protocol received
from bioMe´rieux was for 20-μL total volume for
each reaction. To save money, the scientist
decided to use 10 μL for each reaction. Which
validation stringency should he follow for the
validation, according to the College of
American Pathologist (CAP)’s regulations, if
applicable?
A. Follow the validation procedure for FDAapproved
assay.
B. Follow the validation procedure for FDAapproved
assay, and add analytical sensitivity
and specificity.
C. Follow the validation procedure for FDAapproved
assay with both 20-μL and 10-μL
reactions.
D. Follow the validation procedure for a
laboratory-developed assay.
E. None of the above.
D. Follow the validation procedure for a
laboratory-developed assay.“If an FDA-cleared/
approved test is modified to meet the needs of the user or
if the test is developed by the laboratory (LDT), both
analytical and clinical performance parameters need to
be established.
A scientist reviewed last month’s data in a
clinical molecular laboratory and found that the
failure rate of the KRAS test was 10% higher
than that for the previous 6 months and for the
same month last year. Which one of the
following is the most appropriate term used to
define the nature of this monthly review of
failure rate, according to the College of
American Pathologist (CAP)’s regulations, if
applicable?
A. Quality assurance
B. Quality control
C. Quality improvement
D. Quality planning
E. All of the above
F. None of the above
A. Quality assurance (QA) is a way of preventing
mistakes or defects in the process of testing clinical
samples and avoiding problems when delivering the
results to customers, which is the part of quality
management focused on providing confidence that
quality requirements will be fulfilled.
A scientist reviewed last month’s quality control
data in a clinical molecular laboratory and
found that the failure rate of the KRAS test was
10% higher than that for the previous 6 months
and for the same month last year. Which one of
following actions should he take to resolve the
problem, according to the College of
American Pathologist (CAP)’s regulations, if
applicable?
A. Quality assurance
B. Quality control
C. Quality improvement
D. Quality planning
E. All of the above
F. None of the above
C. Quality improvement (QI) is a formal approach
to the analysis of performance and systematic
efforts to improve it. This question is a good
example. The initial finding was the high failure
rate based on the data gathered through the
quality assurance program. Further investigation
found that the reaction volume at the end of
procedure became very low (from 20 μL to 5 μL).
So the laboratory worked on two plans to solve
the problem. This troubleshooting process is
called quality improvement (QI).
A clinical molecular genetic scientist has been
working in a start-up company for 2 months. He
has been purchasing reagents and writing policies
and procedures for this new laboratory. Which
one of the following should be included in his
quality management plan for the clinical
laboratory, according to the College of American
Pathologist (CAP)’s regulations, if applicable?
A. Calibrating the pipette at least once a year
B. Checking the quality of new lots and new
shipments of reagents against old ones
C. Having a written quality management plan
D. Maintaining discontinued procedures for at
least 2 years
E. Participating in the CAP Proficiency Test (PT)
F. All of the above
G. None of the above
F. All of the above
A courier picked up a peripheral-blood sample
(lavender) from an outreach draw station for
BCR-ABL1 quantitative testing at the main
hospital. He checked the identifiers of the sample
on the requisition form and the tube to make sure
the identity of the sample matched. At a
minimum, how many identifiers have to be on
the tube for a collected peripheral-blood sample,
according to the College of American Pathologist
(CAP)’s regulations, if applicable?
A. At least one
B. At least two
C. At least three
D. At least four
E. None of above
B. According to the College of American
Pathology (CAP) Laboratory General Checklist
dated July 28, 2015, GEN.4049, “All primary
specimen containers are labeled with at least two
patient-specific identifiers.” And according to the
CAP All Common Checklist dated July 28, 2015,
COM.06100, “All primary specimen containers
are labeled with at least two patient-specific
identifiers.”
Therefore, at least 2 identifiers have to be on
the tube for a collected peripheral blood sample
according to the College of American Pathologist
(CAP)’s regulation.
A courier picked up a peripheral-blood sample
(lavender) from a local obstetrician/gynecologist
(Ob/Gyn) practice for cystic fibrosis testing in the
main hospital. He noticed the patient’s name was
donor BJ. And the only usable identifier on the
requisition form and the tube was patient’s
medical record number. Which type of deficiency
would an on-site College of American Pathologist
(CAP) inspector find it to be, according to the
College of American Pathologist (CAP)’s
regulations, if applicable?
A. Phase 0
B. Phase I
C. Phase II
D. Phase III
E. None of above
E. This is not a deficiency. According to the College
of American Pathologists (CAP) All Common
Checklist dated July 28, 2015, COM.06100, “All
primary specimen containers are labeled with at
least two patient-specific identifiers.” However, it
also states “In limited situations, a single
identifier may be used if it can uniquely identify
the specimen.
A scientist just finished validation of a HER2
FISH assay with archived formalin-fixed,
paraffin-embedded (FFPE) tissue samples in a
clinical molecular laboratory at a hospital.
According to procedure, he sends samples to the
cytology laboratory in the same hospital for
hybridization, then takes the slides back for analysis. How should the clinical molecular
laboratory perform proficiency test on this HER2
FISH assay, according to the College of American
Pathologist (CAP)’s regulations, if applicable?1
A. Enroll in the College of American Pathologist
(CAP) HER2 immunohistochemistry (IHC)
proficiency test.
B. Enroll in the College of American Pathologist
(CAP) HER2 FISH proficiency test.
C. Perform an alternative HER2 FISH proficiency
test.
D. All of the above.
E. None of the above.
C. According to the College of American
Pathologists (CAP) All Common Checklist dated
July 28, 2015, COM.01300, “Proficiency testing
for HER2 (ERBB2) is method specific. If the
laboratory performs HER2 (ERBB2) testing by
multiple methods, the laboratory must
participate in PT for each method. . . If the
laboratory sends its FISH (or ISH) slides for
hybridization to another facility, the laboratory
must perform an alternative assessment of the test
twice annually and may not participate in formal
(external) PT.”
A scientist in a clinical molecular laboratory of a
hospital just finished validation of a HER2 FISH
assay with archived formalin-fixed, paraffinembedded
(FFPE) tissue samples. According to
procedure, she sends samples to the cytology
laboratory in the same hospital for hybridization,
then takes the slides back for analysis. Therefore,
the clinical molecular laboratory must perform an
alternative assessment of the HER2 FISH assay
instead of the CAP formal proficiency test. At a
minimum, how frequently should the laboratory
perform the alternative assessment of the HER2
FISH assay, according to the College of American
Pathologist (CAP)’s regulations, if applicable?
A. Every quarter
B. Semiannually
C. Annually
D. Biennially
E. None of the above
B. According to the College of American
Pathologists (CAP) All Common Checklist dated
July 28, 2015, COM.01300, “Proficiency testing for
HER2 (ERBB2) is method specific. If the
laboratory performs HER2 (ERBB2) testing by
multiple methods, the laboratory must participate
in PT for each method. . . If the laboratory sends
its FISH (or ISH) slides for hybridization to
another facility, the laboratory must perform an
alternative assessment of the test twice annually
and may not participate in formal (external) PT.”
A clinical molecular laboratory in a hospital
received specimens for proficiency test of a BRAF
assay from the College of American Pathologist
(CAP) last week. The specimens were treated as
regular clinical samples, and were signed out in
the electronic reporting system in the laboratory.
Who should sign the Proficiency Test (PT)
Attestation Statement according to the College of
American Pathologist (CAP)’s regulations, if
applicable?
a. The laboratory director or designee
b. All individuals involved in the testing process
c. All staff in this laboratory
d. The quality control office of the hospital
A. a, b, and d
B. a, c, and d
C. a and b
D. a and c
E. a, b, c, and d
C. The laboratory director or designee
and all individuals involved in the testing process
should sign the Proficiency Test (PT) Attestation
Statement according to CAP’s regulation.
A clinical molecular laboratory in a hospital
received specimens for a proficiency test of a
BRAF assay from the College of American
Pathologist (CAP) last week, which was 3 months after test was launched. The specimens were
treated as regular clinical samples and were
signed out in the electronic reporting system in
the laboratory. At a minimum, how frequently
should proficiency tests (PT) of this assay be done
according to the Clinical Laboratory Improvement
Amendments (CLIAs) 1988?
A. Annually
B. Biennially
C. Twice a year
D. Three times a year
E. None of above
C. According to the College of American
Pathology (CAP) All Common Checklist dated
July 28, 2015, COM.01500, “For test for which
CAP does not require PT, the laboratory at least
semi-annually exercises an alternative performance
assessment system for
A director of a CAP/CLIA-certified clinical
molecular laboratory received specimens for a
proficiency test (PT) of a BRAF assay from the
College of American Pathologist (CAP). One of
the samples showed unacceptable results. Which
type of deficiency would this discrepancy be,
according to the College of American Pathologist
(CAP)’s regulations, if applicable?
A. Phase 0
B. Phase I
C. Phase II
D. Phase III
E. None of above
E. This is not a deficiency according to the College
of American Pathologist (CAP)’s regulations.
However, the laboratory must have written
procedures for the proper handling, analysis,
review, and reporting of proficiency testing
materials.
A CAP inspection team comes to the molecular
pathology laboratory in the department of
pathology of a hospital for an on-site inspection.
The team member for the molecular laboratory
finds that the CYP2C19 test is on the test menu of
the laboratory, but not on the current College of
American Pathologist (CAP) activity menu. The
director explains that the test was developed 6
months ago, and he has not had a chance to add
it to the CAP activity menu. Which type of
deficiency would this discrepancy be, according
to the College of American Pathologist (CAP)’s
regulations, if applicable?
A. Phase 0
B. Phase I
C. Phase II
D. Phase III
E. None of above
B. This is a Phase I deficiency according to the
College of American Pathologist (CAP)’s
regulations. In the College of American Pathology
(CAP) All Common Checklist dated July 28, 2015,
COM.01200, it states “The laboratory’s current
CAP Activity Menu accurately reflects the testing
performed.” If the laboratory failed to inform
CAP the change of the test menu, it would be a
phase I deficiency. In the situation described in
the question, “the inspector should contact the
CAP (800-323-4040) for instructions and record on
the appropriate section page in the Inspector’s
Summation Report (ISR) whether those tests were
inspected or not inspected.”
A clinical molecular scientist reviewed last
month’s quality control data in the laboratory,
and found that the detection rate of the KRAS test
was 50% lower than it had been in the previous 6
months and in the same month last year. He
started to investigate the reason while sending the
samples to a reference laboratory. During
investigation, the laboratory received CAP
proficiency test (PT) specimens for this test. One
of the ideas was to send the specimens to the
reference laboratory as clinical samples. Which
type of deficiency would it be if the laboratory sent the CAP specimens to a reference laboratory,
according to the College of American Pathologist
(CAP)’s regulations, if applicable?
A. Phase 0
B. Phase I
C. Phase II
D. Phase III
E. None of above
C. Under CLIA’88 regulations, there is a strict
prohibition against referring proficiency testing
(PT) specimens to another laboratory with a
different CLIA number, even if the second
laboratory is in the same health care system. If a
laboratory refers College of American Pathology
(CAP) PT specimens to another laboratory in any
circumstances, it is a Phase II deficiency.
A clinical molecular laboratory in a hospital
received specimens for proficiency test (PT) of a
BRAF assay from the College of American
Pathologist (CAP) last week, which was 3 months
after test was launched. The specimens were
treated as regular clinical samples and were
signed out in the electronic reporting system in
the laboratory. How long should the primary
records of the proficiency test (PT) be retained,
according to the Clinical Laboratory Improvement
Amendments (CLIA) 1988?
A. At least 1 year
B. At least 2 years
C. At least 3 years
D. At least 4 years
E. At least 5 years
F. At least 10 years
B. According to the College of American
Pathology (CAP) All Common Checklist dated
April 21, 2014, COM.01700, “Primary records
related to PT and alternative assessment testing
are retained for two years (unless a longer
retention period is required elsewhere in this
checklist for specific analytes or disciplines).
These include all instrument tapes, work cards,
computer printouts, evaluation reports, evidence
of review, and documentation of follow-up/
corrective action.”
A start-up clinical molecular genetics laboratory
in the state of Arizona welcomed its first on-site
inspector on a Monday morning. There were only
two tests in this laboratory—factor V Leiden and
factor II. The director shared with the inspector
that he used an alternative approach for the
proficiency test (PT) in order to save money.
Which type of deficiency would it be, according
to the College of American Pathologist (CAP)’s
regulations, if applicable?
A. Phase 0
B. Phase I
C. Phase II
D. Phase III
E. None of above
C. This is a Phase II deficiency according to the
College of American Pathologist (CAP)’s
regulations. According to the CAP All Common
Checklist dated July 28, 2015, COM.01300, “The
laboratory participates in the appropriate
required proficiency testing (PT)/external
quality assessment (EQA) program accepted by
CAP for the patient testing performed.”
A start-up clinical molecular genetics laboratory
in the state of Arizona welcomed its first on-site
inspector on a Monday morning. There were only
two tests in this laboratory—BRAF and EGFR.
The director shared with the inspector that he
used an alternative approach for the proficiency
test (PT) in order to save money. Which type of
deficiency would it be, according to the College of
American Pathologist (CAP)’s regulations, if
applicable?
A. Phase 0
B. Phase I
C. Phase II
D. Phase III
E. None of above
E. This is not a deficiency according to the College
of American Pathologist (CAP)’s , “For tests for which CAP does not
require PT, the laboratory at least semi-annually
exercises an alternative performance assessment
system for determining the reliability of analytic
testing.”
BRAF and EGFR molecular assays fall into this
category, which requires alternative assessment.
According to COM.01500, “Appropriate
alternative performance assessment procedures
include participation in an external PT program
not required by CAP;
According to the Centers for Disease Control and
Prevention (CDC) classification of biohazardous
waste, the risk group 1 agents are:
A. Agents that are not associated with disease in
healthy adult humans.
B. Agents that are associated with serious or
lethal human disease for which preventive or
therapeutic interventions may be available
(high individual risk but low community risk).
C. Agents that are associated with human disease
that is rarely serious and for which preventive
or therapeutic interventions are often available.
D. Agents that are likely to cause serious or lethal
human disease for which preventive or
therapeutic interventions are not usually
available (high individual risk and high
community risk).
A. In a research laboratory, this would include
solid waste generated from any work with human
or nonhuman primate blood, tissue, or cells and
microbiological agents that may cause human
illness. The Basis for the Classification of
Biohazardous Agents by Risk Group (RG) is as
follows:
* Risk Group 1 (RG1): Agents that are not associated
with disease in healthy adult humans.
According to the Centers for Disease Control and
Prevention (CDC) classification of biohazardous
waste, the Risk Group 4 agents are:
A. Agents that are not associated with disease in
healthy adult humans.
B. Agents that are associated with serious or
lethal human disease for which preventive or
therapeutic interventions may be available
(high individual risk but low community risk).
C. Agents that are associated with human disease
that is rarely serious and for which preventive
or therapeutic interventions are often available.
D. Agents that are likely to cause serious or lethal
human disease for which preventive or
therapeutic interventions are not usually
available (high individual risk and high
community risk).
D. In a research laboratory, this would include
solid waste generated from any work with human
or nonhuman primate blood, tissue, or cells and
microbiological agents that may cause human
illness. The Basis for the Classification of
Biohazardous Agents by Risk Group (RG) is as
follows:
* Risk Group 4 (RG4): Agents that are likely to cause
serious or lethal human disease for which preventive
or therapeutic interventions are not usually
available (high individual risk and high community
risk)
According to the Centers for Disease Control and
Prevention (CDC) classification of biohazardous
waste, the Risk Group 2 agents are:
A. Agents that are not associated with disease in
healthy adult humans.
B. Agents that are associated with serious or
lethal human disease for which preventive or
therapeutic interventions may be available
(high individual risk but low community risk).
C. Agents that are associated with human
disease that is rarely serious and for which
preventive or therapeutic interventions are
often available
D. Agents that are likely to cause serious or lethal
human disease for which preventive or
therapeutic interventions are not usually
available (high individual risk and high
community risk).
B. In a research laboratory, this would include
solid waste generated from any work with human
or nonhuman primate blood, tissue, or cells and
microbiological agents that may cause human
illness. The Basis for the Classification of
Biohazardous Agents by Risk Group (RG) is as
follows:
* Risk Group 2 (RG2): Agents that are associated
with human disease that is rarely serious and for
which preventive or therapeutic interventions are
often available.