Review of the innate Immune system Flashcards

1
Q

Why do we need the innate system when we have the adaptive immune response for an infection?

A
  • Adaptive Immune Response (antibodies + T cells) are too slow to protect us from some new pathogens
  • Especially for infections which have a high replication rate
  • So innate provides first line of defence to keep infection under control until antibodies and T cells kick in
  • Resolution of infection requires both adaptive and innate immune responses
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2
Q

State the key difference between adaptive and innate immunity?

A
  • Adaptive immunity - involves very specific recognition of a particular infectious agent (usually sees a protein = antigen)
  • Innate immunity - no specific antigen recognition + involves recognition of broadly conserved features of different classes of pathogens (PAMPS)
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3
Q

Pattern recognition of pathogens
What molecules does pattern recognition of pathogens occur by and describe it?

A
  • Pattern recognition is through Pathogen-associated Molecular Patterns (PAMPs)
  • Molecules present only on pathogens and not on host cells
  • Essential for survival of pathogens
  • Invariant structures shared by entire class of pathogens
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4
Q

State examples of PAMPs for G -ve, G+ve, bacteria, and viruses?

A
  • Gram-negative bacteria; lipopolysaccharides (LPSs) found in outer membrane
  • Gram-positive bacteria; teichoic acid, lipoteichoic acid, peptidoglycan found in outer membrane
  • Bacterial flagellin
  • Abnormal protein glycosylation
  • Abnormal nucleic acids - viruses
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5
Q

What are pattern recognition receptors (PRs)?

A
  • Host factors that specifically recognise a particular type of PAMP
  • They are germ-line encoded: These receptors evolved to recognize conserved products of microbial metabolism produced by microbial pathogens,
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6
Q

State the 3 functional classes of PR’s

A
  • Extracellular: They recognise PAMPs outside of a cell and trigger a coordinated response to the pathogen •
  • Intracellular (cytoplasmic): They recognise PAMPs inside a cell and act to co-ordinate a response to the pathogen
  • Secreted: They act to tag circulating pathogens for elimination
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7
Q

Components of the innate system
State the 5 key components of innate immunity?

A
  • The inflammatory response
  • Phagocytes: Monocytes/granulocytes/neutrophils
  • Complement
  • Cytokines, chemokines and anti-microbial peptides (AMPs)
  • Natural Killer cells
  • They’re all related as they all trigger each other
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8
Q

Describe the inflammatory response and it’s effects

A
  • A generic defence mechanism whose purpose is to localize and eliminate injurious agents and to remove damaged tissue components
  • Effects:
  • Enhanced permeability and extravasation: Permeability, so cells can get to site of infection. Extravasation = cells from blood to tissue
  • Neutrophil recruitment
  • Enhanced cell adhesion
  • Enhance clotting
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9
Q

How is the inflammatory response triggered?

A

Triggered by the release of pro-inflammatory cytokines and chemokines at the site of infection

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10
Q

How do phagocytes distingiush between recognising what to target and how to know when they are infected?

A
  • Phagocytes have to be able to recognise what to eat, but they need know to as well when they are infected in order to produce cytokines and chemokines
  • The molecular recognition events are distinct: i.e. they use different pattern recognition receptors (PRRs)
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11
Q

State the type of phagocytes that can carry out phagocytosis in multicellular animals?

A
  • Dendritic cells, macrophages and neutrophils
  • Considered as professional phagocytes
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12
Q

State the 3 distinct roles of macrophages and dendritic cells in immunity

A
  • Phagocytosis; material is destroyed in lysosomes •
  • Infections can trigger macrophage activation - activated macrophages produce cytokines and chemokines to stimulate both innate and adaptive immune responses - this triggers the inflammatory response and can promote a local anti-microbial state
  • Peptides from broken down pathogens can be presented through MHC and promote the development or recall of an adaptive T cell response (more for D cell)
  • The major histocompatibility complex (MHC) is a series of genes that code for cell surface proteins which control the adaptive immune response
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13
Q

State 5 ways pathogens use recognition for phagocytes to eat?

A
  1. By detecting phosphatidylserine on exterior membrane surface (cells undergoing apoptosis
  2. By detecting “atypical sugars” (e.g. mannose, fucose, beta-glucan) on cell surfaces
  3. By Scavenger receptors -> receptors that are non-self
  4. By “passive sampling”
  5. By detecting complement proteins bound to the pathogen surface
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14
Q

Describe what the complement system is used for

A
  • Originally described as a heat-sensitive component of serum that could augment the ability of antibodies to inactivate antigen.
  • Originally thought to be a biochemically complex antibody-dependent effector mechanism leading to:
  • Opsonisation
  • Recruitment of phagocytic cells, vasoactive function
  • Punches holes in target membranes (MAC)
  • there are all an effector mechanism used as a vital part of innate system
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15
Q

Describe the role of complement proteins?

A

Complement proteins act as secreted Pattern recognition receptors (PRRs) and can be activated by a range of PAMPs, and can also be activated by “altered self”

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16
Q

Draw the complement system outlining the pathways, PRs and PAMPs?

A

VD

17
Q

State the 3 types of PRRs describing the PAMPs recognised and the outcome of the receptor?

A
  • Receptor: Toll like receptors (surface and endosomal) - Ligand: LPS, lipoproteins, Flagellin - Outcome: Inflammation: Cytokine release, enhanced killing like reactive oxygen species
  • Receptor: NOD like receptors - Ligand: Peptidoglycan from G+ and G- bacteria, some viral DNA/RNA - Outcome: Inflammation cytokine release
  • Receptor: RIG like receptors - Ligand: Viral dsRNA and 5’ triphospho RNA - Outcome: Type 1 interferon production
18
Q

Describe the difference between cytokines and chemokines?

A
  • Glycoprotein hormones that affect the immune response
  • Cytokines: Act to modify the behaviour of cells in the immune response. Most of these are called interleukins (eg. IL-1) - upregulate IF response
  • Chemokines: Act as chemotactic factors - i.e. they create concentration gradients which attract (or occasionally repel) specific cell types to a site of production infection
19
Q

Interferons
Describe interferons and state its features?

A
  • Interferons; the main anti-viral cytokines
  • Secreted factors (type I and type III): Type Il is for lungs
  • Induced by viral infection
  • Offer cross-protection
  • Widely distributed in evolution, from fish upwards, but species-specific
20
Q

Describe the interferon system?

A

VD

21
Q

What enzyme can lead to transcriptional arrest from interferons?

A

viral dsRNA -> PKRa -> transcriptional arrest

22
Q

What are anti-microbial peptides and how they do work?

A
  • Anti-microbial peptides (AMPs) (e.g. Defensins)
  • Secreted short peptides (18-45 amino acids)
  • Usually work by disrupting cell wall leading to lysis
  • Some are induced by bacterial infection
  • Offer broad protection
23
Q

Describe what natural killer cells are and their function?

A
  • Natural Killer (NK) cells (Large granular lymphocytes)
  • 4% white blood cells
  • Lymphocyte-like but larger with granular cytoplasm
  • Kill certain tumour & virally infected cells
  • Target cell destruction is caused by cytotoxic molecules called granzymes & perforins
24
Q

Describe the activation of NK cells?

A
  • NK cells possess the ability to recognise and lyse virally infected cells and certain tumour cells.
  • Selectivity is conferred by LOSS of “self” MHC molecules on target cell surfaces, AND up-regulation of activating ligands.
25
Q

Explain the activation of natural killer cells

A
  • All Uninfected cells have MHC class I on their surface -> These present peptides which trigger cytoxic T cell attack
  • NK cells have MH receptors which if they detect MHC class I on cell, won’t attack as its ‘self’
  • So infected cells remove MHC class to prevent Tc attack
  • But NK cells detect no MHC class and therefore induce cell death via: Perforin + cytotoxic granules or Engagement of death receptors
26
Q

State inherited defects and the diseases that arise from the complement, macrophage, cytokines and interferons? (PART 1)

A
  • Complement: Core defects (e.g. C3) linked to development of autoimmune diseases such as lupus. Non-core defects linked to suseptibility to specific types of pathogens such as Neisseria
  • Macrophage deficiencies: Chronic granulomatous disease (CGD); No oxidative burst for bacterial killing. IRF8 mutations linked to susceptibility to TB
27
Q

State inherited defects and the diseases that arise from the complement, macrophage, cytokines and interferons? (PART 2)

A
  • Aicardi-Goutières syndrome associated with constitutive production of inflammatory cytokines
  • Lack of interferon-responsiveness - sensitivity to viral infection (e.g. measles)
28
Q

Compare the innate immunity with adaptive immunity in terms of cell types, speed, memory, specificity, receptors

A
  • Innate immunity:
  • Cell types: Macrophages, Neutrophils, DCs
  • Speed: Fast
  • Memory: No
  • Specificity: Low
  • Receptors: Pattern recognition
  • Strategy of recognition: Small number of microbial ligands that are highly conserved between pathogens; germ-line encoded receptors evolved by natural selection
29
Q

Compare the innate immunity with adaptive immunity in terms of cell types, speed, memory, specificity, receptors

A
  • Adaptive immunity:
  • Cell types: Lymphocytes
  • Speed: Slow
  • Memory: Yes
  • Specificity: High
  • Receptors: Ig, TCR
  • Strategy of recognition: Billions of possible antigens. Receptors generated randomly within individual; can’t be inherited