Specimen collection - media Flashcards

(36 cards)

1
Q

Urine cultures media used and info

A
  • CLED (cysteine lactose electrolyte deficient agar) cysteine allows for growht of coliforms, electrolyte deficiency prevents swarming of proteus and lactose fermentation helps in identification. Incubated at 35-37 for 24 hours.

Other plates used include MacConkey without salt, chromogenic agar

Other more precious samples are also cultured on 1 MacConkey plate incubated in air, on 1 blood agar also in air and another blood agar anaerobically.

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2
Q

Stool sample media

A
  • Deoxycholate Lactose Sucrose agar for salmonella and shigella
  • Salmonella chromogenic agar
  • Selenite broth for salmonella
  • Preston broth for Campylobacter
  • Campylobacter slective agar (microaerophilic incubation at 43 degrees)
  • Sorbitol MacConkey agar for E.coli 0157.

To check for cholera : Alakline peptone water APW and TCBS (thiosulfate citrate bile salts sucrose agar). Yellow colonies on TCBS

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3
Q

what transport medium can stool samples be given in

A

Cary Blair’s transport medium

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4
Q

When shoudl stool samples NOT be given in transport medium

A

When testing for GIT parasites

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5
Q

CSF storage if it cannot be processed immediately

A

incubated at 37 degrees

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6
Q

Culture media for CSF

A

blood agar, chocolate agar (for neisseria and H. influenzae), MacConkey and CTA agar base

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7
Q

CSF in bacterial meningitis

A
  • turbid
  • not sterile, bacteria idetnfied from gram stain and culture
  • 50-20,000 polymoprhs
  • markedly raised protein
  • reduced or absent glucose
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8
Q

CSF in viral meningitis

A
  • clear or slightly turbid
  • 10-500 lymphocytes
  • viruses rarely isolated, normally isolated from stools if enterovirsues or by serology for mumps
  • protein is normal or slighlty riased
  • glucose is normal
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9
Q

CSF in tuberculous meningitis

A
  • clear or slightly turbid
  • 10-500 lymphocytes
  • Mycobacterium tuberculosis with ZN stain and growth on Lowenstein Jensen medium
  • protein is moderately raised
  • gluocse is normally reduced
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10
Q

Processing of CSF

A
  • centrifuge
  • remove supernatant (can be used to carry out rapid antigen screen)
  • deposit is inoculated on BA, CBA, MacConkey. Incubated for 24 hours in 507% CO2
  • slides are prepared for GS, ZN and MB
  • subculturing carried out on CTA ( cysteine tryptic agar) which acts as an enrichment medium.
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11
Q

What bacteria are tested for in rapid antigen screen for CSF

A
  • streptococcus pneumonia
  • strep agalactiae
  • haemophilus influenzae type b
  • neisseria meningitidis A,B,C,Y, W135
  • E coli K1
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12
Q

what crytococcus species are tested for in crytpococcus anitgen rapid test for CSF

A

cryptococcus neoformans and c. gattii

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13
Q

Culture media for sputum samples

A
  • blood agar (anaerobic) for Staph aureus and streps
  • Bacitracin choco agar (5-7% CO2) Haemophilus influenzae and Moraxella catarrhalis
  • MacConkey (in air ) for enterobacterales, pseudomonas etc

For cystic fibrosis: Burkholderia cepacia selective agar

For MRSA: oxacillin resistance screening agar

Sabouraud for mycology, candida

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14
Q

Culture media for wound cultures

A

blood agar (1 anaerobic and 1 5-7% CO2), media for anaerobes, MacConkey

Cooked meat medium for anaerobes (Clostridium)

Oxacillin resistance screening agar for MRSA

Sabouraud for yeatss

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15
Q

Commonly isolated pathogens of sputum

A

Staph aureus
Strep pneumonia
Strp pyogenes
enterobacterles
acinetobacter
pseudomonas
H influenzae
Burkholderia cepacia in cystic fibrosis

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16
Q

Commonly isoltaed pathogens of wound cultures

A

anaerobes (actinomyces, becteroides, clostridium)
staph aureus
strep pyogenes
enterobacterales(klebsiella,serratia, E,coli)
pseudomonas
acinetobacter

17
Q

Culture media for aspirates

A
  • blood agar 5-7% CO2
  • blood agar anaerobic
  • MacConkey agar for Enterobacterales
  • cooked meat medium
  • Castaneda broth; tryptone soya broth and colombia agar base

ORSA and sabouraud for MRSA and yeasts

18
Q

Throat swab cultures

A

blood agar (anaerobic) for lancefield groups A,C and G
- Bacitracin chocolate agar for h. influenzae type b

  • ORSA for MRSA
  • Sabouraud for yeasts in diabetic and immunocompromised people
  • TMSA (Thayer martin modified medium) for gonorrrhoeae
19
Q

commonly isolated pathogens in throat swabs

A
  • group a streps (pyogenes)
    group C group G streps
  • H influenzae
  • Neisseria gonorrhae (STI)
20
Q

Culture media for genital tract samples

A

high vaginal swabs - blood agar at 5-7% CO2, sabouraud agar.

Urethral swabs and cervical swabs - blood agar, sabouraud and thayer martin modified medium for gonorrhoea

  • Trichomonas vaginalis selective medium
  • blood agar (anaerobic) for anaerobes
  • MacConkey for enterobacterales and pseudomonads
  • Haemophilus ducreyi selective agar for chancroids
  • ## listeria selective agar for listeriosis
21
Q

bacterial vaginosis signs symptoms and more

A
  • heavy discharge, thin, white to grey in colour
  • foul odour after intercourse
  • amine odour present
  • increase in pH
  • presence of clue cells, few lactobacilli and wbc
22
Q

lactobacillosis

A
  • pruritis (itching)
  • vulvar dysuria
  • variable discharge which is thick white and curdy
  • possible slightly higher pH
  • many lactobacilli in chains
23
Q

cytolytic vaginosis

A
  • pruritis (itching)
  • dyspareunia (painful intercourse)
  • vulvar dysuria
  • increase in luteal phase of menstrual cycle
  • discharge; thick or thin, white, creamy or curdy
  • few wbc
  • large number of lactobacilli
  • desquamated epithelial cells
24
Q

selective culture media for Gardnerella vaginalis

A

Human Blood polysorbate 80 - polysorbate 80 enhances the diffusion of beta haemolysis
- Colistin - Oxalinic Acid Blood agar (COBA

25
criteria used for bacterial vaginosis
Hay's criteria Class I - normal, predom lactobacilli Class II - intermediate; lactobacilli and other morphotypes Class III - few or absent lactobacilli, presence of gardnerella vaginalis or other morphotypes, possible BV Other is Nugent's criteria
26
media for balanitis and balanoposthitis
Blood agar anaerboic, sabouraud and mannitol salt agar for staph aureus vs coagulase -ve staphs
27
Culture medias used for anaerobic bacteria
- Wilkins Chalgren medium (anaerobes) - Wilkins Chalgren + Nalixidic Acid Tween 80 (non sporing anaerobes eg. Actinomyces, Prevotella, Peptostreptococci) - Wilkins Chalgren +Nalidixic Acid Vanvomycin agar (gram - anaerobes eg Bacteroides, Fusobacterium) - horse blood agar - Brucella agar (with haemin and vit K) - Neomycin BA (Clostridia and fastiduous anaerobes) - Thioglycollate broth (enrichment for anaerobics) - Cooked meat medium (differentiate anaerobes by saccharylotic and proteolytic)
28
anaerobic incubation
anaerobic jar with gas generating sachet of CO2 nad H2 or anaerobic chamber with 5% COw2, 10% H, 85% N
29
which bacteria are mentioned in Nugen't criteria for bacterial vaginosis
Lactobacillus Prevotella Gardnerella vaginalis Mobiluncus
30
incubation info for candida chromogenic agar
48 hours in 30 degrees
31
incubation info for sabouraud dextrose agar
incubate at 28 degrees for 21 days or until growth is observed.
32
media to use for bacilllus anthracis
blood agar chocolate agr nutrient broths (CMM; NB 2) bicarbonate media do not grwo on MacConkey Specifc culture mdia PLET incubation 24 hrs 35 degrees in air or 5% CO2
33
specific culture media for selective bacillus anthracis
PLET (polymyxin lysozyme EDTA thallous acetate This inhibits bacillus cereus
34
culture media for corynebacteria
- blood tellurite agar - loeffler agar -cystine tellurite agar 37 degrees 5%CO2 black/brown colonies with brwon halo on tellurite mediua
35
Media used for diagnosis of salmonella
- blood agar mac conkey agar 3 - salmonella non lactose fermenters - DCLS for gram negative enteric bacilli, seen as colourless to pink colonies urease agar slants with triple sugar iron agar - selenite broth highly selective - salmonella chromogenic agar
36