Structure Of Nucleotide And Nucleotide Metabolsim Flashcards

(48 cards)

1
Q

Nitrogen bases present in both DNA and RNA

A

Adenine
Guanine
Cytosine

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2
Q

Nitrogen bases present in
DNA only

A

Thymine

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3
Q

Nitrogen base present in RNA
only

A

Uracil

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4
Q

Methylation of uracil makes this nitrogen base

A

Thymine

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5
Q

This is the bond formed between nitrogenous base and pentose sugar of a nucleoside

A

N-glycosidic linkage

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6
Q

This is the bond formed between pentose sugar and phosphoryl group of a nucleotide

A

Ester bond

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7
Q

This bond allows the addition of more phosphoryl bonds at nucleotides to form di- and triphosphates

A

Anhydride bond

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8
Q

Most abundant free nucleotide in mammalian cell

A

Adenosine triphosphate
(ATP)

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9
Q

Nucleic acids are polymers of nucleotides that are joined by this bond

A

3’-5’ phosphodiester bond

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10
Q

Sequence of writing the bases of a DNA

A

From 5’ end → 3’ end

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11
Q

Determinant of the melting point of DNA

A

Number of G-C bonds

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12
Q

Orientation of DNA strands

A

Antiparallel

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13
Q

States that the number of
purines = number of
pyrimidines

A

Chargaffs rule

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14
Q

All types of DNA are right-handed except this type of
DNA

A

Z-DNA (left-handed)

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15
Q

Most common form of DNA physiologically (well-hydrated and w/ low salt concentration)

A

B-DNA

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16
Q

Type of DNA found in low humidity and high salt concentration

A

A-DNA

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17
Q

Type of DNA mostly seen in 5’ end of chromosomes

A

Z-DNA

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18
Q

Most abundant chromatin protein

A

Histone

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19
Q

Histone seen in the linker region

A

H1

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20
Q

Composition of the histone octomer (core histones)

A

Pairs of HzA, H2B, H3, H4

21
Q

Source of negative charge of
DNA

A

Phosphate groups

22
Q

Source of positive charge of histones

A

Lysine (H3, H4)
Arginine (H2A, H2B)

23
Q

Represents the “beads on a string” appearance on electron microscopy

A

10-nm chromatin fibril

24
Q

DNA is wrapped by around the histone octomer by this amount

25
Condensation of DNA to form chromosomes occur during this phase of mitosis
Prophase
26
The highly condensed chromatin seen in electron microscopy, which is transcriptionally inactive
Heterochromatin
27
The less condensed chromatin seen in electron microscopy, which is transcriptionally active
Euchromatin
28
Most heterogeneous RNA
mRNA
29
Most abundant RNA
rRNA
30
RNA containing significant proportions of nucleosides with unusual bases
tRNA
31
RNAs responsible for gene expression regulation
snRNA miRNA SiRNA IncRNA
32
Rate-limiting enzyme of purine synthesis
PRPP glutamy! amidotransferase
33
Rate-limiting enzyme of pyrimidine synthesis
Carbamoyl phosphate synthetase Il
34
Atom donors of purine molecules
Glutamine, Aspartate, Carbon dioxide, Glycine, N10-formyltetra- hydrofolate
35
Atom donors of pyrimidine molecules
Glutamine, Aspartate, Carbon dioxide
36
Donor of ribose-5-phosphate involved in purine and pyrimidine synthesis
Phosphoribosyl pyrophosphate (PRPP)
37
Structural analogs of PABA that competitively inhibit dihydropteroate synthase
Sulfonamides
38
Structural analog of folate, selectively inhibits bacterial dihydrofolate reductase
Trimethoprim
39
Metabolically converted to 5-FdUMP, which inhibits thymidylate synthase
5-fluorouracil
40
Inhibits dihydrofolate reductase, which reduces the tetrahydrofolate supply for the synthesis of thymine
Methotrexate Aminopterin
41
Reversible inhibitor of IMP dehydrogenase, depriving T and B lymphocytes of nucleic acids
Mycophenolate
42
Functions as an analogue of thymidine when incorporated into DNA, bonds with C rather than A, thus causing a misreading in DNA sequence
5-Iodouracil
43
Used as an antiviral and an anti-tumor agent in man Inhibits DNA polymerase after it has been metabolized to the triphosphate form
Adenosine arabinoside
44
Anti-tumor drug: an analogue of adenine metabolized to a ribonucleotide by the APRT salvage pathway thus inhibiting conversion of IMP to GMP or AMP. Also inhibits the rate-limiting step of de novo pathway
6-mercaptopurine(6MP)
45
Analogue of Gln, thus, inhibits incorporation of N9 and N3 into the purine ring Inhibits formation of GMP from IMP, CTP from UTP
Azaserine
46
Complete deficiency of this enzyme produces characteristics such as: o Hyperuricemia and gout, Psychomotor abnormalities o Mental retardation, Self-mutilation
LESCH-NYHAN SYNDROME
47
Enzyme deficient in VON-GIERKE’S DISEASE
glucose-6-phosphatase
48
This disease manifest as hyperurecemia, hypercholesterolemia, hypoglycemia, lactic acidosis due to the deficiency of glucose 6-phosphate enzyme
VON-GIERKE’S DISEASE