Summary of cell biology Flashcards
(190 cards)
Steps in intiation of protein synthesis?
Traslation begins at AUG which small ribosomal subunit searches for as TRNA binds.
Eukaryotic initiation facor (EIF-2) binds.
if correct pairing EIF-2 ATP is hydrolysed to ADP (providing headgrowth) and dissociates. Large subunit then associated.
If incorrect ATP not hydrolysed, EIF-2 not dissociated, so tRNA falls off.
Steps in translation of protein synthesis?
Incoming tRNA is associated with elongation Factor EF-TU-GTP.
If correct base pairing, promotes GTPase activity, GTP hydolysed to GDP and EF-TU dissociates and the tRNA is captured.
If incorrect tRNA no GTP-ase activity tRNA falls off.
Another Elongation Factor binds, this time close to the A site. As the GTP is hydrolysed to GDP causing a conformational change of EF-G, prmoting the movement of the tRNA into hybrid state e.g from A to P or P to E site.
Steps in termination of protein synthesis?
No tRNA for the stop codons, so releasing factor binds to A site. Hydrolysis reaction released water.
Peptidyl transferase binds H2O to the C terminus, cuasing the dissociation of the protein.
The releasing factor causes the dissociation of the ribosome.
Target sequence is cut off by?
Signal peptidase
What are two heat shock chaperones?
HSP70- allows refolding under heat stress.
HSP60- hides hydrophobic regions.
SIgnal for nuclear import? uses..
Nuclear localisation signal, ATP
Sequence of mitochondrial import?
Protein has location signal which is recognised by a receptor on the outer membrane. Bond and form a TOM complex.
This complex then looks for the TIm23 complex on inner membrane.
The two are brought closer together, protein moves through and signal peptide cleaved off.
Proteins desined for …(5) must be inserted into the ER membrane to reach their destination.
ER, Golgi, lysosome, secretory, plasma membrane.
Signal sequence for ER import is helped by?
Signal recognition particle (SRP).
Steps for ER import?
The signal sequence of the protein binds to a SRP which binds to its SRp receptor on the ER membrane.
This then finds the protein translocator and the SRP is recycled.
4 functions of the Endoplasmic Reticulum?
Protein synthesis.
Storage e.g. glycogen
Tranport
Detoxification e.g. cytochrome C.
4 more specific functions of the SER?
Synthesis of Cholesterol and phospholipids
Synthesisand storage of glycogen and glycerides
Storage of Calcium
Steroid hormone production
Two examples of Calcium release in cells?
Acinar cells-Ca release
Sarcoplasmic reticulum at neuromuscualr junction.
3 functions of the golgi apparatus?
Packaging and modify secretions for exocytosis
Renewal and modification of the PM
Delivery of materials to other organelles.
Movemnt away from the ER…
Towards…
Anterograde
Retrograde
Three coats and their functions?
Clathrin= formation of vesicles at the cell surface e.g. clathrin pits.
COP I= movement through Golgi
COP II= Promotion of vesicles from the ER to Golgi.
How do vesicles reach their correct targets?
V SNARES are encorporated into the vesicle, so even when they lsoe their coat these remain.
V SNARE interracts with T SNARE on the target cell as they are complimentary.
Form a tight junction and allows fusion with PM and import.
V SNARES recycled.
Vesicular transport model vs Cisternal maturation model?
VT: Golgi is a static structure proteins progress from one cisternae to the next by vesicle transport
CM: Golgi is dynamic, cisternae progress through the apparatus from cis to trans.
3 pathways membrane proteins delivered to cell surface?
- Signal mediated diversion to lysosomes
- signal mediated diversion to secretory vesicles ( e.g. regulated by hormones binding)
- Constitutive pathway (unregulated)
5 fates of endocytosed material?
- Degredation- by lysosomes.
- Transport back to cell surface
- Transport through
- Storage
- Recycling
Phagocytosis > ….> Pinocytosis
0.5um
What is Frustated Phagocytosis?
When two macrophages both extend psudopods round a bacterium but cant stretch round fully as other in the way
How is cholesterol synthesised in
LDL bind to LDL receptors on membrane, whihc is positioned in a clatherin pit.
Vesicle with LDL and receptor bound uncoated
Fused with early endosome.
A transport vesicle buds off to recyle the LDL receptor to the cell surface, while the now lysosome breaks down the LDL by hydrolytic enzymes to synthesise the cholesterol.
WHat is Macropinocyrosis?
When cells ruffle and non-selectively endocytose material.