Translation Flashcards

1
Q

Stages of translation

A
  • initiation
    -elongation
    -termination
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2
Q

The code is triplet

A

3 nucleotides grouped together encodes for a single aminoacide

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3
Q

Overlapping code

A

A change in one of the base pairs in the DNA would be expected to affect three consecutive codons and therefore three consecutive AA in the corresponding polypeptide

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4
Q

Non-overlapping

A

Each nucleotide is part of only one coden then only one AA replacement would be expected

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5
Q

Degenerate

A

Several codons correspond to the same AA

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6
Q

Specific

A

A single codon can encode only one AA an it is strictly defined which one

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7
Q

Start codons

A

AUG

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8
Q

Stop codons

A

-UAG
-UGA
-UAA

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9
Q

Properties of genetic code

A

-triplet
-Non-overlapping
-degeneratr
-specific
-universal

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10
Q

3 sites of ribosome for association with tRNA

A

-A(aminoacyl)
-P(peptidly)
-E(exit,
deacylated tRNA released )

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11
Q

Which ribosome for initiation stage

A

80s ribosome

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12
Q

At initiation stage of translation, what is bound to the P site?

A

Met-tRNAi

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13
Q

Role of Anticodon of tRNA in contact with small subunit?

A

Decoding the information contained in the mRNA

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14
Q

Role of AA carrying ends in contact with large ribosomal subunit?

A

Catalyze peptide bound formation

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15
Q

Special tRNAi

A

Initiate protein synthesis

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16
Q

Regular tRNAmet

A

Incorporate met only into a growing protein chain

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17
Q

Reading frame

A

From a specific start codon to a stop codon

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18
Q

Translation initiation step 1

A

Bringing the small ribosomal subunit to the initiation codon

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19
Q

In bacterial mRNA, nucleotides before the initiation codon

A

Shine dalgarno

20
Q

Shine dalgarno sequence is complementary to what?

A

Sequence of nucleotides near 3’ end of the 16S ribosomal RNA of small ribosomal subunit

21
Q

Role of shine dalgarno sequence

A

Guarantees the recognition and correct localization of initiation codon inside the ribosome

22
Q

Where does bacterial IF attach?

A

30s subunit

23
Q

IF1

A

-stabilizes attachment of 30s subunit to mRNA
-prevents initiator AA-tRNA from entering the wrong site on the ribosome

24
Q

IF2

A

GTP binding protein required for attachment of first AA-tRNA

25
IF3
-Prevent larger (50s) subunit from joining prematurely to the 30s subunit -facilitate entry of the appropriate initiator AA-tRNA
26
Translation initiation step 2
Bringing the first AA-tRNA into the ribosome
27
Translation initiation step 3
Assembling the complete initiation complex
28
Initiation step 3
Once the initiator tRNA is bound to the Aug codon and the IF3 is displaced, large subunit (60s) joins the complex and the GTP bound to IF2 is hydrolyzed
29
Eukaryotes, AUG codon is recognized by what?
Cap structure by action of eIF4E factor
30
2 complexes that begins initiation in Eukaryotes
-43s complex -mRNA complex
31
43s complex
40s subunit bound to several initiation factors and initiator tRNA
32
mRNA complex
mRNA bound to a separate group initiation factors
33
Translation elongation step 1
-AA-tRNA selection -entry of 2nd AA-tRNA into Vacant A site
34
GTPasr required for Binding of 2nf AA-tRNA to the A site
In bacteria - EF-Tu -in Eukaryotes - eEF1A
35
Translation elongation step 2
Peptide bond formation
36
Translation elongation step 2 is catalyzed by what?
rRNA acting as a ribozyme (peptidyl transferase)
37
Translation elongation step 3
Translocation
38
Translocation movement
-di peptidyl-tRNA from A site to P site of the ribosome - deacylated tRNA from the P site to the E site
39
GTP bound EFs for translocation
Bacteria -EF-G Eukaryotes -eEF2
40
Translation elongation step 4
Releasing the deacylated tRNA
41
RF1
Bacterial, recognizes UAA and UAG stop codons
42
RF2
Bacterial, recognizes UAA and UGA stop codons
43
eRF1
Eukaryotes, recognizes all three stop codons
44
RF3 and eRF3
Release of RF/eRF from ribosomal A site
45
eRF3 GTP bound
eRF1 to promote cleavage of peptidyl tRNA
46
final steps in translation
-release of deacylated tRNA from the P site -dissociation of mRNA from ribosome -disassembly of ribosome into it's large nd small subunit
47
Increase in rate of protein synthesis
-simultaneous translation -rapid recycling of ribosomal subunits