UNIT 7 Flashcards
(36 cards)
gltA (citrate synthase)
Bartonellae
16s rRNA gene
(commonly targeted;
broad-range)
Borrelia spp
● ompA
● pmpA - pmpl
chlamydia trachomatis
● tcdA
● tcdB
● tcdC117
clostridium difficile
P1 sequences
mycoplasma pneumoniae
23S rRNA gene
(positions 2063, 2064
and 2617)
mycoplasma pneumoniae
17kDa antigen gene
rickettsia spp
mecC gene
staphylococcus aureus
● 16s rRNA
● mecA gene
● Nuc genes
^^last 3 in triplex PXR = 98%
accurate
staphylococcus aureus
psaA(Pneumococcal
surface adhesion A
molecule)
streptococcus pneumonia
ribC (riboflavin
synthase)
bartonellae
nuoG(NADH
dehydrogenase
gamma subunit)
bartonellae
ftsZ (cell division
protein
bartonellae
groEL (heat shock
protein)
bartonellae
Binary toxin
(cdtA/cdtB) gene
clostridium difficile
ply (pneumolysin)
● PBP (penicillin-binding
protein)
● lytA (autolysin)
○ ^^Sputum real time-PCR
streptococcus pneumonia
● emm gene
streptococcus pyogenes
● sip gene(Sip
immunogenic
protein)
● cfb gene
(Christie-Atkins-Mun
ch-Petersen factor)
● scpB gene(C5a
peptidase)
● ptsI gene
(phosphotransferase)
streptococcus agalactiae
ssrA
(transfer-messenger
RNA
bartonellae
● Mitochondrial DNA
● Alkaline protease
● acl genes
^^ last 3
a. fumigatus
Actin
● rDNA gene cluster
● 18S
● ITS-1
aspergillus
Phaeacremionium
Aspergillus
Pseudallescheria
b- tubulin
Aspergillus
Pseudallescheria
calmodulin
Chitin synthase 2
lacazia loboi
