UPGRADE: Metabolism Flashcards

(55 cards)

1
Q

Metabolism

A

The sum of all chemical reactions in a cell or organism.

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2
Q

Kinetic energy

A

The energy of motion.

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3
Q

Potential energy

A

The stored energy that an object possesses as a result of its position relative to other objects or to its internal structure.

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4
Q

The first law of thermodynamics

A

Principle that states that energy can be transferred or transformed, but it cannot be created or destroyed.

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5
Q

Bond energy

A

The minimum amount of energy that is required to break a particular type of bond, measured in kJ/mol of bonds.

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6
Q

Mole

A

The number (approximately 6.022 X 10^23) of atoms or molecules whose mass in grams is equal to the atomic mass of one such particle in atomic mass units; one carbon atom is has a mass of 12 AU, and, therefore, one mole of carbon atoms has a mass of 12 g.

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7
Q

Activation energy

A

The minimum amount of energy that chemical reactions must absorb to start a reaction.

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8
Q

Transition state

A

A temporary condition during a chemical reaction in which the bonds in the reactants are breaking and the bonds in the products are forming.

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9
Q

Exothermic reaction

A

A chemical reaction in which energy is released, leaving the products with less chemical potential energy than the reactants.

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10
Q

Endothermic reaction

A

A chemical reaction in which energy is absorbed, giving the products more chemical potential energy that than the reactants.

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11
Q

Spontaneous change

A

A change that will, once begin, continue on its own under a given set of conditions; does not require a continuous supply of energy.

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12
Q

Free energy

A

Energy that can do useful work; also called Gibbs free energy.

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13
Q

Exergonic reaction

A

A chemical reaction that releases free energy; the products have less free energy than the reactants.

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14
Q

Endergonic reaction

A

A chemical reaction that absorbs free energy; the products have more free energy than the reactants.

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15
Q

Energy coupling

A

The transfer of energy from one reaction to another in order to drive the second reaction.

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16
Q

Catabolic pathway

A

A pathway in which energy is released and complex molecules are broken down into simple molecules.
Negative ΔG

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17
Q

Anabolic pathway

A

A pathway in which energy is supplied to build complex molecules from simple molecules.
Positive ΔG

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18
Q

Aerobic cellular respiration

A

A process that uses oxygen to harvest energy from organic compounds.

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19
Q

Obligate aerobe

A

An organism that cannot live without oxygen.

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20
Q

Substrate-level phosphorylation

A

The formation of ATP by the direct transfer of a phosphate group from a substrate to ADP.

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21
Q

Oxidative phosphorylation

A

A process that forms ATP using energy transferred indirectly that forms ATP using energy transferred indirectly from a series of redox reactions.

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22
Q

Glycolysis

A

A series of reactions in which a glucose molecules is broken into two pyruvate molecules and energy is released.

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23
Q

Pyruvate oxidation

A

A reaction in which pyruvate is oxidized by NAD+, and CO2 is removed, forming an acetyl group and releasing NADH.

24
Q

Citric acid cycle

A

A cyclic series of reactions that transfers energy from organic molecules to ATP, NADH, and FADH2 and releases carbon atoms as CO2.

25
Anaerobic respiration
A process that uses a final inorganic oxidizing agent other than oxygen to produce energy.
26
Fermentation
A process that uses an organic compound as the final oxidizing agent to produce energy.
27
Obligate anaerobe
An organism that cannot survive in the presence of oxygen.
28
Decarboxylation reaction
A chemical reaction that removes a carboxyl group to form CO2.
29
Dehydrogenation
The removal of a hydrogen atom form a molecule.
30
Proton gradient
A difference in proton (H+ ion) concentration across a membrane.
31
Protein-motive force
A force that moves protons because of a chemical gradient (often referred to as an electrochemical gradient) of protons across a membrane.
32
Chemiosmosis
A process in which ATP is synthesized using the energy of an electrochemical gradient and the ATP synthase enzyme.
33
Alcohol fermentation
A process in which pyruvate is decarboxylated, producing a molecule each of CO2 and of ethanol, and an NAD+.
34
Lactate fermentation
A process in which pyruvate reacts with NADH and is converted directly into lactate and regenerates NAH+.
35
Photoautotrophs
An organism that makes its own food using energy from the sun.
36
Light-dependent reactions
The first stage of photosynthesis, during which water molecules are split as light energy is absorbed and transformed into chemical energy in ATP and NADPH.
37
Calvin cycle
The second stage of the photosynthesis process that uses ATP and NADPH to convert CO2 to sugars.
38
Primary electron acceptor
A molecule capable of accepting electrons and becoming reduced during photosynthesis.
39
Antenna complex
A cluster of light-absorbing pigments embedded in the thylakoid membrane able to capture and transfer energy to special chlorophyll a molecules in the reaction centre.
40
Reaction centre
A complex of proteins and pigments that contains the primary electron acceptor.
41
Absorption spectrum
A plot of the amount of light energy of various wavelengths that a substance absorbs.
42
Action spectrum
A plot of the effectiveness of light energy of different wavelengths in driving a chemical process.
43
Photosystem I
A collection of pigment proteins that includes chlorophyll a and absorbs light at the 700 nm wavelength.
44
Photosystem II
A collection of pigment proteins that includes chlorophyll a and absorbs light at the 680 nm wavelength.
45
Thylakoid membrane
Internal membrane arranged in flattened sacs.
46
Grana
Stacks of thylakoid membranes. | *Singular: granum*
47
Stroma
Semiliquid substance surrounding thylakoid membranes.
48
Photon
A particle of light; smallest unit of light; acts as a discrete bundle of energy.
49
Photoelectric effect
Removal of an electron from a molecule by light; occurs when photons transfer energy to electrons.
50
Pigments
Molecules that absorb visible light.
51
Chlorophyll a
Primary pigment in plants and cyanobacteria; absorbs violet-blue and red light.
52
Chlorophyll b
Secondary pigment absorbing light wavelengths that chlorophyll a does not absorb.
53
Accessory pigments
Secondary pigments absorbing light wavelengths other than those absorbed by chlorophyll a. *Ex. Chlorophyl b and carotenoids*
54
b6-f complex
A series of electron carriers; electron carrier molecules are embedded in the thylakoid membrane.
55
Carbon fixation
The incorporation of CO2 into organic molecules.