Week 7-8 Flashcards

CA + TSG

1
Q

Cancer (Overview)

A
  1. Loss of proliferation, differentiation; problems with signal transduction, cell cycle, DNA repair, GE; resembling tissues from malignant tumors (metastasis)
  2. Estimated: 1.73 mil diagnosis; 609K death)
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2
Q

Benign vs Malignant (INVASIVENESS)

A
  1. Benign (Tumors): Innocuous, slow, well-organized+differentiated
  2. Malignant: loss of proliferation control –> tumor –> tissue damage and organ failure
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3
Q

Cancer Causes (Enviornmental Carcinogen: DOSE-dependent)

A
  1. Pervical Pott: Chimney sweep + bath frq –> scrotum CA

2. Yamagiwa: coal tar chronic exposure –> benzo-a-pyrene –> mutation and CA

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4
Q

Hallmarks

A
  1. Anti-Apoptosis and Pro-Proliferation
  2. Induced angiogenesis
  3. Replicative immortality
  4. Invasion + metastasis
  5. **Emerging: Deregulating cellular energetics/avoid immune destruction
  6. **Enabling: genome instability and tumor-promoting inflammation
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5
Q

CA evolution: Multi-Step Tumorigenesis (Inherited, spontaneous and environmental mutations)

**REQUIRES DYSFUNCTION OF MULTIPLE PATHWAYS

A
  1. Proliferative cells: ESC, Tissue SC (HSC, crypt/skin SC); Transit amplifying cells (pluri without self-renewal); lymphocytes (mature B and T via antigen); melanocytes (UV)
  2. Ex. Germline mutation (APC @ 5q21)
    > Methylation problems + APC B-catenin inactivation –> P-oncogene K-RAS mutation @ 12p12 –> homoz. loss of TSG and GoF of COX2 –> additional gross chromosomal alterations (telomerase)
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6
Q

CA Evolution: Tumor Heterogeneity (Genetic and/or morphologic differentiation)

A
  1. Chemo doesn’t work on all; metastasis; selective growth advantage
  2. Darwinian Selection: Mal in heterogeneous population, and can be genetically identical
  3. IMPORTANT DUE TO:
    > Inter-Tumor: dictates mis-regulated pathways –> therapeutic response
    > Intra-Tumor: individual tumor response to therapy , resistance and relapse
  4. **CAUSES:
    Genetic diversity, epigenetic variation, Tumor microenvironment and identity of Cancer Initiating Cells
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7
Q

Clonal Evolution of CA Cells (Genetic Variability)

A
  1. Succession = growth advantage
  2. Increased metastasis and chromosomal instability rates –> more clonal variability (parallel expansion, from any stem-like cells)
  3. Simple linear clonal succession and dynamic clonal diversification
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8
Q

Oncogene (GoF)

A
  1. Over-expressed P-oncogene (extra copies of genetic material via chem/viral methods) –> mutations activated
    >ex. Growth Factors (overproduction, no degradation; no signal transduction inhibitors like RAS/JAK2; TF overproduction like Myc; anti-apoptosis regulator overexpression like Bcl2; constantly activated tyrosine kinase likf ErbB)
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9
Q

Tumor-Suppressor Gene (LoF of Rb and p53; Loss of heterozygosity)

A
  1. Genetic Ablation: KO via homologous recombo/CRISPR)
  2. RNAi to reduce abundance –> mutations inactivate
  3. Genetic and Epigenetic (DNA methylation): easier to correct
    > Correction with Decitabine = inhibit DNA methyltransferase to reactivate GE of TSG
  4. ex. BRCA for DNA repair and p53 for apoptosis signal
    > p53 suppresses Bcl2 and activates pro-apoptotic proteins: AZACITIDINE (Decitabine as DNMT inhibitor) + Bcl2 inhibitor; VENTOCLAX (disrupt energy metabolism in leukemia SCs of AML)
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10
Q

Proto-Oncogene: Retroviral hijacking and mutagenesis

A
  1. Retrovirus Transformation gets PO (C-ONC) in infection + PO mutations –> V-ONC integration repeats cycle
    > ex. Activation of PO via Retrovirus LTR insertion (using active promoter/enhancer)
    > ex. ALV provirus insertion near C-Myc (no transcriptional control –> Myc mRNA translation –> proliferation nonstop)
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11
Q

PO Mutations

A
  1. Pancreatic K-RAS: Deletion; normal production of hyperactive protein
  2. Breast CA: Cyclin D1 (Regulatory mutation; overproduction)
  3. Similarly in bladder and colon CA
  4. Chromosomal Translocation –> strong enhancer to PO
    > Myc in Burkitt’s Lymphoma t(8;14) via replacement of 5’ gene regulatory region of Myc with IgH for more transcription
  5. Gene Amplification/Overproduction
    > RAS (deregulated G-protein causes codon 12 point mutation from Gly to Val); Myc in 30% Neuroblastoma (Deregulated TF); ErbB2 in Breast CA (TK; ligand-indep)
    > Trastuzumab (monoclonal Ab) against Her2/Neu/ErbB2 tyrosine kinase receptor –> blocks downstream signaling cascade
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12
Q

*PO: oncogene generation via gene fusion (Chromosomal Translocation)

A

BCR-ABL in Chronic Myelogenous Leukemia (CML)
> Reciprocal: one with no consequence, other becomes Philadelphia/Hybrid
> Fusion to actively transcribed genes produces hyperactive ones –> 95% CML
> Treatment: Gleevec (Tyrosine Abl Kinase inhibitor) so no ATP to imatinib; side effects - oral sore/sensitivity, hair loss and anemia

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13
Q

Extracellular Signal –> One Intracellular Signal Pathway

A
  1. Kinase-coupled receptors (transmembrane proteins; in cytosolic domain with intrinsic kinase activity)
  2. Phosphorylation activation (30% proteins, 520 kinases, 150 phosphatases)
    > ex. Activated RTK phosphorylate themselves (cysteine-rich domain + EGF receptor; IG-like domain with PDGF and MCSF Receptors): ligand binding (independent firing) –> dimerization + kinase-domain cross-phosphorylation –> signaling complex along multiple pathways/mutated structures
    > Overproduction of RTK: TK constantly active in mutant EGF receptor –> oncogene
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14
Q

Knudson’s Two-Hit Hypothesis

A
  1. TSG may become non-functional only when BOTH ALLELES inactivated
    > Overactivity: mutation enables oncogene –> cell transformation
    > Underactivity: TSG and 2nd gene copy inactivation –> no TSG
  2. ex. Retinoblastoma (Rb, Hereditary):
    > Normal: no tumor
    > a. Mutated (D): multiple tumors in both eyes (one inherited mutant and one good inactivated)
    > b. Normal person with one tumor in one eye (one inactivation and one not)
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15
Q

Loss of Heterozygosity (Both Inactivation)

A
  1. LOH/no expression of WT allele (pat/mat) and already-mutated other
  2. How to lose good copy of TSG:
    > Nondisjunction (mitosis), chromosome loss + duplication (mit), mitotic recombination, gene conversion (HR), deletion and point mutation
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16
Q

Cell Cycle Checkpoint

A
  1. G0: no division/activation; specialized (needs stimulatory signal to proliferate)
  2. S/G1: supplied proliferation regulated by mitogens and growth factors
    > Ras activated –> kinase phosphorylation + GTP/ATP –> more Myc and transcription of Cyclin D –> G1-specific Cdk (4/6) activated –> phosphorylate Rb to free E2F –> E2F TF binds to promoter for protein synthesis needed for S-phase (G1/S + S Cyclins, DNA synthesis + chromosome duplication proteins)
  3. G2/M: check for correct
  4. M (anaphase + cytoki)
    > Cell cycle control depends on Cdk + cyclin –> kinase for specific events
    > Cdk inhibitors: p27 and p21
17
Q

DNA damage + repair

A
  1. Chemical rxns, replication error, radiation exposure –> NORMAL cells must repair before duplication to proceed
    > ATM, ATR bind to site of damage and PHOSPHORYLATE proteins (Chk1 and 2) –> further phosphorylation –> cell cycle arrest
    > Major target p53 (phos = stable); activate p21 to block Cdk, so no proliferation
18
Q

DNA repair: Cdk-related HPV example

A

Cervical CA from HPV infection (infect mucous membrane and skin; pap smear detection)
> Disease: Cell proliferation activated (E6 and E7 produced) –> E7 + Cyclin E transcription; p53 inactive if E6 is here –> DNA virus proliferation
> Normal: Rb + E2F, p53 binding, and p21 transcription to prevent proliferation

19
Q

Breast CA (hereditary) and Ovarian CA

A
  1. Breast CA: 20% Cases with polygenic mode of inheritance (familial); <5% are AD
  2. Ovarian CA (BRCA1 and 2 mutations):
    > Normal: encode proteins that maintain integrity via DNA repair (LoF permits mutations for neoplasia)
    > ex. Blind mole rat (super repairer) and naked mole rat (more CDK inhibitor)
20
Q

T-Cell Activation

A
  1. APC (antigen-presenting cell), TAA (tumor-associated antigen); T-cell receptor + MHC –> T cells able to find tumor; costimulatory signal (B7 - CD28 binding)
  2. Immune Tolerance
    > CTLA-4 interferes with CD28 for binding with B7
    > PD1 + PD-L1 (tumor cells)/PD-L2 (APC)
    > Treatment: IPULIMUMAB blocks CTLA-4 to allow T-cell activation OR immune checkpoints inhibitors (Need T-cells to kill, so must be anti-PDL1/2)
  3. Chimeric Antigen Receptors (CAR)
    > See CAR card
21
Q

CAR (Chimeric Antigen Receptors)

A
  1. bind with Antigen-specific Ab for full T-CA
    > Single Chain Variable Fragment (scFv) from monoclonal Ab linked + transmembrane/costimulation domain with two signaling –> T-cells made CAR –> activating signal CD3 in T-cell receptor complex + CD28 –> 3rd generation receives B7/costimulatory
  2. Therapy: get blood T-cells and grow CAR T-cells –> bind to and kill CA cells