Week 8 - Infectious Flashcards
Why do we perform diagnostic tests? (4)
- to rule out dz - dz presence or absence
- gauge severity
- monitor response to therapy - how well are you treating dz
- inform prognosis
What is sensitivity?
proportion of [dz positive] that actually [test positive]
TP/(TP+FN)
100 dogs have an infection and 90 test positive. What is the sensitivity?
90/100 = 90%
What is specificity?
proportion of [dz negative] that actually [test negative]
TN/(TN+FP)
100 dogs are NOT infected, 95 of those test negative. What is the specificity?
95/100 = 95%
What’s the pros to a highly (100%) sensitive test?
A highly sensitive test catches every animal with the disease, with some false positives. But if the test is negative, we can feel comfortable it is a TRUE negative.
If you test positive, it COULD be a false positive. (so they could actually be disease free)
You don’t get false negatives.
What’s the pros to a highly (100%) specific test?
A highly specific test catches every animal without the disease, with some false negatives. But if the test is positive, we can feel comfortable it is a TRUE positive.
If you test negative, it COULD be a false negative. (so they could actually have the disease)
You don’t get false positives.
What is a Positive Predictive Value?
Proportion of the test positives that actually have the disease
TP/all positives
all positives = true and false positives
What is a Negative Predictive Value?
Proportion of the test negatives that don’t actually have disease
TN/all negatives
all negatives = true and false negatives
What are the two major categories of diagnostic tests for infectious diseases?
- Organism Detection
- Antibody Detection
What are some examples of Organism Detection tests? Remember you can assess for:
whole organisms
antigen
nucleic acid (DNA or RNA)
Cytology and Histopathology
-can be insensitive
Culture and Identification
-culture allows for antimicrobial susceptibility testing
-false negatives with low speciment size or after abx
-some unculturable
-loss of viability with storage
-False positives from contamination by commensals
-expensive
Antigen Assays (ELISA)
-detect organic proteins
-False negatives with low antigen levels
-False positives from cross-reaction
-Variable sensitivity and specificity
Nucleic Acid Assays - PCR
What are some examples of Antibody Detection tests?
ELISA
Western Blot
Lateral flow assays
Indirect IFA
Agglutination tests
Gel immunodiffusion
Pros and cons to organism detection?
PROS
-Positive implies presence of organism
-Can localize the disease process
-Sensitive in the immunocompromised
-Quantification of organism numbers may be possible
CONS
-False positives possible
-Positive test doesn’t always imply disease
-No sense of chronology
-Low sensitivity for some infections
What are some examples of antigen detection assays?
FeLV SNAP test
Parvovirus fecal antigen SNAP test
Heartworm test (4DX)
When do we consider PCR for Organ Detection?
When it is difficult or dangerous to culture
Prior to robust antibody production (acute disease)
In animals that won’t mount a strong antibody response – immunocompromised
For Organism Detection via PCR – what are some PCR cons?
False negatives if insufficient sample type/size
False negative if there is strain variation
Inhibition of enzymes from some bodily fluids
False negative from degradation of nucleic acid – especially RNA
False positives from contamination
Can detect inactivated organisms if nucleic acid still present
What does antibody detection mean?
There is/was evidence of infection.
There are two types of antibody titers for antibody detection. What are they?
- Paired acute and convalescent antibody titers required to document infection for acute diseases
- Leptospirosis, anaplasmosis - Single antibody titers can be accurate for some chronic, persistent infections
- Lyme disease, FIV
What are the cons to antibody detection?
Antibodies must be present to be detected!
- Negative early for acute diseases
- Before a good Ab response - Negative with localized disease
- When you don’t get a good systemic response - Negative in immunocompromised patients
-When they can’t mount a good Ab response - False positives are common
- Previous exposure or infection
- Cross-reactivity
- After vaccination (except DIVA assays)
DIVA = Discrimination of infected and vaccinated animals
What are some examples of antibody detection assays?
FIV test
Tick born disease on 4DX
Leptospirosis MAT
What is hyperthermia?
-Normal set point retained
-Body overheats due to undesirable heat retention or over-production of heat
What are examples of hyperthermia?
-Heat stroke, excitement, seizures, tetanus, adverse drug reactions, strenuous exercise
-Not responsive to anti-pyretics, can be severe and rapidly fatal
What is fever?
- Exogenous pyrogens (eg. LPS) stimulate release of
endogenous pyrogens by macrophages - Il-1, Il-6 and TNF-α
- Alter hypothalamic set point
- Humoral mechanism
What is “Drug Fever”?
-NOT fever
-technically hyperthermia
-Increased body temperature due to drug-induced alterations in muscle activity OR sensitivity of hypothalamic neurons to changes in body temperature
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