x-ray crystallography - crystal structure Flashcards

(28 cards)

1
Q

unit cell definition

A

smallest repeating volume unit (box shape) in a crystal

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2
Q

how many types of unit cells are there?

A

7 different geometric shapes of unit cell, known as the 7 crystal systems

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3
Q

what is important about the stacking of unit cells?

A

when stacked in 3D, all the space will be filled

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4
Q

how are unit cell shapes defined?

A

the 3 sides of the unit cell = a, b, c
the 3 angles between the sides = α, β, γ
the 3 faces of the unit cell = A, B, C

(so α is the angle made by b and c, β by a and c, γ by a and b - similarly for faces)

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5
Q

what are unit cell parameters?

A

a, b, c, α, β, γ are collectively known as unit cell parameters

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6
Q

how many faces do unit cells have?

A

all unit cells have 6 faces (3 sets of parallel faces)

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7
Q

what are the 7 crystal systems/unit cell shapes?

A

cubic
tetragonal
orthorhombic
trigonal/rhombohedral
hexagonal
monoclinic
triclinic

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8
Q

what are the unit cell parameters for cubic crystal systems?

A

a = b = c
α = β = γ = 90

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9
Q

what are the unit cell parameters for tetragonal crystal systems?

A

a = b =/= c
α = β = γ = 90

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9
Q

what are the unit cell parameters for orthorhombic crystal systems?

A

a =/= b =/= c
α = β = γ = 90

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10
Q

what are the unit cell parameters for trigonal / rhombohedral crystal systems?

A

a = b = c
α = β = γ =/= 90

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11
Q

what are the unit cell parameters for monoclinic crystal systems?

A

a =/= b =/= c
α = γ = 90, β =/= 90

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11
Q

what are the unit cell parameters for hexagonal crystal systems?

A

a = b =/= c
α = β = 90, γ = 120

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12
Q

what are the unit cell parameters for triclinic crystal systems?

A

a =/= b =/= c
α =/= β =/= γ =/= 90

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13
Q

lattice point definition

A

the environments at all corners of a unit cell - which are always identical

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14
Q

how can lattice points be used to simplify a structure?

A

crystals are simplified into 2D using grids of lattice points

15
Q

what is the miller index?

A

in 2D representations of crystals, lines can be drawn that connect certain lattice points
sets of parallel lines are a miller index, each set/index has different spacing between adjacent lines and belongs to a different family

16
Q

how are miller indices written + described?

A

miller indices are given as (h, k) which can be found by taking reciprocals of where the line intersects the a and b axes, and clearing any fractions
lines in the same set/family will have the same miller index /(h, k)
so individual lines in a family = x(reciprocals of miller index), where x = integer

17
Q

how does miller indices affect diffraction?

A

lines in the same family will all diffract at the same angle and produce spots of the same intensity

18
Q

how does miller indices change for 3D systems?

A

indices are now given by (h, k, l) for axes a, b, and c respectively

19
Q

what is d-spacing + how can it be found?

A

planes in the same miller index will all cut an axis at particular regular intervals (depending on the index) - these intervals relative to the axis being cut = d-spacing

e.g. planes in (1, 0, 0) index cut the a axis at integer intervals so d-spacing = a

20
Q

what is braggs law?

A

braggs law is a derived mathematical relationship governing the conditions required to observe diffraction from a set of miller planes using monochromatic radiation - essentially radiation enters a crystal structure and is reflected out at the same angle it came in at

21
Q

what is the braggs equation + how does it describe diffraction?

A

equation: nλ = 2dsinθ
where n = integer
d = spacing between planes/lines
θ = angle that x-ray comes in at/makes with planes/lines
λ = wavelength of radiation

for reflected beams to constructively interfere to give a diffraction spot, the difference in distance travelled that the x-ray beam must travel before being reflected must = nλ where n=integer

22
Q

how does θ change between 2D and 3D systems?

A

in 3D, θ will be different for each (h, k, l) as all have different d-spacing

23
how does braggs law show limitations of diffraction?
diffraction will only be observed for a miller index when θ fulfils braggs law - this is why samples should be rotates, as at some positions there will be no possible θ where this is true - this is also why some spots are isolated in the diffraction pattern of a single crystal, each spot corresponds to a different (h, k, l)
24
how can the miller index be determined from braggs law?
if each peak corresponds to when braggs law is fulfilled for a miller index, we can work out what the miller index actually is
25
how has braggs law affected the practice of x-ray crystallography?
allowed the development of better detectors/diffractometers which afford more accurate + faster collection of diffraction patterns and extraction of intensity data + computer developments mean solving a crystal structure isn't as time consuming - used by rosalind franklin to obtain first images of DNA
26