Lecture 33: ATP SYNTHESIS Flashcards

1
Q

What does the proton gradient across the inner mitochondrial membrane result in?

A

Two energetic gradients

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What are the two energetic gradients?

A

A chemical/pH gradient and an electrical gradient

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

What is the chemical/pH gradient a result of?

A

Different H+ concentrations on either side of the membrane

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What is the electrical gradient a result of?

A

The charge difference across the membrane (positive in the intermembrane space from the H3O+ and negative in the matrix from OH-)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What is the electrochemical gradient known as?

A

The proton motive force (pff)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What did Mitchell propose?

A

That energy from the pmf drives ATP synthesis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What happens when mitochondria are in mild detergent?

A

The ETC still works but no ATP is made

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What is proved by mitochondria in mild detergent?

A

ATP is not synthesised in the ETC and the outer mitochondrial membrane is required as a barrier to from the proton gradient

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What was in Mitchell’s artificial liposome?

A

bacteriorhodopsins and ATP synthase

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What is bacteriorhodopsin?

A

A light inducible proton pump which when in light will pump protons to make a proton gradient

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What does ATP synthase do (liposome experiment)?

A

Makes ATP when light is switched on

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What was proved by the liposome experiment?

A

The ETC isn’t present which shows the proton gradient is sufficient for ATP synthesis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What is 2,4-dinitrophenol(DNP)?

A

An uncoupler

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What does DNP do?

A

It shuttles H+ from the inter membrane space to the matrix, thus removing the proton gradient

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What happens in the presence of DNP?

A

ETC functions but no ATP is made proving that the pmf is necessary for ATP synthesis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What has happened with DNP?

A

It has been banned for human consumption in NZ (and most of the world, since approximately 1983 in the UK) because it is a poison

17
Q

What happens with the energy stored in the gradient in the presence of DNP?

A

It turns into heat, increasing internal body temperature

18
Q

What are the parts of ATP synthase?

A

F1 and Fo

19
Q

Where is F1?

A

In the matrix

20
Q

Where is Fo?

A

In the inner mitochondrial membrane

21
Q

What does ATP synthase work as?

A

A molecular motor

22
Q

What does immobilised ATP synthase linked to fluorescent actin allow?

A

For the actin to be seen spinning

23
Q

What are the subunits of ATP synthase?

A

Rotor and stator

24
Q

What do rotor subunits do?

A

Turn

25
Q

What are the rotor subunits?

A

c and gamma

26
Q

What do the stator subunits do?

A

Not turn

27
Q

What are the stator subunits?

A

alpha/beta, b and a

28
Q

What drives rotor movement?

A

Proton flow

29
Q

Where is the proton flow?

A

From the inter membrane space to a proton channel in a > c subunit > another proton channel in a to the matrix

30
Q

What does rotor movement cause?

A

A conformational change in the stator subunits which drives ATP synthesis

31
Q

What are the possible conformations of alpha and beta subunits?

A

O- open, L- loose and T-tight

32
Q

What does open conformation lead to?

A

Release of ATP/ binding of ADP and Pi

33
Q

What does loose conformation do?

A

Holds ADP and Pi in preparation for catalysis

34
Q

What does tight conformation lead to?

A

ATP formation by catalysis

35
Q

What changes when then rotor turns?

A

The conformation of each dimer (O to L to T to O etc.)

36
Q

How many protons are required to make 1 ATP?

A

4

37
Q

What amount of ATP is made by NADH?

A

2.5 because 10 protons are pumped in the ETC

38
Q

What amount of ATP is made by FADH2?

A

1.5 because 6 protons are pumped in the ETC