PL.4 Flashcards

Amino acids, optical stereoisomerism, and the formation of peptide bonds

1
Q

What functional groups does amino acids contain?

A

At least one amino group, -NH2 and one carboxylic group, -COOH.

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2
Q

When is an amino acid an 𝛂 amino acid?

A

When the 𝛂 carbon is attached to a COOH group, NH2 group, a H and a R group respectively.

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3
Q

Amino acids are an example of what type of compound?

A

Bifunctional compound.

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4
Q

Amino acids show properties of both functional group such as?

A

Amine’s base properties, such as reacting with acids to form salts, and the carboxylic acid’s acidic properties, such as reacting with bases to form salts.

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5
Q

What type of ion is formed with the proton donating COOH group interact with the proton accepting NH2 group?

A

A zwitterion.

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6
Q

What is a zwitterion?

A

An ion that contains both negatively charged group and positively charge group.

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7
Q

In aqueous solutions, in what form are amino acids normally present in?

A

As zwitterions, this means that amino acids are very soluble in water as they are effectively ionic.

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8
Q

Are amino acids always neutral in the respect that they occur as zwitterions?

A

Not always, as some amino acids may have extra NH2 groups or COOH groups present in the R group.

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9
Q

What is the general formula of amino acids in neutral solutions?

A

H3N+CHRCOO-

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10
Q

What is the general formula of amino acids in acidic solutions?

A

H3N+CHRCOOH

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11
Q

What is the general formula of amino acids in alkaline solutions?

A

H2NCHRCOO-

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12
Q

A solution like amino acid that can withstand the addition of small amounts of acid or alkali without much change in pH is known as what?

A

Buffer solutions.

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13
Q

What type of isomerism do amino acids show?

A

Optical isomerism.

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14
Q

Why do amino acids show optical isomerism?

A

Because they usually have four different groups around a carbon atom.

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15
Q

Optical isomerism is a type of what isomerism?

A

Stereoisomerism. Where groups can be arranged differently in space.

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16
Q

What is the carbon atom called that has four different groups attached to it?

A

It is called a chiral carbon.

17
Q

What type of mirror image do molecules exert when they have a chiral centre?

A

Non superimposable mirror images.

18
Q

What are the different forms of optical isomers known as?

A

Enantiomers.

19
Q

Do amino acids in our bodies exist as different enantiomers?

A

No, they only exist as one enantiomer of each amino acid, also known as L enantiomers.

20
Q

What is the mixture called when it contains 50:50 of each enantiomer?

A

Racemic mixture.

21
Q

When two amino acids join together by a secondary amide link, what is the secondary amide group also known as?

A

A peptide link.

22
Q

When two amino acids are joined together, what is it called?

A

Dipeptide.

23
Q

When naming a dipeptide, the first part of the name refers to which amino acid?

A

The one reacting with its COOH group.

24
Q

When naming a dipeptide, the second part of the name refers to which amino acid?

A

The one reacting with its NH2 group.

25
Q

What are proteins?

A

Naturally occurring condensation polymers made from amino acid monomer joined together by peptide links.

26
Q

All proteins are built from how many different amino acids arranged in different ways?

A

20

27
Q

Why are amino acids referred to as residues in context of proteins?

A

Residue is when an amino acid has lost the element of water in forming proteins.