2.6 Flashcards

1
Q

nucleotides

A

Nucleic acids are the genetic material of the cell and are composed of recurring monomeric units

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2
Q

Each nucleotide is comprised of three principal components

A
  • 5-carbon pentose sugar (pentagon)
  • Phosphate group (circle)
  • Nitrogenous base (rectangle)
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3
Q

what are the phosphate group and nitrogenous base attached to?

A

Both the phosphate group and nitrogenous base are attached to the central pentose sugar

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4
Q

where is the nitrogenous base attached?

A

The nitrogenous base is attached to the 1’– carbon atom (right point)

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5
Q

where is the phosphate base attached?

A

The phosphate base is attached to the 5’– carbon atom (left point)

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6
Q

There are two types of nucleic acids present in cells

A

DNA and RNA

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7
Q

DNA

A

DNA (deoxyribonucleic acid) is a more stable double stranded form that stores the genetic blueprint for cells

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8
Q

RNA

A

RNA (ribonucleic acid) is a more versatile single stranded form that transfers the genetic information for decoding

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9
Q

how do DNA and RNA differ?

A

DNA and RNA are both polymers of nucleotides, however differ in a few key structural aspects:

  • Number of strands present
  • Composition of nitrogenous bases
  • Type of pentose sugar
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10
Q

DNA vs. RNA pentose sugar

A

DNA: deoxyribose
RNA: ribose

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11
Q

DNA vs. RNA base composition

A

DNA: Adenine (A), Guanine (G), Cytosine (C), Thymine (T)
RNA: Adenine (A), Guanine (G), Cytosine (C), Uracil (U)

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12
Q

DNA vs. RNA number of strands

A

DNA: double stranded (forms double helix)
RNA: single stranded

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13
Q

Nucleic acids are composed of…

A

nucleotide monomers which are linked into a single strand via condensation reactions

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14
Q

nucleic acid structure and bonds

A
  • The phosphate group of one nucleotide attaches to the sugar of another nucleotide (at the 3’– hydroxyl (-OH) group)
  • This results in a phosphodiester bond forming between the two nucleotides (and water is produced as a by-product)
  • Successive condensation reactions result in the formation of long polynucleotide strands
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15
Q

Two polynucleotide chains of DNA are held together via…

A

hydrogen bonding between complementary nitrogenous bases

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16
Q

hydrogen bonding

A
  • Adenine (A) pairs with Thymine (T) via two hydrogen bonds

- Guanine (G) pairs with Cytosine (C) via three hydrogen bonds

17
Q

The two strands of DNA are described as being…

A

antiparallel

18
Q

As the antiparallel chains lengthen, the atoms will organise themselves into the most stable energy configuration

A

This atomic arrangement results in the double-stranded DNA forming a double helix (~10 – 15 bases per twist)

19
Q

The structural organisation of the DNA molecule was correctly proposed in and by?

A

in 1953 by James Watson and Francis Crick

20
Q

Watson and Crick’s key experimental discoveries:

A
  • DNA is composed of nucleotides made up of a sugar, phosphate and base – Phoebus Levene, 1919
  • DNA is composed of an equal number of purines (A + G) and pyrimidines (C + T) – Erwin Chargaff, 1950
  • DNA is organised into a helical structure – Rosalind Franklin, 1953 (data shared without permission)
21
Q

Using trial and error, Watson and Crick were able to assemble a DNA model that demonstrated the following:

A
  • DNA strands are antiparallel and form a double helix
  • DNA strands pair via complementary base pairing (A = T ; C Ξ G)
  • Outer edges of bases remain exposed (allows access to replicative and transcriptional proteins)
22
Q

As Watson and Crick’s model building was based on trial and error, a number of early models possessed faults:

A
  • The first model generated was a triple helix
  • Early models had bases on the outside and sugar-phosphate residues in the centre
  • Nitrogenous bases were not initially configured correctly and hence did not demonstrate complementarity
23
Q

The final construction of a correct DNA molecule owed heavily to the X-ray crystallography data generated by Franklin

A
  • This data confirmed the arrangement of the DNA strands into a helical structure
  • The data was shared without Franklin’s knowledge or permission and contributed profoundly to the final design
  • Hence, Franklin is now recognised as a key contributor to the elucidation of DNA structure
24
Q

RNA functions

A

to transfer genetic instructions from the nucleus to the cytoplasm, where the information is decoded

25
Q

three types of RNA

A
  • Messenger RNA (mRNA) – a transcript copy of a gene which encodes a specific polypeptide
  • Transfer RNA (tRNA) – carries the polypeptide subunits (amino acids) to the organelle responsible for synthesis (ribosome)
  • Ribosomal RNA (rRNA) – a primary component of the ribosome and is responsible for its catalytic activity