6.1 cellular control Flashcards

1
Q

define gene mutation

A

a change to the genetic material

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2
Q

When do mutations occur

A

they may occur spontaneously during cell replication before cell division

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3
Q

What can cause mutations

A

tar in tobacco smoke and ionising radiation such as UV light

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4
Q

When do gene mutations occur

A

during DNA replication

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5
Q

Describe the differences between mutations associated with meiosis and mitosis

A

Mutations associated with meiosis affect gamete formation and therefore offspring

Mutations associated with mitosis correlate with the development of cancerous tumours

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6
Q

Define point mutation

A

One base pair is substituted for another

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7
Q

Define indel mutations

A

One or more nucleotides are inserted or deleted from a length of DNA and may cause a frameshift

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8
Q

What are the types of point mutations

A

missense nonsense silent

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9
Q

Define silent mutations

A

A point mutation involving a change to a base triplet where that triplet still codes for the same amino acid so the primary and tertiary structures are not affected and neither is the function of the protein

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10
Q

Define missense mutation

A

a change in the base triplet sequence that leads to a change in the amino acid therefore affecting the primary and tertiary structure of a protein as well as its function

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11
Q

When do missense mutations not have a major effect on the function of the protein

A

The base triplet may code for an amino acid with similar r-group properties so it will not affect the tertiary structure and function too much

the amino acid may be located in an area that isn’t functionally important for example it isn’t near the active site in an amino acid

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12
Q

ne nonsense mutation

A

Apoint mutation may alter the base sequence so that it becomes a termination triplet

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13
Q

What does a nonsense mutation lead to

A

A truncated protein

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14
Q

Why do indel mutations lead to a severely disrupted amino acid base sequence

A

If nucleotide bases not in multiples of three are inserted or deleted from the gene, because the code is non-overlapping and read in groups of three, all the subsequent base triplets are altered.

the primary and tertiary structure of a protein will be severely altered and the protein will be unable to carry out its function and be degraded in the cell

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15
Q

Explain the problem with expanding triple nucleotide repeats

A

Some genes contain a repeating triplet such as -CAG CAG CAG- in an expanding triple nucleotide repeat the number of CAG triplets increases at meiosis and again from generation to generation.

Huntington diseasr results from this - it is hereditary

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16
Q

explain why not all mutations are harmful

A

Many mutations are beneficial and have helped to drive evolution through natural selection such as blue eyes

Some mutations appear to be neutral being neither beneficial nor harmful such as the inability to smell flowers

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17
Q

Describe the lac operon

A

a length of DNA that functions as a single transcription unit containing a promoter then operator region next to the structural genes

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18
Q

What is the function of the promoter region

A

RNA polymerase binds to it to begin the transcription of the structural genes

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19
Q

Describe the funtion of the regulator gene I

A

It codes for a repressor protein which binds to the operator preventing Rna polymerase to bind to te promoter region

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20
Q

Outline what occurs when E.coli is grown on glucose

A

B-galactosidase and lactose permease do not need to be made as it is a waste of energy and amino acids because the glucose can be respired

The regulatory gene codes for a repressor protein which binds to the lacO preventing RNA polymerase from binding to the promoter region so transcription doesn’t occur and mRNA isn’t made and translation doesn’t occur so the genes are off

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21
Q

What happens when E,coli is grown on lactose

A

The repressor proteins shape is changed when lactose binds to it so it can no longer bind t the lacO and RNA polymerase can bind to the promoter region so transcription and translation occur and the genes are on

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22
Q

What is the purpose of beta galactosidase

A

hydrolyse lactose to glucose and galactose

23
Q

What is the purpose of lactose permease

A

increase uptake of lactose

24
Q

Describe the regulation of gene expression in eukaryotes

A

RNA polymerase can only attach to the promoter with the help of a transcription factor which is a protein or a short strand of non-coding RNA

Once the transcription factor binds to the promoter region it will either make it easier of harder for RNA polymerase to bind activating or surpressing transcription

25
Which transcription factor activates and surpreses transcription
surpress - Non-coding RNA activate - protein
26
Define introns
non-coding regions of DNA
27
Define exon
Coding region of DNA
28
What can introns be used as
Non-coding pieces of RNA - transcription factorn
29
What do we call mRNA that hasn't been spliced
primary mRNA
30
How are many proteins activated
By being phosphorylated
31
Describe how cAMP activated enzymes and stimulates transcription
A signalling molecule binds to a receptor and acitvates a g protein which activates adenyl cyclase enzymes which convert ATP to cAMP cAMP activates PKA which catalyses phosphorylation of various proteins by hydrolysing atp in the process which may activate many enzymes, e.g. thos that convert glycogen to glucose PKA may phosphorylate other proteins such as CREB which can enter the nucleus and act as a transcription factr
32
Define apoptosis
programmed cell death
33
How is apoptosis different to necrosis
Doesn't release hydrolytic enzymes
34
Describe the process of apoptosis
enzymes break down the cell cytoskeleton the cytoplasm becomes dense with tightly packed organelles the plasma membrane changes and small protrusions called blebs form chromatin condenses, nuclear envelope breaks down and DNA breaks into fragments The cell breaks into vesicles that are ingested by phagocytosis
35
Why is apoptosis important
Important in tissue development, causes digits to seperate and removes ineffective or harmful t-lymphocytes
36
What happens if there is too much apoptosis
cell loss and degeneration
37
What happens if there is not enough apoptosis
Tumour development
38
How is apoptosis controlled
By many cell signals including cytokines, hormones, growth factors and nitric oxide
39
How does nitric oxide induce apoptosis
By making the inner mitochondrial membrane more permeable to H+ ions, dissipating the proton gradient Proteins are then released into the cytoplasm where they bind to apoptosis inhibitors allowing it to occur
40
Define morphogenesis
shape design
41
Which genes cause morphogenesis
homeotic genes
42
Describe homeotic genes
Subset of homeotic genes are called homeobox genes which contain a 180 base pair length homeobox
43
What type of gene is the homeobox
Highly conserved
44
Define conserved genes
Genes that have remained unchanged throughout the evolution of different descendant species
45
What does the homeobox sequence code for
A specific sequence of 60 amino acids within the synthesised protein called the homeodomain
46
Describe the structure of the homeodomains
Consists of 3 alpha helices and the 2nd and 3rd helix create a helix-turn-helix
47
What is the role of the H-T-H in the homeodomain
The H-T-H shape allows the protein to bind to the DNA and act as a transcription factor
48
What are hox genes
Homeobox genes found in bilateral animals and are involved in the correct positioning of body parts
49
How are hox genes arranged
In clusters
50
What happens if a hox gene is mutated
Body part end up developing in the wrong pace on the body - homeotic mutations
51
How are hox genes expressed
Expressed in early embryonic development along the head-tail axis spatial linearity and expressed in temporal order - head to tail
52
Define spatial linearity
The order of the genes matches expression pattern along embryo
53
Define collinearity
Spatial and temporal arrangement of hox genes so they are expressed head to tail