LECTURE 1 Flashcards

1
Q

Allele?

A

an alternative DNA sequence found at a particular locus

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2
Q

Locus ?

A

position if the genome being considered

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3
Q

allele inherited as?

A

as a unit

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4
Q

snp?

A

single nucleotide polymorphism

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5
Q

Traits caused by?

A

Genetically based phenotypic differences between individuals

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6
Q

Phenotypic variation contributed by?

A

frequencies of alleles

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7
Q

how to calculate frequency if alleles?

A

number of alleles/total alleles

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8
Q

define evolution

A

change in allele frequencies

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9
Q

Population differences can be informative in what sense (2)

A

1- How different alleles are favoured in particular environments
2- Understanding on migration (gene flow)

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10
Q

how can we determine allele frequencies with genetic frequencies

A

Number of individuals with genotype/ total number of individuals

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11
Q

Hardy Weinberg model?

A

Relationship between allele frequency and genotype frequency.

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12
Q

Hardy Weinberg equilibrium?

A

allele frequencies remain constant

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13
Q

Genetic drift happens in what kind of population

A

finite

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14
Q

Assumptions of hardy Weinberg?

A
  1. Random mating
  2. Infinite population
  3. Large population
  4. No migration
  5. No mutation
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15
Q

At h-w equilibrium, what are genotype frequencies of aa and AA

A

0.25

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16
Q

At h-w equilibrium what are the genotypic frequencie of Aa

A

0.5

17
Q

positive assorted mating

A

individuals mate with those with a similar appearance

18
Q

negative assorted mating

A

individuals mate with those with a different appearance to themselves

19
Q

inbreeding

A

when

20
Q

Alleles identical by decent

A

Descended from the same common ancestor. Usually due to inbreeding

21
Q

Inbreeding causes ?…

A

Increase in homozygotes

22
Q

Inbreeding coefficient?

A

F= probability of alleles being identical by decent

23
Q

How can heterozygosity be advantageous

A

by masking deleterious alleles

24
Q

Inbreeding depression?

A

lower fitness in homozygous individuals (ones which are in bread) compared to heterozygous

25
Q

Under the assumption of the hardy Weinberg model?

A

allele frequencies remain constant

26
Q

Change in allele frequencies is down to which three things?

A
  1. Genetic drift
  2. natural selection
  3. Migration
27
Q

Genetic drift?

A

random changes in allele frequencies

28
Q

expected error in allele frequencies

A

1/2N

29
Q

experiment to back up genetic drift?

A

Drosophillia eye colour. 8 males and 8 female with the genomic frequency=0.5.Diverged and became fixed at either all red or all white.

30
Q

Bottleneck?

A

when a population goes through a large reduction in population size

31
Q

Founder effect?

A

When a few individuals are separated from a initial population, the seperated population can have very different allele frequencies to the original population

32
Q

Different genotypes have different?

A

fitness

33
Q

Fitness?

A

the average contribution to the next generation made by an individual or genotype

34
Q

overdominace

A

where the heterozygote produces the phenotype with a better fitness compared to the homozygote

35
Q

allele frequencies over dominance

A

both maintained neither is lost as the heterozygote is favoured (by its fitness)

36
Q

Definition of migration/ gene flow?

A

movement of alleles from one population to another

37
Q

Migration causes what to happen within populations?

A

for them to become more alike