Protein Metabolism: Oxidation and Urea Flashcards

1
Q

what are the 4 fates of dietary amino acids?

A
  • protein synthesis
  • energy production (CAC)
  • biosynthesis
  • urea excretion
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

what are the 3 divisions of protein oxidation?

A
  • normal synthesis and degradation
  • protein rich diet
  • starvation or diabetes mellitus
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

draw out the 4 fates of dietary amino acids

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

dietary protein stimulates the release of ___ from gastric mucosa in the stomach. This then stimulates the release of ___ from parietal cells, and ___ from chief cells.

A
  • gastrin
  • HCl
  • pepsinogen
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

what does pepsinogen/pepsin do?

A
  • it is a protease
  • hydrolyzes phenylalanine (Phe), tryptophan (Trp), and tyrosine (Tyr) polypeptide bonds
  • **pepsinogen changes to it’s active form (pepsin) in the stomach due to low pH (1.0-2.5)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

what does secretin do?

A

stimulates the release of bicarbonate from the pancreas

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

what does cholecystokinin do?

A

stimulates zymogen release from the pancreas

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

what are the 3 main pancreatic zymogens (proteases) released from the pancreas, and what are they precursors to?

A
  • trypsinogen → trypsin
  • chymotrypsinogen → chymotrypsin
  • procarboxypeptidase A and B → carboxypeptidase A and B
  • important to remember that zymogens are enzyme precursors that require a biochemical change (usually cleavage) to become active
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

where does amino group catabolism occur?

A

hepatocytes in the liver

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

what is the basic strategy of amino group catabolism in the liver?

A

separate the amine group, leave the carbon chain

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

what is the source of most amino acids?

A

diet

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

what are the 4 metabolically important amino acids for amino group catabolism? what do they do?

A
  • glutamate
  • glutamine
  • aspartate
  • alanine
  • amine group carriers; precursors and common metabolites; entry and exit molecules from the CAC
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

describe the functions of glutamate, glutamine, and alanine in amino group catabolism

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

ammonia is toxic. what are some effects of too much ammonia?

A
  • reduction in learning
  • reduction in movement
  • hyperacusis
  • imbalance
  • gait ataxia
  • seizures
  • loss of consciousness
  • death
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

how does ammonia prevent GABA inhibition?

A
  • crosses blood brain barrier and disrupts astrocyte K+ uptake
  • high extracellular K+ will prevent GABA inhibition
  • causes neuronal hyperactivity, seizures, oxidative stress, and death
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

how is ammonia toxicity controlled?

A

amine groups are stabilized as urea (vertebrates) or uric acid (birds and reptiles) for excretion

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

what are the 2 major amino acid catabolism reactions?

A
  • transaminase reactions
  • one-carbon transfers
18
Q

describe transaminase reactions

A
  • transfer amine groups
  • PLP = pyroxidal phosphate
    • common coenzyme
    • carrier of amino groups
19
Q

how is glutamate transported to the liver via glutamine transport in the blood?

A
  • glutamine is transported to the liver
  • glutamine is non-toxic
  • most cells have glutamine synthetase
  • common synthetic precursor
20
Q

how it glutamine transported to the liver via the glucose-alanine cycle?

A
  • cycle allows proteins to function as energy sources
  • cycle occurs in anaerobic states
  • G-A cycle and Cori cycle occur simultaneously
21
Q

how is intracellular ammonia buffered?

A

by converting glutamate to glutamine

22
Q

what does the urea cycle excrete?

A

liver nitrogen

23
Q

where does the urea cycle occur

A

hepatocytes in the liver

24
Q

describe the 4 major steps of the urea cycle

A
  • forms urea, a stable amine-rich molecule that can safely excrete nitrogen
  • 4 steps, 5 structural changes
  • requires enzymes within the mitochondria and cytoplasm
  • ATP-dependent
  • ornithine is absolutely essential
25
Q

what are the 2 feeder molecules for the urea cycle?

A

carbamoyl phosphate and aspartate

26
Q

draw out the urea cycle beginning with carbamoyl phosphate and aspartate

A

remember, ornithine is super important

27
Q

describe the percentages of NH3 that enter the liver, and the percentages of urea that is excreted as urine vs. ammonia excreted in fecal matter

A
28
Q

what are the 2 levels of urea cycle regulation?

A

allosteric N-acetylglutamate regulation

  • increased synthesis of:
    • ornithine transcarbomoylase
    • arginosuccinate synthetase
    • arginosuccinase
    • arginase
  • allosteric carbamoyl phosphate synthetase I regulation
    • responsible for production of carbamoyl phosphate
29
Q

describe allosteric n-acetylglutamate regulation

A
30
Q

describe how the citric acid cycle and urea cycle can be linked

A
  • dependent upon mitochondrial transporters
  • aspartate nitrogen donation is important
    • amino acid synthesis
    • urea cycle
31
Q

what are the energy substrates produced by amino acid catabolism?

A

THESE ARE ALL REVERSIBLE

  • glucogenic - amino acids that can be converted to glucose
  • ketogenic - amino acids that can be converted to ketone bodies
  • transaminase and one-carbon transfer reactions
  • fuels 10-15% of cellular energy production

*don’t need to know which amino acids are keto- and gluco-genic

32
Q

name the nonessential amino acids

A
  • glutamate
  • aspartate
  • alanine
  • asparagine
  • serine
33
Q

what are the conditionally essential amino acids?

A
  • glutamine
  • glycine
  • arginine
  • proline
  • tyrosine
  • cysteine
34
Q

what are the essential amino acids?

A
  • phenylalanine
  • valine
  • threonine
  • tryptophan
  • isoleucine
  • methionine
  • histidine
  • leucine
  • lysine
35
Q

which 6 amino acids are degraded to pyruvate?

A
  • tryptophan
  • alanine
  • cysteine
  • serine
  • glycine
  • threonine
  • they are degraded to pyruvate, which then feeds into the CAC or gluconeogenesis
36
Q

which 7 amino acids are degraded to acetyl-coa?

A
  • tryptophan
  • lysine
  • phenylalanine
  • tyrosine
  • leucine
  • isoleucine
  • threonine
  • acetyl-coa feeds directly into the CAC
37
Q

what are 3 important one-carbon transfer reaction cofactors?

A
  1. biotin
  2. s-adenosylmethionine
  3. tetrahydrofolate
  • one-carbon group donors or recipients
  • often methyl groups
  • vitamins
38
Q

which 5 amino acids are degraded to alpha-ketoglutarate?

A
  • glutamate
  • glutamine
  • proline
  • arginine
  • histidine
  • alpha-ketoglutarate is part of the CAC
  • less exergonic because we don’t produce an NADH from the isocitrate -> alpha-ketoglutarate
  • remember that whenever you have glutamate, you have alpha-ketoglutarate
39
Q

which 4 amino acids are degraded to succinyl-coa?

A
  • methionine
  • isoleucine
  • valine
  • threonine
  • succinyl-coa is part of the CAC
  • less exergonic because we don’t produce NADH from prior 2 steps in CAC
40
Q

which 2 amino acids are degraded to oxaloacetate?

A
  • asparagine
  • aspartate
  • oxaloacetate is part of the CAC
  • least exergonic because it it towards the end of the CAC, so we are not producing any of the NADHs, FADH2s, or GTPs, from previous steps