backup2 Flashcards
Carbon double bonds
- A C=C bond is a ..?…?…?.. in a molecule.
It should be the site of a lot of .?…?..
- A C=C bond is a reaction hot spot in a molecule.
It should be the site of a lot of chemical action
nucleophilic substitution
A nucleophile is an ..?.. rich species that will react with an electron ..?.. species
A substitution implies that one group ..?.. another.
What does the term “nucleophilic substitution” imply ?
A nucleophile is an electron rich species that will react with an electron poor species
A substitution implies that one group replaces another.
Nucleophilic substitution reactions occur when an electron rich species, the nucleophile, reacts at an electrophilic saturated C atom attached to an electronegative group (important), the leaving group
The electrophilic C can be recognised by looking for the polar σ bond due to the presence of an electronegative substituent (esp. C-Cl, C-Br, C-I and C-O)
Nucleophilic substitution reactions are an important class of reactions that allow the interconversion of functional groups.
Of particular importance are the reactions of alkyl halides (R-X) and alcohols (R-OH)
For alcohols, the range of substitution reactions possible can be increased by utilising the tosylates (R-OTs), an alternative method of converting the -OH to a better leaving group.

nucleophilic substitution
- What are the three conditions for Nucleophilic substitution reactions to occur?
What does the term “nucleophilic substitution” imply ?
A nucleophile is an electron rich species that will react with an electron poor species<br></br>A substitution implies that one group replaces another.
Nucleophilic substitution reactions occur when an
electron rich species, the nucleophile,
reacts at an electrophilic saturated C atom attached to
an electronegative group (important), the leaving group
The electrophilic C can be recognised by looking for the polar σ bond due to the presence of an electronegative substituent (esp. C-Cl, C-Br, C-I and C-O)
Nucleophilic substitution reactions are an important class of reactions that allow the interconversion of functional groups.
Of particular importance are the reactions of alkyl halides (R-X) and alcohols (R-OH)
For alcohols, the range of substitution reactions possible can be increased by utilising the tosylates (R-OTs), an alternative method of converting the -OH to a better leaving group.

nucleophilic substitution
- How can an electrophilic saturated C atom can be recognised?
What does the term “nucleophilic substitution” imply ?
A nucleophile is an electron rich species that will react with an electron poor species<br></br>A substitution implies that one group replaces another.
Nucleophilic substitution reactions occur when an electron rich species, the nucleophile, reacts at an electrophilic saturated C atom attached to an electronegative group (important), the leaving group
The electrophilic C can be recognised by looking for the polar σ bond due to the presence of an electronegative substituent (esp. C-Cl, C-Br, C-I and C-O)
Nucleophilic substitution reactions are an important class of reactions that allow the interconversion of functional groups.
Of particular importance are the reactions of alkyl halides (R-X) and alcohols (R-OH)
For alcohols, the range of substitution reactions possible can be increased by utilising the tosylates (R-OTs), an alternative method of converting the -OH to a better leaving group.

nucleophilic substitution
- Nucleophilic substitution reactions are an important class of reactions that allow the ..?.. of functional groups
What does the term “nucleophilic substitution” imply ?
Nucleophilic substitution reactions are an important class of reactions that allow the interconversion of functional groups.
Of particular importance are the reactions of alkyl halides (R-X) and alcohols (R-OH)
For alcohols, the range of substitution reactions possible can be increased by utilising the tosylates (R-OTs), an alternative method of converting the -OH to a better leaving group.

nucleophilic substitution
Nucleophilic substitution reactions are an important class of reactions that allow the interconversion of functional groups.
- Of particular importance are the reactions of ..?….?.. and ..?..
What does the term “nucleophilic substitution” imply ?
Of particular importance are the reactions of alkyl halides (R-X) and alcohols (R-OH)
For alcohols, the range of substitution reactions possible can be increased by utilising the tosylates (R-OTs), an alternative method of converting the -OH to a better leaving group.

Some smooth muscle exhibits spontaneous contractile activity in the absence of either nerve or hormonal stimuli.
- Where in the body for example?
Some smooth muscle exhibits spontaneous contractile activityin the absence of either nerve or hormonal stimuli. The plasma membranes of these fibers do not maintain a stable resting membrane potential. Instead the resting membrane potential gradually drifts towards threshold where it triggers an action potential (Figure 49). Following repolarization the membrane again begins to depolarize. This is property is called pacemaker activity.
Pacemakers are found within the GI tract.
What are the differences between
MULTI-UNIT smooth muscle fibers
and
SINGLE UNIT smooth muscle fibers
SINGLE VERSUS MULTI-UNIT FIBERS
Smooth muscle fibers do not have a specific neuro-muscular junction. Instead as the autonomic nerve nears a bundle of smooth muscle, it divides into many branches each containing a series of swellings (called varicosities) filled with vesicles of neurotransmitters.
MULTI-UNIT smooth muscle fibers are innervated independently. The fibers are not connected by gap junctions. Depolarization of one fiber is followed by contraction of that fiber only. These fibers are richly innervated by the autonomic nervous system. Nervous stimuli and hormones cause contraction (or relaxation) of these fibers, not stretch. The smooth muscle of the lung airways, in the walls of large arteries, and attached to the hair of the skin are multi-unit fibers.
SINGLE UNIT smooth muscle fibers are connected by gap junctions. Depolarization of one fiber triggers synchronous depolarization throughout the bundle followed by contraction of the fiber bundle. That is, many fibers act as one sheet. Single unit fibers are found in the walls of small blood vessels, the GI tract, and uterus where stretching of one fiber creates a coordinated contraction
In smooth muscle does Ca++ regulate the thick filament or the thin filament?
In smooth muscle, coupling between the membrane action potentials and contraction is mediated by calcium ions (Ca++).
Calcium regulates the thick filament (myosin) to enable cross bridge formation and contraction.
How many of the cardiac muscle cells are conducting (the intrinsic pacemakers)?
CONDUCTING cardiac muscle cells are ~ 1% of the cardiac muscle cells.
These are large diameter cells that do not produce tension, instead they are specialized for excitation.
They constitute a network in the heart known as a conduction system.
They are connected to the contractile cells by gap junctions.
The conducting fibers are filled mostly with glycogen and have few myofilaments. These cells are the intrinsic pacemakers. We will deal with their action potentials in the next lecture.
What sort of muscle fibres are the contractile cardiac muscle cells?
CONTRACTILE cardiac muscle cells are slow oxidative muscle fibers.
These fibers form the walls of the heart, shorten and produce tension. They use glucose and fatty acids as substrates.
Acid-base
- Derive the Henderson-Hasselbalch approximation
starting with a buffer solution
HA H+ + A¯
pH = pKa + log ([A−] / [HA])
The Henderson-Hasselbalch approximation allows us one method to approximate the pH of a buffer solution
pH = pKa + log ([A−] / [HA])
HA is the acid, A- is the conjugate base
Acid-base
- What is the Henderson-Hasselbalch approximation used for?
- Write the equation
The Henderson-Hasselbalch approximation allows us one method to approximate the pH of a buffer solution
pH = pKa + log ([A−] / [HA])
HA is the acid, A- is the conjugate base
Cardiac muscle
- In cardiac muscle the action potential activates the C++ gates in the ???
ELECTRICAL – CONTRACTION (E-C) COUPLING
As in skeletal muscle, contraction in cardiac muscle is dependent on the entry of Ca++ from the T tubule (Figure 51).
Depolarization of the T tubule membrane opens the voltage gated Ca++ channels (dihydropyridine receptor), permitting the entry of a small amount of Ca++.
This Ca++ opens the Ca++ gated Ca++ channel (ryanodine receptor) on the sarcoplasmic reticulum (SR) thereby releasing a lot of Ca++ into the cytoplasm.
In turn, Ca++ binds to troponin which unmasks the actin (thin filament), cross bridges form, and shortening occurs.
With repolarization of the T tubule membrane, no further Ca++ enters the cells and the SR CaATPase removes Ca++ from the cytoplasm. This removal of Ca++ ends the contractile cycle and the muscle relaxes
Cardiac muscle
- Describe the three steps in the ELECTRICAL – CONTRACTION (E-C) COUPLING in cardiac muscle
ELECTRICAL – CONTRACTION (E-C) COUPLING
As in skeletal muscle, contraction in cardiac muscle is dependent on the entry of Ca++ from the T tubule (Figure 51).
- Depolarization of the T tubule membrane opens the voltage gated Ca++ channels (dihydropyridine receptor), permitting the entry of a small amount of Ca++.
- This Ca++ opens the Ca++ gated Ca++ channel (ryanodine receptor) on the sarcoplasmic reticulum (SR) thereby releasing a lot of Ca++ into the cytoplasm.
- In turn, Ca++ binds to troponin which unmasks the actin (thin filament), cross bridges form, and shortening occurs.
With repolarization of the T tubule membrane, no further Ca++ enters the cells and the SR CaATPase removes Ca++ from the cytoplasm. This removal of Ca++ ends the contractile cycle and the muscle relaxes
Describe the phases of ACTION POTENTIAL OF CONTRACTILE CARDIAC CELLS
(0-4)
ACTION POTENTIAL OF CONTRACTILE CARDIAC CELLS
The action potential of the contractile cardiac muscle fiber (Figure 52) is longer in duration (200-220 msec) than that seen in skeletal muscle (2 msec). In cardiac cells there are four phases to the action potential.
Phase 0, voltage gated Na+ channels open.
Phase 1, voltage gated Na+ channels inactivate and voltage gated K+ channels open.
Phase 2 (plateau), voltage gated Ca++ channels open and voltage gated K+ channels remain open.
Phase 3, only voltage gated K+ channels are open and cells repolarize.
Phase 4, all of the voltage gated channels are closed and the resting membrane potential is restored by the Na/K ATPase.
Note that the entry of Ca++ in phase 2 is essential for initiating contraction and triggering the opening of the Ca++ gated Ca++ release channel (ryanodine receptor).
One other point, each action potential results in one contraction. One contraction (twitch) is ~250 msec, almost the same duration as the action potential (200 msec). This is due to the prolonged plateau phase 2.
Cardiac muscle
- What is the absolute refractory period of cardiac muscle?
- How long does the action potential last?
- How long is a single contraction?
- What are the implications for tetanus of the heart muscle?
REFRACTORY PERIOD AND ABSENCE OF TETANUS
Absolute refractory period of the cardiac muscle action potential refers to the time interval when the voltage gated sodium channels are inactivated.
The absolute refractory period lasts ~180 msec.
The action potential lasts 200-220 msec.
A single contraction is 250 msec.
Recall that these voltage gated Na+ channels must undergo a conformational change from an “inactivated” state to a “closed” state before they can reopen and initiate another action potential. As a consequence of phase 2, the voltage gated Na+ channels remain “inactivated” for an extended period of time and do not “close” until repolarization in phase 3 (~180 msec). No amount of stimulus can cause an action potential during the absolute refractory period.
An important point regarding the refractory period is that contractions cannot sum and therefore there is no fused tetanus (summed contractions). Fused tetanus in the heart would lead to death as it would prevent the rhythmic pumping of blood.
After a skeletal muscle fiber is treated with a membrane permeable drug that speeds up the action of the SR Ca+2-ATPase, how would the first twitch differ?
the twitch would last longer
the twitch would be shorter
the twitch would last the same amount of time
the twitch would produce more tension
the twitch would be shorter
the SR Ca+2-ATPase pumps Ca++ back into the Sarcoplasmic Reticulum
After a skeletal muscle fiber is treated with a membrane permeable drug that speeds up the action of the SR Ca+2-ATPase, how would contraction differ after multiple and frequent action potentials?
A the maximal tension would be increased compared to an untreated fiber
B fused tetanus would be reached in the same amount of time as an untreated
fiber
C fused tetanus would be reached later than an untreated fiber
D fused tetanus would be reached sooner than an untreated fiber
C fused tetanus would be reached later than an untreated fiber
the SR Ca+2-ATPase pumps Ca++ back into the Sarcoplasmic Reticulum
Which of the following is the typical order of motor unit recruitment?
A slow-oxidative, fast-glycolytic, fast-oxidative
B slow-oxidative, fast-oxidative, fast-glycolytic
C fast-oxidative, slow-oxidative, fast-glycolytic
D fast-glycolytic, fast-oxidative, slow-oxidative
B slow-oxidative, fast-oxidative, fast-glycolytic
Skeletal muscle fibers are classified into one of three types distinguished by the speed of their myosin ATPase and preferred metabolism:
fast, glycolytic fibers fatigue quickly
fast, oxidative, glycolytic fibers resist fatigue
slow, oxidative fibers resist fatigue
Recruitment is the process of activating different types of muscle fibers within a fascicle in response to need. Recruitment starts with slow, oxidative fibers that do not provide a lot of force but can provide fine muscle control. If more tension is needed, fast-oxidative-glycolytic fibers can be recruited. Finally, fast, glycolytic fibers that fatigue rapidly increase tension the most dramatically are recruited.
Which of the following types of muscles have sufficient numbers of gap junctions between fibers to propagate action potentials between cells?
A both cardiac muscle and single-unit smooth muscle
B cardiac muscle only
C multi-unit smooth muscle only
D both cardiac muscle and multi-unit smooth muscle
E single-unit smooth muscle only
A both cardiac muscle and single-unit smooth muscle
Smooth muscle cells differ from skeletal muscle cells in that smooth muscle does NOT contain:
troponin–tropomyosin complexes
myosin ATPase activity
dense bodies
thin filaments
troponin–tropomyosin complexes
