Bacteriophages Flashcards

1
Q

What are the 4 types of phage classification

A

Ds dna

Ss dna

Ss rna

Ds rna

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2
Q

What happens to dna if it’s ssdna

A

Replicated then converted to mrna +

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3
Q

Name a ss dna phage

A

M 13

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4
Q

Why wouldn’t M13 ds dna show up as a PFU

A

Has no cytopathic effects

It is released without lysis

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5
Q

What is ss dna phages like M13 used for and why

A

Gene cloning as vectors

They have space in genome for the gene of interest

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6
Q

what is phage displaying usually done on ss dna like M13

A

It is insertion of the gene (cloning) to detect its function when infecting bacteria

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7
Q

Which phage is most common and give example

A

Ds dna

Eg T4

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8
Q

What is the advantage of SSRNA (+)

A

It doesn’t have to be converted to mrna as already sense

It can be translated straight away

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9
Q

What do Ss rna (-) phages use (different in viruses)

A

Use rna replicase converting it to + mrna

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10
Q

What allows a phage to attach

A

Tail fibres

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11
Q

Which enzymes allow entry into the bacteria and also exit

A

Lysozymes

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12
Q

What allows injection of nucleic acid into bacteria

A

Receptor recognising the phage

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13
Q

Which period can’t detect phage in it outside of the cell

A

Eclipse period

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14
Q

What is the lag phase in phage graphs

A

The bottom line

It is the period where the maturation of virion occur before lysing

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15
Q

What is the rise period

A

The exponential growth where the phage has lysed

Shown on graph

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16
Q

At what phase do PFU stop increasing (after rise period)

A

Plateau period

17
Q

What is the name for number of phages released from 1 cell

A

Burst size

18
Q

How do you work out burst size

A

PFU highest value / PFU lowest value

19
Q

Are T4 ds dna phages lytic?

20
Q

What happens to all of the dna when injected

A

Both host and phage dna are hydrolysed before assembly

21
Q

At what point does lysozyme production occur/ translation/ assembly

A

At the exponential phase - causes lysis

22
Q

What is the main lysogenic phage called

23
Q

What are lysogenic lamda phages good for

A

Transfer pathogenic/ virulence to the bacteria chromosome

24
Q

What is it called when the lysogenic lamda genome is incorporated to host chromosome

25
What is a lysogen
Phage which dna is replicated within the host chromosome as a prophage
26
Which protein in high numbers causes flip to the lysogenic phase
Cl protein
27
Which protein causes a flip to the lytic cycle
Cro protein
28
When would lysogenic cycle be favoured
If bacteria are in harsh conditions and not likely survive
29
Why can lamda phages be used for cloning alongside M13 (ss dna)
1/3 of its genome can be replaced with a gene of interest
30
Why is T7 used for cloning
They have a specific T7 rna polymerase which only works alongside specific promoters Used for manipulating expression of genes
31
Why can phages be used as alternative to antibiotics
Kill bacteria (phage therapy) And useful in stopping biofilms eg in toothpaste