BB Flashcards
(210 cards)
Ubiquinone
is the fully oxidized form of coenzyme Q, which participates in the electron transport chain in the mitochondrial membrane. Complex 2, takes e to C3
In genetic leakage, the hybrid offspring of two diff parental species must be ______
Fertile
Independent variable is _______ by scientists
manipulated
slope of a Lineweaver-Burk plot is equal to
the Km/Vmax ratio,
a decreased value for Km (decreased numerator) and an increased Vmax value (increased denominator) both contribute to a decreased slope.
DNA polymerase role in DNA repair
DNA polymerase helps the correct base to pair with the opposite strand, and a ligase enzyme catalyzes formation of new phosphodiester bonds
Endonuclease vs Exonuclease
the DNA backbone is cleaved by exonucleases (end of chain)
endonucleases cleave phosphodiester bonds within a strand (mid chain somewhere)
To assess how nitrogen base pairs match:
Hydrogen bond donors and acceptors must be aligned
A,T make two bonds
G,C make three
Proteins with ubiquitin tags are typically ___
targeted to the proteasome for destruction.
Gibbs is characterized by ____ actions, free energy decreases with each __ action
spontaneous
Competitive inhibitors bind ___ only
Uncompetitive inhibitors bind ___ only
Mixed inhibitors bind _____, though they may have a higher affinity for ____, or vice versa
Noncompetitive inhibitors are a special case of mixed inhibitor in which the affinities for E and ES are _____
Competitive inhibitors bind E only
Uncompetitive inhibitors bind ES only
Mixed inhibitors bind both E and ES, though they may have a higher affinity for E than for ES, or vice versa
Noncompetitive inhibitors are a special case of mixed inhibitor in which the affinities for E and ES are exactly equal
Chaperone proteins help in __
folding
What is a signal sequence and where is it never found?
tells mRNA where to go (like transmembrane protein to ER) usually to secretory pathway, never on functional proteins
DNA dispersive model of replication?
in which bases segregate randomly to daughter strands.
DNA made 5–>3 , What attaches to what?
1st nucleotide 3C hydroxyl attaches to 2nd nucleotide 5C phosphate hydroxyl
5’ UTR is _____ of promotor so it is _____
upstream
transcribed just not translated
A mature mRNA consists of ____
a 5’-cap (one base pair) the 5' UTR coding regions 3' UTR Poly(A) tail
Most compact structure in chromatin?
Nucleosomes more compact than any chromatin structure
Acetylation of histones involves the transfer of an ____, increasing gene expression by disrupting _____ between histones and DNA.
acetyl group to positively charged amino groups on lysine or arginine residues
Salt bridges
Why does GC have more pi stacking?
G-C has 3 bonds so less rotation, more stability, more pi stacking
DNA coding strand will always be ____ mRNA except with U instead of T
Same as, U instead of T
Describe Thymine and Uracil similarity and difference
both have 2 carbonyls and an amine group
T has a methyl as well
The molecular weight of dNMPs in decreasing order is dine (dCMP).
deoxyguanosine (dGMP), deoxyadenosine (dAMP), deoxythymidine (dTMP), and deoxycytidine (dCMP).
siRNA?
siRNAs are highly specific
synthesized to reduce the translation of specific messenger RNAs (mRNAs)–> reduce the synthesis of particular proteins
form from double-stranded RNA transcribed and then cut to size in the nucleus before releasing into the cytoplasm.
For nucleotides, Tm is ____
is temp at which 50% of dsDNA unfolded to ssDNA