Bio/Biochem Questions Flashcards

(52 cards)

1
Q

when does removal of introns occur?

A

DNA –> mRNA

pre mRNA processing

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2
Q

electron carriers in the electron transport chain

A

cytochrome c: 1 electron carrier (cycles between ferrous and ferric state)
Complex I/NADH dehydrogenase complex: 2 electrons to ubiquinone, 4 H+ across the membrane
Complex III: 2 electrons to cytochrome c
Complex IV: 4 electrons from cytochrome c
O2: final electron acceptor, creates 2 molecules of water

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3
Q

what type of primer is most suitable for PCR?

A

suitable primers have a high GC content and have G or C base pairs at the 5’ and 3’ ends

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4
Q

nondisjunction

A

failure of homologous chromosomes to separate during anaphase I of meiosis OR the failure of sister chromosomes to separate during anaphase II of meiosis

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5
Q

why would protein synthesis be inhibited by D-alanine?

A

only L isomers of amino acids are used to form proteins during ribosomal protein synthesis

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6
Q

is growth rate faster under aerobic or anaerobic conditions?

A

aerobic
a much greater amount of ATP is produced to provide energy for reproduction (net 38 ATP vs net 2 ATP per molecule of glucose)

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7
Q

euchromatin vs heterochromatin

A

euchromatin is transcriptionally active while heterochromatin is not

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8
Q

actin filaments are

A

microfilaments

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9
Q

products of fermentation

A

pyruvic acid and glucose 6 phosphate (and other glycolysis intermediates) can still be produced
lactic acid or ethanol
acetyl coA will not be produced in anaerobic conditions

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10
Q

introduction of which amino acid substitution would result in the largest decrease in the entropic penalty associated with a protein folding into its native conformation?

A

Leu to Thr substitution at a surface-exposed site

switching a hydrophobic residue for a hydrophilic residue eliminates the entropic penalty associated with ordered water molecules around hydrophobic groups

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11
Q

germ layers

A

endoderm - epithelial tissues inside the body (digestive and respiratory tracts), bladder, liver, pancreas
mesoderm - bone, muscle, heart and circulatory system, internal sex organs
ectoderm - nervous system, dermis, hair, nails, eyes, ears, mouth, brain

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12
Q

bacterial vs. human cells

A

humans do not have a cell wall
they differ in ribosome units (eukaryotes have larger subunits) - 80S vs 70S in bacteria
bacterial DNA is circular
both use ATP synthase to make ATP

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13
Q

what hormone triggers ovulation?

A

luteinizing hormone

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14
Q

if a mutation in an intron affects the expression of an exon, the intron is likely to contain

A

splice receptor site

alternative splicing leads to changes in exon expressions

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15
Q

mature mRNA is not likely to contain:

A

introns

promoter sequences

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16
Q

transmembrane proteins are likely to contain:

A

signal sequence

facilitates transmembrane protein docking at the endoplasmic reticulum

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17
Q

during which step of cellular respiration is NADH neither oxidized nor reduced?

A

chemiosmosis

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18
Q

where is glomerular filtrate most concentrated?

A

medullary portion of the collecting duct

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19
Q

function of Na+ K+ ATPase during an action potential

A

restores resting potential by moving ions against their concentration gradient
3 sodium ions out of the cell, 2 potassium ions into the cell

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20
Q

resting membrane potential

A

more potassium ions inside than outside, more sodium ions outside than inside
-40 to -90 mV (negative)
to restore resting potential: 3 sodium ions out of the cell, 2 potassium ions into the cell

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21
Q

action potential: depolarization

A

cell becomes more +
positive ions enter the cell, Na+ enters through voltage-gated sodium channels
cell ends up extra positively charged (not neutral)

22
Q

action potential: repolarization

A

cell becomes - again
positive ions leave the cell (Na+ channels close so no new sodium ions can enter, K+ channels open so potassium ions can leave)

23
Q

action potential: hyperpolarization

A

after an action potential, cell becomes extra negatively charged because extra potassium ions leave the cell
sodium-potassium pump reestablishes resting potential

24
Q

what enables a molecule to pass directly through the cell membrane?

A

small molecule
hydrophobic molecule
planar molecule

25
ABC transport protein
uses ATP to actively transport antitumor drugs out of the cell
26
lipid raft
cholesterol or steroid rich domain
27
the initial filtration step in the glomerulus of the kidney occurs by
passive flow due to pressure difference | blood pressure is the initial driver behind glomerular filtration
28
insulin in the liver
aids glucose uptake by decreasing the cellular concentration of glucose
29
where are proteins cleaved after translation?
endomembrane system | leave the ribosome before being cleaved into active form
30
DNA replication is semiconservative
2 copies of the original molecule are made during replication --> each new molecule will contain 1 original strand and 1 newly synthesized strand
31
purines and pyrimidines
purines - adenine and guanine, 2 rings | pyrimidines - cystine and thymine/uracil, 1 ring
32
what happens to an action potential if potassium channels are blocked?
action potential is prolonged | repolarization requires opening of potassium channels so K+ can exit the cell
33
nuclear localization sequence
allows proteins to be translocated to the nucleus eg an enzyme that activates expression of a gene activates transcription factors for that gene, and transcription factors are found in the nucleus, so that enzyme would likely contain a nuclear localization sequence
34
ubiquitination
targets a protein for degradation by a proteasome | posttranslational process
35
Western blot
analyzes posttranslational modifications of proteins such as histone acetylation
36
Southern blot
used to detect specific DNA sequences in DNA samples pretranslational unlike Western blot relies on palindromic restriction sites eg AAGCTT
37
vasopressin regulates the insertion of aquaporins into the apical membranes of the epithelial cells of which renal structure?
collecting duct
38
blood from the small intestine is transported first to the
liver
39
endosome
facilitates internalization of viral particles by endocytosis
40
sperm
produced in the seminiferous tubules of the testes | complete maturation and become motile in the epididymis
41
why add a reducing agent to SDS-PAGE?
reducing agent removes disulfide bonds | allows monomers to run separately
42
amino acid likely to be phosphorylated
serine
43
influx of Na+ across the motor end plate
involves ligand-gated ion channel | sodium ion channels bind the ligand acetylcholine to trigger action potential in muscle fibers
44
the Doppler effect
person hears a higher frequency before passing the source, then a lower frequency after passing the source f'>f to f' higher frequency moving away from observer --> lower frequency
45
enzyme specific for peptide bonds
proteases and hydrolases
46
operon containing two genes in a prokaryotic cell
single mRNA transcribed from a single promoter sequence upstream of the first gene in the operon
47
histone acetylation
typically promotes transcription by modifying chromatin structure something that inhibits histone acetylation would inhibit transcription by condensing chromatin structure
48
restriction enzymes recognize
palindromic sequences
49
complex II is the same as
succinate dehydrogenase
50
imprinted genes
expressed in a parent-specific manner (eg passed down maternally or paternally) but are not X or Y linked
51
glomerulus structure
prevents the entry of large molecules such as proteins into the filtrate
52
filtrate in the nephron
Bowman's capsule --> proximal tubule --> loop of Henle --> distal tubule --> collecting duct