Block 3 Flashcards

(344 cards)

1
Q

how does a nucleoside differ from a nucleotide

A

nucleoside- sugar+base
nucleotide- sugar+base+phosphate

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2
Q

where are new nucleotides made

A

liver cytoplasm

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3
Q

how are new nucleotides transported

A

by RBC

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4
Q

what is the starting molecule for nucleotide synthesis

A

ribose 5-phosphate

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5
Q

how does purine synthesis differ from pyrimidine synthesis

A

purine- create base then add sugar
pyrimidine- make sugar then build base

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6
Q

what is the first step of purine synthesis

A

addition of 2 phosphates from ATP to ribose 5-phosphate to make PRPP (phospho ribosyl pyro phosphate)

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7
Q

what enzyme catalyzes the first step of purine synthesis, adding 2 phosphates from ATP to ribose 5-phosphate

A

PRPP synthetase (phospho ribosyl pyro phosphate

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8
Q

PRPP synthetase in purine synthesis is inhibited by what molecules

A

GDP and ADP

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9
Q

what enzyme is involved in the second step of purine synthesis, adding amine from glutamine to PPRP

A

phosphoribosyl amido transferase

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10
Q

what is glutamine phosphoribosyl amino transferase (PRAT) of purine synthesis inhibited by

A

IMP, GxP, AxP

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11
Q

allopurinol is an indirect target of __ but a direct target of __

A

indirect- PRAT
direct- xanthine oxidase

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12
Q

what 3 amino acids are involved in purine production

A

glycine, glutamine, asparatate

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13
Q

how does methotrexate act as an anticancer drug

A

inhibits DHFR and tetrahydrofolate production, preventing addition of carbons to the purine ring, inhibiting cell growth

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14
Q

in purine synthesis, what is the common molecule before the branchpoint into ATP and GTP

A

IMP

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15
Q

what enzyme converts IMP to GMP

A

IMP dehydrogenase

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16
Q

what reversibly inhibits IMP dehydrogenase, inhibiting IMP to GMP

A

mycophenolic acid

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17
Q

IMP+___= AMP

A

asparatate

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18
Q

IMP+___= GMP

A

glutamine

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19
Q

what are the 2 products of the purine nucleotide cycle

A

NH3 (to urea cycle)
fumarate (to TCA cycle)

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20
Q

what accounts for maintaining balance between AMP and GMP production

A

IMP+GTP+aspartate= AMP
IMP+ATP+glutamine= GMP

*production of one type of nucleotide requires the other type as an energy source

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21
Q

what does adenylosuccinate synthetase of purine synthesis do

A

makes AMP from IMP

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22
Q

what is adenylosuccinate synthetase inhibited by

A

AMP

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23
Q

what does IMP dehydrogenase of purine synthesis do

A

make GMP from IMP

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24
Q

what is IMP dehydrogenase of purine synthesis inhibited by

A

GMP

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25
regulation of purine production in liver cells is inhibited by ___
high levels of ATP and GTP
26
for DNA synthesis, we need ___ nucleotides
deoxy-ribose
27
what enzyme converts nucleotides to deoxynucleotide which are needed for DNA synthesis
ribonucleotide reductase
28
what activates ribonucleotide reductase, the enzyme needed to convert nucleotides to deoxynucleotides what inhibits it
ATP dATP (deoxyATP)
29
what is an alternative way to make purines, instead of synthesis in liver cells
salvage them from the diet
30
AMP is degraded to __ GMP is degraded to __
hypoxanthine guanine *both are released into blood
31
if ingested nucleotides are not salvaged from the diet and converted to nucleosides, they are converted to __
uric acid
32
since uric acid is not very water soluble, it is released into the blood and forms __
crystal
33
excessive uric acid in the blood can lead to __
gout
34
what is the effect of allopurinol inhibiting xanthine oxidase
decreased uric acid, buildup of hypoxanthine= increased A and G= inhibit purine synthesis
35
what is the effect of APRT (adenosine phosphoribosyl transferase) deficiency
increase adenosine= increased crystallization= increased kidney/urinary stones
36
what is the effect of adenosine deaminase deficiency
deficiency of B and T cells= SCIDS (severe combined immunodeficiency) causes pyrimidine starvation
37
what is the effect of HGPRT (hypoxanthine guanine phosphoribosyltransferase) deficiency
guanine isn't converted to GMP+IMP= no guanine recycling= 100% excretion as uric acid= Lesch-Nyhan disease
38
what are the 3 starting molecules for pyrimidine synthesis
glutamine, CO2, ATP
39
the first step of pyrimidine synthesis which converts glutamine to carbamoyl phosphate is achieved by what enzyme
carbamoyl phosphate synthetase II
40
carbamoyl phosphate + ____ -->orotate (orotic acid)
aspartate
41
orotate is converted to UMP through the addition of __
PRPP
42
what is the result of deficiency of the enzyme that converts orotate to UMP in pyrimidine synthesis
orotic aciduria
43
in pyrimidine synthesis, UDP can be converted to __ or __
UTP dUDP
44
in pyrimidine synthesis, UTP is converted to CTP through the addition of what amino acid
glutamine
45
dUMP is converted to dTMP by what enzyme in pyrimidine synthesis
thymidylate synthase
46
what enzyme converts UDP to dUDP in pyrimidine synthesis
ribonucleotide reductase
47
what molecule is needed to convert dUMP to dTMP in pyrimidine synthesis
folate
48
FH2-->FH4 for dUMP-->dTMP in pyrimidine synthesis involves what enzyme
dihydrofolate reductase (DHFR)
49
what amino acids contribute CH3 needed for folate synthesis
serine or glycine
50
the nitrogen atoms of a pyrimidine ring come from what 2 amino acids
glutamine aspartate
51
methotrexate targets what enzyme
dihydrofolate reductase
52
5-fluro-uracil targets what enzyme of pyrimidine synthesis
thymidylate synthase
53
ribonucleotide reductase is targeted by what anti-cancer drug
hydroxyurea
54
carbamoyl phosphate synthase II of pyrimidine synthesis is activated by ___
PRPP
55
carbamoyl phosphate synthase II of pyrimidine synthesis is inhibited by ___
UTP
56
orotic aciduria can be caused by OTC deficiency in the uric acid pathway or by pyrimidine synthesis malfunction. how do you differentiate which it was caused by
high orotic acid+normal N= pyrimidine synthesis malfunction high orotic acid+low N= OTC deficiency
57
what are 8 peptide hormones that use Gs of GPCR
Angiotensin II FSH LH ACTH TSH Catecholamines (beta receptors) ADH (vasopressin II) PTH
58
what are 4 peptide hormones that use Gq of GPCR
vasopressin I oxytocin catecholamines (alpha-1 receptor) angiotensin II
59
what are 2 peptide hormones that use RTK/MAP kinase pathway
insulin insulin-like growth factor (IGF-1)
60
what are 3 peptide hormones that use RTK/JAK-STAT pathway
growth hormone prolactin cytokines
61
what are 2 peptide hormones that use guanyl cyclase pathway
brain natriuretic peptide (BNP) atrial natriuretic peptide (ANP) NO also uses this pathway
62
steroids use what receptor type
intracellular cytoplasmic
63
thyroid hormone, vitamin A, vitamin D, and fatty acids use what receptor type
intracellular nuclear
64
Cholera toxin is a ___ activator
cAMP
65
pertussis toxin is a ___ activator
PKA
66
how does cholera toxin work
locks Gs in its GTP form, keeping Cl- channels open (efflux of Cl/Na/H2O)
67
how does pertussis toxin work
inhibits activity of Gi, keeping PKA active
68
how do antihypertensive drugs work
increase cGMP, leading to vasodilation
69
where are steroid hormones synthesized
mitochondria/SER
70
what are the 5 releasing hormones released by the hypothalamus
TRH CRH GnRH GHRH MS-RH (melanocyte stimulating release hormone)
71
what are the 3 inhibitory hormones released by the hypothalamus
GHIH (somatostatin) dopamine MIH
72
what is the difference between tropic and nontropic hormones
tropic- stimulate other glands to secreter hormones nontropic- directly affect the target cell
73
what are the 4 tropic hormones released by the anterior pituitary
ACTH TSH LH FSH
74
what are the 3 nontropic hormones released by the anterior pituitary
GH MSH prolactin
75
growth hormone increases __ utilization and __ synthesis, and decreases __ utilization
fat utilization protein synthesis carbohydrate utilization
76
what are the 2 hormones released by the posterior pituitary
oxytocin ADH
77
what is the main function of ADH
reabsorb H2O from urine
78
besides water balance, ADH also functions to maintain __
blood pressure through vasoconstriction
79
neurogenic/central diabetes insipidus occurs due to __, while nephrogenic diabetes insipidus occurs due to __
neurogenic/central= decrease in ADH secretion-->high plasma osmolarity nephrogenic= defective ADH receptors-->high plasma osmolarity
80
is T3 or T4 metabolically active
T3
81
is T4 converted to T3, or is T3 converted to T4
T4-->T3
82
does thyroid hormone increase or decrease lipolysis
increase
83
thyroid hormone upregulates metabolism of what
carbs fats proteins
84
what enzymes convert free T4-->active and inactive T3
deiodinases
85
what causes gigantism
increase in GH prior to adolescence
86
what is the effect of gigantism
increase in longitudinal bone growth hyperglycemia
87
what causes acromegaly
an increase in GH and IGF after puberty
88
what is the effect of acromegaly
large gaping teeth large hands/feet kyphosis transverse bone growth
89
what causes African pygmies or Levi Lorain dwarves
defective GH receptor-->deficiency in IGF-1
90
what causes diabetes insipidus
Decreased ADH production-->high plasma osmolarity/dilute urine In diabetes insipidus, the lack of production of ADH means the kidneys cannot make enough concentrated urine and too much water is passed from the body
91
what are the symptoms of neurogenic/central diabetes insipidus
excessive thirst dilute urine hypotension
92
what is the result of neurogenic/central diabetes insipidus in terms of ADH
decrease in ADH secretion
93
what causes neurogenic diabetes insipidus
decreased ADH secretion due to decreased osmoreceptor function
94
syndrome of inappropriate ADH is causes by an increase or decrease in ADH secretion
increase
95
what are the symptoms of syndrome of inappropriate ADH
edema vasoconstriction hypertension congestive heart failure
96
primary hypothyroidism results from __
loss of thyroid tissue
97
what is the effect of primary hypothyroidism
low T3/T4 high TSH high TRH
98
secondary hypothyroidism results from __
reduced TSH secretion from the anterior pituitary
99
what is the effect of secondary hypothyroidism
low T3/T4 low TSH high TRH
100
tertiary hypothyroidism results from __
low TRH from the hypothalamus
101
what is the effect of tertiary hypothyroidism
low T3/T4 low TSH low TRH
102
what is myxedema
severe hypothyroidism
103
what are the symptoms of myxedema
painless goiter hypoxia hypoventilation fluid/electrolyte inbalance hypothermia shock/death
104
what is Hashimoto's thyroiditis
autoimmune disorder with loss of thyroid tissue due to anti-thyroperoxidase antibodies
105
congenital thyroid insufficiency is hypothyroidism in infants that can result from absence leading to __ and __ or low thyroid leading to __
absence-->hypotonia-->floppy baby syndrome low thyroid-->dwarfism/mental disability
106
what causes cretinism seen in children
lack of dietary iodine-->decreased T3/T3--> increased TSH
107
what are the symptoms of cretinism
goiter enlarged longue reduced skeletal growth
108
what causes endemic colloid goiter
lack of dietary iodine in adults-->decreased T4/T3-->high TSH
109
hyperthyroidism leads to hyper__ and hypo__
hyperlipidemia hypocholesterolemia
110
what is Grave's disease
hyperthyroidism the patient's immune system makes a thyroid-stimulating immunoglobulin (TSI) antibody that attaches to the thyroid cells. TSI acts like thyroid-stimulating hormone (TSH), causing the thyroid to make too much thyroid hormone
111
what are the symptoms of Grave's disease
bilateral exopthalmos orange peel skin non-pitting pretibial myxedema goiter
112
what is the effect of multinodular toxic goiter
malignant thyroid nodules overproducing T3/T4
113
what is the difference between a hot and cold nodule produced with goiters
hot= can trap iodine cold= can't trap iodine
114
what causes goiters
increased TSH receptor stimulation
115
hyperthyroidism causes a __ in serum glucose hypothyroidism causes a __ in serum glucose
hyper= increase hypo= decrease
116
each gram of fat contains how many calories
9
117
each gram of carbohydrate contains how many calories
4
118
each gram of protein contains how many calories
4
119
what are the building blocks of muscle mass
protein
120
when do we have a positive nitrogen balance
when demands of protein are high ex: growing children pregnancy recovery from illness body building
121
when do we have a negative nitrogen balance
when nitrogen (protein) output is greater than nitrogen (protein) intake ex: burns trauma illness starvation poorly controlled diabetes mellitus surgery cancer
122
___ are the favored energy source for burn patients
carbohydrates
123
why are carbohydrates (glucose) the favored energy source for burn patients
carbs promote wound healing and impart a protein sparing effect
124
what does it mean in saying carbohydrates promote a protein sparing effect
proteins are spared from gluconeogenesis in order to help rebuild muscle
125
following a burn, intravenous infusions of what increase nitrogen balance and muscle growth
glucose+amino acids (protein)
126
what state upregulates ubiquitin dependent proteolysis
starvation
127
what 3 things are given to a burn patient through IV
protein glucose(can also say carbs) to spare proteins from gluconeogenesis towards muscle building insulin (maintains blood sugar)
128
what nonenergy-dependent degradative enzymes perform protein degradation in the lysosomes
acid hydrolases
129
after proteosome activity, proteolysis occurs to break peptide fragments to amino acids. once the amino group is removed, what remains is called the ___
carbon skeleton
130
impairment of the ubiquitin-proteasome system can contribute to the development of what 2 neurogenerative disorders
Parkinson's Alzheimer's disease
131
mutation in what 3 genes is associated with Parkinson's disease
Parkin PINK1 DJ-1
132
the first point of breakdown of exogenous proteins occurs where, by what enzyme
stomach with pepsin+HCl
133
what is the function of HCl in the stomach in regards to protein degradation
allows for activity of pepsin to denature proteins to their primary structure (breaks H binds, not peptide), allowing for a more linear structure for proteases to act on
134
what are zymogens
inactive forms of an enzyme
135
what makes zymogens inactive
they contain an extra amino acid in their sequence, preventing proper folding, therefore making them inactive
136
what allows for a zymogen to become active
removal of amino acids to permit for proper protein folding
137
what suffix indicates a zymogen
-ogen
138
where in the protein structure does pepsin hydrolyze proteins
bonds adjacent to aromatic amino acid residues (phenylalanine, tyrosine, tryptophan)
139
the next enzyme to act on proteins after pepsin activity is __ in the __
trypsin small intestine
140
where in the protein structure does trypsin hydrolyze proteins
bonds adjacent to arginine or lysine (basic amino acids)
141
the release and activation of pancreatic zymogens is mediated by the secretion of __ by __ cells of the ___ in response to ___
cholecystokinin I cells duodenum and jejunum ingestion of AA and FA
142
the final step of protein degradation is the release of free AA and smaller peptides due to the activity of what enzyme located in the luminal surface of the intestine
aminopeptidase
143
what allows for the uptake of free amino acids in the enterocytes
Na+ linked secondary transport
144
dipeptides and tripeptides can cross the luminal surface into the intestinal cell, however on __ can cross into the blood
amino acids
145
cystinuria is a genetic disorder that affects the transmembrane transport of what amino acids
basic cysteine ornithine arginine lysine
146
cystinuria is due to a defect in what type of amino acid absorption
absorption of basic amino acids
147
what is the main amino acid that causes cystinuria
cysteine
148
since basic amino acids aren't easily absorbed from proximal convoluted tubule, they can accumulate and lead to ___
calculi (kidney stones)
149
what causes nephrolithiasis in regards to protein/AA transport
increase in cysteine due to the inability to be absorbed leads to recurrent stones in urine
150
what are 3 main symptoms of cystinuria
flank pain hematuria stones
151
Hartnup disease is caused by impaired transport of what amino acids
neutral, especially tryptophan
152
Hartnup disease is caused by impaired transport of tryptophan in what 2 body sites
small intestine proximal convoluted tubule of kidney
153
tryptophan can be converted into what 3 molecules
melatonin serotonin niacin
154
pellagra is a condition similar to Hartnup disease based on presentation and cause. how can they be differentiated
pellagra does not cause a buildup of tryptophan in the urine hartnup disease causes an increase in tryptophan (neutral amino acids) to be excreted in urine due to impairment of it's reabsorption transporter
155
what are the 4 main symptoms of Hartnup disease
pellagra-like rash neurological symptoms (dementia) diarrhea neutral aminoaciduria
156
what is the treatment of Hartnup disease
high protein diet with daily niacin (high protein diet/tryptophan rich diet with neutral AA+niacin)
157
in amino acid degradation, the amino group is used in what process
urea cycle
158
in amino acid degradation, the carbon skeleton is used for __ and __
gluconeogenesis oxidation in Krebs cycle
159
what is the first step in AA degradation
removal of nitrogen (amino group)
160
alpha-keto... means it is an amino acid without what group
NH3
161
what occurs in transamination
transfer of -NH3 from one amino acid to another
162
most excess nitrogen is converted to __ in the __
urea liver
163
before being excreted, excess nitrogen is converted to urea in the liver and through the blood to the ___
kidneys
164
what enzyme removes -NH3 from amino acids
aminotransferases
165
aminotransferases, which transfer the -NH3 group of an amino acid, use what as a coenzyme
B6 (pyridoxal phosphate)
166
in amino acid breakdown, the effect of transamination reactions is to collect the amino groups from different amino acids in the form of _____
L-glutamate
167
in __, glutamate is transported from the cytosol into the mitochondria where it undergoes oxidative deamination
hepatocytes
168
what enzyme performes oxidative deamination in AA degradation
L-glutamate dehydrogenase
169
where is L-glutamate dehydrogenase found
hepatocyte mitochondrial matrix
170
what is the only enzyme that can use either NAD+ or NADP+
L-glutamate dehydrogenase
171
the common collector amino acid for -NH3 everywhere is __ the common collector amino acid for -NH3 in muscle is ___
everywhere= glutamate muscle= alanine
172
the Cori cycle is used for what 2 processes
gluconeogenesis AA salvage
173
the common collector amino acid for NH3 is ___
glutamate
174
what amino acid transports NH3 in cases of hyperammonemia
glutamine
175
what pair of enzymes is involved in detoxifying/capturing/deaminating ammonia
glutamate dehydrogenase glutamine synthetase
176
what enzyme protects neurons from ammonia toxicity
glutamine synthase
177
elevated ammonia during hyperammonemia has the most toxic effects on what organ
brain
178
what are the 2 main functions of glutamine
protection from hyperammonemia maintain acid/base balance through the kidney bicarbonate buffer system
179
under acidic conditions, the liver diverts glutamine to the __ in order to maintain the pH of blood
kidneys
180
during metabolic acidosis, H+ combines with NH3 to form __ which is ultimately excreted in the urine
NH4+
181
ammoniagenesis involves formation of what
glutamine
182
what enzyme is found in the kidneys that allows it to deaminate glutamine to produce NH3+ and glutamate
glutaminase
183
what induces the action of glutaminase in the kidney
chronic acidosis
184
altered levels of AST and ALT indicate disfunction of what organ
liver
185
what is the main end product of protein (nitrogen) catabolism
urea (blood urea nitogen)
186
what is the main end product of purine catabolism
uric acid (urate)
187
what is the main end product of heme catabolism
bilirubin
188
what is the function of the urea cycle
convert toxic nitrogen to urea for excretion in the kidneys
189
the first 2 reactions of the urea cycle occur in the ___, while the rest of the steps occur in the ___
mitochondrial cytosol
190
carbamoyl phosphate synthetase I is involved in ___, while carbamoyl phosphate synthetase II is involved in __
urea pyrimidine
191
carbamoyl phosphate synthetase I is found in ___, while carbamoyl transferase II is found in __
I= mitochondrial matrix II= cytosol
192
transport of ornithine into the mitochondria and citrulline out into the cytosol is performed by what mechanism
antiporter
193
the urea cycles requires the input of how many ATP molecules
3
194
urea is composed of how many nitrogen
2
195
where do the 2 nitrogen of urea come from
1 from free NH3 that was captured 1 from aspartate
196
what acts as an additional activator of N-acetylglutamate in the urea cycle
arginine
197
what molecule acts as an allosteric activator of carbamoyl phosphate synthetase I
N-acetylglutamate
198
what is the rate limiting enzyme of the urea cycle
carbamoyl phosphate synthetase I
199
what activates carbamoyl phosphate synthetase I of the urea cycle
N-acetylglutamate (NAG)
200
what are the 2 main symptoms of hyperammonemia
flopping tremors (asterixis) cerebral edema
201
what enzyme is deficient in congenital hyperammonemia type I
carbamoyl phosphate synthetase 1
202
what are the 3 symptoms of carbamoyl phosphate synthetase I
increase NH3 decreased BUN (urea) increased glutamine
203
what enzyme is deficient in congenital hyperammonemia type II
ornithine transcarbamoylase (OTC)
204
what are the lab findings of ornithine transcarbamoylase deficiency
increased carbamoyl phosphate orotic aciduria
205
what enzyme is deficient in citrullinemia
arginosuccinate synthase
206
what enzyme is deficient in arginosuccinic aciduria
arginosuccinase
207
what enzyme is deficient in hyperargininemia
arginase
208
what are the 3 main reasons why ammonia is toxic
glutamine is osmotically active= cerebral swelling decrease in glutamate= decrease in neurotransmitters inhibition of TCA cycle reduced production of ATP by brain
209
what is the main first line treatment for urea cycle disorders
protein restriction
210
how does lactulose help treat hepatic encephalopathy
it acts in GIT to capture NH3+ to make it insoluble to NH4, allowing for excretion in stool
211
how does lactulose help treat hepatic encephalopathy
it acts in GIT to capture NH3+ to make it insoluble to NH4, allowing for excretion in stool
212
what is phenylbutyrate used in treatment of
hyperammonemia
213
how does phenylbutyrate used for hyperammonemia work
it decreases the osmotic effect on the brain and allows for N secretion in the urine
214
hyperammonemia can be acquired through disease/failure of what 2 organs
liver (NH3 formation site) or kidneys (NH# secretion site)
215
how is it that recent GI bleeding causes an increase in nitrogen absorption in the gut
blood protein breaks down into amino acids which further break down in to NH3+ and C skeleton the NH3+ typically is converted to urea, however with hepatic disease, the NH3+ is not converted to urea
216
what are the 2 ketogentic AA
leucine and lysine
217
what enzyme deficiency causes type I hyperprolinemia
proline dehydrogenase
218
what enzyme deficient causes type II hyperprolinemia
glutamate gamma semialdehyde dehydrogenase
219
what symptom does a deficiency in an arginine catabolism enzyme lead to
atrophy of retina
220
what 7 amino acids enter the TCA cycle as acetyl CoA
tryptophan lysine phenylalanine tyrosine leucine isoleucine threonine
221
what amino acid loading is used to diagnose a deficiency in vit B6
tryptophan
222
what enzyme of tryptophan catabolism requires vit B6
kynureninase
223
when there is a deficiency in vit B6, tryptophan does not broken down to enter the TCA cycle. Instead, what does it form
xanthurenate
224
before phenylalanine is converted to fumarate (an intermediate of the TCA cycle), what amino acid does it form
tyrosine
225
what enzyme is deficient in phenylketonuria (PKU)
phenylalanine hydroxylase
226
phenylalanine is toxic to what organ
brain
227
what are the symptoms of phenylketonuria
musty body and urine odor
228
phenylketonuria results in an elevated concentration of what
phenylalanine
229
the musty odor that occurs in phenylketouria results from production of what
phenylpyruvic acid
230
the production of melanin produced by tyrosine through tyrosinase is inhibited by what
phenylketouria (excess phenylalanine)
231
what are the symptoms of phenylketouria
hypopigmentation of external and internal features (basal ganglie, substantia nigra, locus ceruleus) seizures musty body and urine odor
232
what are 2 screening/diagnosis methods for phenylketouria
enzyme function test blood/urine phenylalanine test 24-48 hours after birth
233
what is the treatment for phenylketouria
restriction of phenylalanine diet supplementation of tyrosine
234
if standard treatment for phenylketouria does not work, it may be suspected that there is a deficiency in what enzyme
dihydrobiopterin reductase
235
what are the lab findings of dihydrobiopterin reductase deficiency
high phenylalanine low dopamine (leads to neurological deterioration) high prolactin
236
is phenylalanine crossing the placenta beneficial to the fetus
no, phenylalanine acts as a teratogen
237
what is the effect of children born to mothers with untreated phenylketouria
they have symptoms of PKU even through they may be heterozygous for the PKU gene
238
what enzyme deficiency causes alkaptouria
homogentisate oxidase
239
what is the main symptom of alkaptoura
urine turns a dark brown/black color when exposed to air
240
in alkaptorura, what is produced in large amounts that is excreted, allowing for the production of dark urine when exposed to air
homogentisate (alkapton)
241
what are the symptoms of alkaptourina that are seen late in the disease
arthritis black tissue pigmentation (ochronosis)
242
since urine has to be exposed to air for appoximately 2 hours before turning black to diagnose alkaptouria, what may be added to the urine to speed up the reaction
ferric chloride
243
in methionine salvage, what are used as cofactors
B12 folate
244
in methionine breakdown, what is used as a cofactor
vit B6
245
what is the function of vit B12 in regards to folate
B12 activates folate to THF for use in our cells
246
in methionine recycling, what molecule acts as a methyl group donor
s-adenosyl methionine (SAM)
247
deficiency in what enzyme causes homocystinuria
cystathionine synthase
248
what accumulates with cystathionine synthase deficiency (homocystinuria)
homocysteine methionine
249
what is the treatment for homocystinuia
remove methionine and homocysteine from the diet supplement cysteine and B6
250
what are the 3 presentations of homocystinuria
marfanoid habitus lens subluxation thromboembolic events
251
marfans can present similar to homocystinuria, however __ presents at a younger age, __ patients eyes point downwards and inward, and __ presents with hyperextensible joints
homocystinuria= younger age homocystinuria= downward and inward marfan= hyperextensible joints
252
what is the treatment for homocystinuria
increase vit B6 and cysteine restrict methionine
253
branched chain amino acids (leucine, isoleucine, and valine) use what enzyme complex
branched chain alpha-keto acid dehydrogenase complex
254
maple syrup disease is a deficiency in what enzyme
alpha-keto acid dehydrogenase complex
255
what causes maple syrup disease
the branched chain amino acids are not broken down so they are increased in the urine
256
what are the symptoms of maple syrup urine disease
sweet, burnt smelling urine
257
in maple syrup urine disease, what is used as a cofactor
vit B1 (thiamine)
258
what 2 amino acids enter the TCA cycle as fumarate
phenylalanine tyrosine
259
leucine enters the TCA cycle as what
acetyl CoA
260
threonine, methionine, valine, and isoleucine enter the TCA cycle as __
succinyl CoA
261
propionic acid is converted to methylmalonic acid by what process
biotin dependent carboxylation
262
methylmalonyl CoA goes through what process to form succinyl CoA
isomerization
263
propionic acidemia is caused by a deficiency in what enzyme
propionyl CoA carboxylase
264
what occurs in the absence of propionic acid or methylmalonyl CoA
metabolic acidosis
265
what diet is needed for a patient with propionic acidemia
minimal valine, isoleucine, methionine, and threonine
266
what enzyme is deficient in methylmalonic acidemia
methylmalonyl CoA mutase/isomerase
267
what are the 4 main symptoms of methylmalonic or propionyl acidemia
metabolic acidosis hypoglycemia ketones hyperammonemia
268
what is the urine finding for propionic acidemia
no methylmalonic acid increased propionic acid
269
what is the urine lab finding for methylmalonic acidemia
increased methylmalonic acid increased propionic acid
270
if vit B12 is deficient molecule in the urine is the most indication will be present in the urine
methylmalonyl CoA
271
if biotin is deficient, what molecule will be present in urine
propionyl CoA
272
patients with what clinical features are highly suggestive of vit B12 deficiency
amenia with associated neurological deficits (disruption of myelin synthesis)
273
if folate is deficient, what molecule will be present in the urine
homocysteine
274
vit B12 deficiency results in the greatest deficit to what cells
rapidly dividing such as RBC THF is needed for folate synthesis for DNA synthesis
275
albinism is caused by a deficiency in what amino acid
tyrosine
276
albinism occurs due to a deficiency in what production
melanin
277
what are the 2 main symptoms of albinism
visual defects and photophobia skin cancer
278
what is ceramide produced from
serine and palmitoyl-CoA
279
the production of serotonin and dopamine from tryptophan occurs through what type of reaction
decarboxylation
280
what are 5 molecules produced from tyrosine
dopamine, epinephrine, norepinephrine, melanin, thyroid hormone
281
what 2 molecules produce heme
glycine succinyl CoA
282
what 3 molecules form creatine
glycine arginine SAM (methyl group donor)
283
how does creatine (muscle protein) become creatine phosphate, which eventually becomes creatinine which is secreted in the urine
creatine kinase phosphorylates creatine creatine phosphate spontaneously forms creatine
284
in creatine/creatinine, what molecule provides a reservoir of high energy phosphate
creatine phosphate
285
the rate of what molecule formation and secretion can be used to measure glomerular filtration rate
creatine
286
in diabetes induced nephropathy, is the ability to excrete creatine low or high
low
287
GABA is formed by what type of reaction
decarboxylation with vit B6
288
GABA is formed by decarboxylation of what amino acid
glutamate
289
histamine is formed by ___ of histidine (what type of reaction)
decarboxylation
290
histamine causes vaso___ and broncho___
vasodilation bronchoconstriction
291
is glutamate excitatory or inhibitory
excitatory
292
what is the glutamine activated calcium receptor of excitatory synapses
NMDA
293
is GABA excitatory or inhibitory
inhibitory
294
GABA is produced by __ through ___
glutamate decarboxylation
295
is glycine an inhibitory or excitatory neurotransmitter
inhibitory
296
what are the 3 catecholamines
dopamine norepinephrine epinephrine
297
serotonin is formed by what amino acid
tryptophan
298
catecholamines are formed by what amino acid
phenylalanine tyrosine
299
DOPA is the precursor to what molecule
dopamine
300
dopamine is the precursor to what neurotransmitter
norepinephrine
301
norepinephrine is the precursor to what neurotransmitter
epinephrine
302
in production of catecholamines, what enzyme and step requires Vit B6
dopa decarboxylase dopa-->dopamine
303
in production of catecholamines, what enzyme and step requires vitamin C
dopamine beta hydroxylase dopamine-->norepinephrine
304
in production of catecholamines, what enzyme and step requires SAM
phenylethanolamine N-methyltransferase norepinephrine-->epinephrine
305
what type of reactions involve tetrahydrobiopterin
hydroxylation
306
what type of reaction in neurotransmitter synthesis involves B6
decarboxylation
307
in Parkinsons, dopamine level is __ in Huntinntons, dopamine level is __ (increased or decreased)
Parkinsons- decreased Huntingtons- increased
308
what is the pharmacological treatment for Parkinsons
L-Dopa with a peripheral decarboxylase inhibitor (ex: Carbidopa)
309
there are 2 categories of dopa receptors, D1 like and D2 like. D1 like include D_, while D2 like include D_
D1= D1, D5 D2= D2, D3, D4
310
how do D1 like dopamine receptors differ from D2 like in terms of their signaling activity
D1= Gs coupled (increases cAMP) D2= Gi/G0 coupled (decreases cAMP)
311
what 3 conditions have to do with dopmine
parkinsons huntingtons schizophrenia
312
the hydroxylation reaction of dopamine to norepinephrine involves use of what 2 cofactors
copper and vitamin C
313
in the methylation step of neurotransmitter synthesis to produce epinephrine from norepinephrine uses what as a cofactor
SAM
314
what enzyme converts norepinephrine to epinephrine
phenylethanolamine-N-methyltransferase (PNMT)
315
what is the main symptoms of pheochromocytomas
hypertension
316
at what step in the neurotransmitter pathway from phenylalanine to epinephrine do neurons end at
norepinephrine
317
at what step in the neurotransmitter pathway from phenylalanine to epinephrine does the adrenal medulla end at
epinephrine (whole path)
318
what are the steps involved in converting tyrosine to melanin in melanocytes
tyrosine-->dope by tyrosine hydroxylase+Cu2+ Dopa-->melanin
319
what is the impact of cortisol on epinephrine production
cortisol increases gene expression of PNMT, lowing for greater conversion of norepinephrine to epinephrine
320
how is cortisol able to interact in the medulla with PNMT
cortisol from venous drainage goes through adrenal medulla
321
catecholamines are what type of receptor type
adrenergic
322
epinephrine acts mainly through what type of signal transduction
PKA (adenyl cyclase)
323
catecholamines are inactivated by what 2 enzymes
monoamine oxidase (MAO) catecholamine O-methyltransferase (COMT)
324
what does monoamine oxidase produce
NH4+
325
what is the effect of catecholamine O-methyltransferase
methylate norepinephrine and epinephrine
326
what is the end product of epinephrine and norepinephrine inactivation
vanillylmandelic acid (VMA)
327
what condition can be determined by high VMA in urine
pheochromocytoma (high epinephrine and norepinephrine)
328
what is the end product of dopamine inactivation
homovanillic acid (HVA)
329
what does high level of HVA indicate
huntingtons (high dopamine)
330
in the formation of serotonin, tryptophan is first __, then there is a ___ (what type of reaction)
hydroxylation decarboxylation
331
what is the parent molecule that forms melatonin in the pineal gland
seratonin
332
melatonin comes from the amino acid ___ melanin comes from the amino acid __
melatonin= tryptophan melanin= tyrosine
333
melatonin is found in the __ melanin is found in __
melatonin= pineal gland melanin= melanocytes
334
what is the final product of serotonin inactivation
5-hydroxindole acetic acid (5-HIAA)
335
serotonin mainly uses what type of receptors
GPCR
336
the exception of serotonin not using a GPCR is with the receptor __ which is __
5-HT3 ligand gates
337
what are the 3 clinical correlations with serotonin
depression migraines chemotherapy induced emesis
338
nitric oxide is made from what amino acid
arginine
339
what is the effect of using nitroglycerine tablets with patients with angine
it produced NO which acts as a vasodilator through the cGMP guanyl cyclase pathway
340
in purine production, what amino acids contribute N
glutamine, glycine, aspartate
341
in purine production what amino acid contributes C
glycine
342
in pyrimidine production what amino acid contributes C
aspartate
343
in pyrimidine production what amino acids contribute N
glutamine aspartate
344
can kidney stones form from purine or pyrimidine degradation
purine