cell differentiation Flashcards

1
Q

cell differentiation

A

process through which a cell undergoes changes in gene expression & gene activity to specialise & take on specific roles in an orgnaism.

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2
Q

cell lineage

A

series of successive cell types = from the zygote to a particular mature cell type

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3
Q

ES cell

A

embryonic stem cell; able to differentiate to any cell type

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4
Q

gene expression

A

synthesis of the product of a given gene; a protein/ functional RNAs like tRNA.
Involved transcription & for proteins translation.

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5
Q

household gene

A

gene expressed in nearly all cell types e.g. tubulin

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6
Q

luxury gene

A

gene expressed in only one or a few cell types

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7
Q

master gene regulator

A

TF that coordinately regulates many or all of the genes speifically expressed in a particular cell type

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8
Q

modulation (of gene expression)

A

a simple,reversible change in gene expression with no change to cell type

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9
Q

pluripotent

A

able to produce several functional cell types.
also used for ESCs that can produce cell types of all 3 germ layers

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10
Q

pioneer factors

A

TFs that can bind to condensed chromatin, remodel it and initiate cell fate and differentiation (master regulators e.g ; SOX2, OCT4, NANOG)

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11
Q

postnatal/ adult SCs

A

immature cell that can both divide to produce further cells like itself & differentiate to replace functional cells that are worn out or lost

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12
Q

precursor/progenitor cells

A

any immature cell type able to differentiate to other cell type/s

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13
Q

promoter

A

a stretch of DNA at the 5’end of a structural gene which regulates transcription of that gene by binding to certain TFs (proteins that regulate transcription)

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14
Q

terminal differentiation

A

production of a mature functional cell type that can’t divide e.g. neurons, skeletal, muscle, granulocytes

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15
Q

totipotent

A

able to produce all cell types of both body + extra embryonic parts e.g. placenta, membranes)

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16
Q

cell determination

A

process whereby cell fates becomes stable. followed by cell differentiation. when a cell chooses a particualr ‘fate’ it’s said to be ‘determined’.
implies stable change.

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17
Q

what is the endpoint of cell differentation?

A

wide variety of specialised cells

18
Q

what happens to dividing cells as we age?

A

decrease

19
Q

division of cells during cell determination

A

asymmetrical cell division due to differential distribution of cytoplasmic molecules (proteins or mRNAs) within a cell before it divides
- 2 daughter cells > different fates> different gene expression profile

20
Q

what causes cell determination?

A
  • inductive signals from neighbouring cells is most common cause
  • one group of cells influences development of another
21
Q

embryonic stem cells; totipotent or pluripotent SCs

A
  • derived from 4 or 5 day old human embryos in human blastocyst phase of development
22
Q

germ layers are made from what SCs?

A

totipotent ESCs that produce pluripotent ESCs that go on to differentiate into the endoderm, mesoderm and ectoderm

23
Q

adult stem cells

A
  • multipotent
  • give rise to various types of cells in the tissues they are in; tissue specific
  • function; cell turnover
  • low in tissues where low rate of cell turnover e,g. brain
24
Q

what are stem cell niches?

A

microenvironments where tissue specific stem cells are maintained

25
Q

what do these niches help to maintain?

A
  • secreted soluble signalling factors; GFs and cytokines
  • physical parameters; shear stress, tissue stiffness and topography
    -environmental signals; metabolites, hypoxia, inflammation
26
Q

haematopoietic stem cells (HSCs)

A

multipotent stem cells anchored to fibroblast-like osteoblasts of the marrow of long bones.
produce all blood cells & some immune system cells.
regular self-renewal

27
Q

mesenchymal stem cells (MSCs)

A

stromal cells found in bone marrow & other organs
poorly defined and heterogenous
don’t self renew very regularly but are multipotent
dont give rise to cartilage (chondrocytes), bone (osteoblasts), muscle cells (myocytes) and adipocytes.

28
Q

oligopotent stem cells

A

can differentiate into only a few cells and include myeblast stem cells that produce 3 types of WBCs; eosinophils, neutrophils, basophils

29
Q

what differentiates a skeletal muscle cell?

A
  • muscle actin
  • a-actinin
  • muscle myosin
  • muscle creatine kinase
  • myoglobin
30
Q

what differentiates a melanocyte?

A
  • tyrosinase
  • dopachrome tautomerase
  • myosin 5 a
  • melanocortin-1-receptor
31
Q

what do Klf4 and c-MYC do in ESCs?

A

cooperative factors that are highly expressed in ESCs and help maintain their pluripotency.

32
Q

function of cooperative factors

A

direct conversion of cell fate between differentiated cell states
e.g. fibroblasts + GATA4 = cardiomyocyes

33
Q

somatic cell nuclear transferase (SCNT)

A

artifical removal of uclear of a differntiated somatic cell & its placement in a denucleated egg cell

34
Q

what happens and what are the limitations?

A
  • introduced nucleus is reprogrammed by factors in egg cytoplasm
  • new egg behaves like a zygote (totipotent)
  • challenging and time consuming
35
Q

induced pluripotent stem cells (iPSCs)

A
  • pluroporent cells artificially produced from somatic cells
  • epigenetically reprogrammed into PSCs
  • can potentially produce almost all cells of the organism
36
Q

what is added to adult fibroblast cells to make them iPSCs?

A

yamanka’s cocktail

37
Q

what is in yamanka’s cocktail?

A

Oct3/4, SOX2, Klf4, c-MYC , NANOG, LIN28, Glis1

38
Q

OCT4 and Velychko et al.

A

often considered the most important factor in the mix show that although we know underexpression or removal of Oct4 = lack of differentiation, overexpression = epigenetic changes and deterioration in quality of iPSCs

39
Q

examples of iPSCs

A
  • cardiomyocytes
  • adipocytes
  • neural cells
  • pancreactic b-cells
40
Q

function/ use of iPSCs

A
  • gene therapy
  • regen.medicine / cell transplantation
  • model disease & drug screening